Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00706 | ATGATGGAAGAGGTCGAAGAAGCTAATAGGGAAGCTGTTGAGAGTTGTCATAAAGTGTTGAATCTCTTGACTGTGGCTTCCTCGTCTCAAGATCAGTTGAAGCTTAGGAGTCGTTTAATGGCGGAAACTGGAGACGCTGTGTTTAAGTTTAGGAAAGTTTTGTGTCTTCTTGATTCTTCTGGGTTGGGTCATGCAAGGGTCAGGAAAAAGAAGGTCAAGAACTTTTTGTTTAATTCCTCTTCTTCCCCTTTTCCTCTTCCCCAATCTTTGTTCTTAGAAACTTCTTCCCCTAATTGCAGAATGGACCTTCTCCAGGGCAGGAATTTGCAGATGGGTCCTCTTTGTTTGGGGAACCCATCTTTGGAATTGAACTCTAATGCCAAAAGTTGTTCAACCCAACAAATACAATCTCAATCTGCTGCTCTTTATCATCATCATCATCATCATCACTTGCTTCAGAACAGGGTGTTGTTGAACAATAATCCTAATCCTAATCCTCCACAGCCTGAAATGATGTATCTTAGGAGCAATAATGGCATTAACTTAAATTTTGATAGCTCTAGTTGCACACAACACACAATGTCATCCACTAGGTCGTTTATATCTTCCTTGAGCATTGATGGGAGTGTGGCTAGCTTGGATGGGAGTGCCTTTCATTTGATCGGGGCACCCCGGTCTTCCGATCAGAATTCGCATTCTAAGAGGAAGTGCAGTGGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGCAGTGGGAGATGTCACTGCTCAAAAAAGAGGAAACATAGAGTAAAGCGATCAATTAAGGTGCCCGCGATAAGTAACAAGCTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCACCTCACCCAAGAGGATACTATAAGTGCAGCAGCATGAGAGGCTGTCCAGCGAGGAAGCACGTCGAGCGGTGTCTCGAGGAACCTTCCATGCTCATTGTTACATATGAAGGTGAACACAACCATCCTAGAATACCTTCTCAACCTGCAAATACTTGA | 1050 | 43.62 | MMEEVEEANREAVESCHKVLNLLTVASSSQDQLKLRSRLMAETGDAVFKFRKVLCLLDSSGLGHARVRKKKVKNFLFNSSSSPFPLPQSLFLETSSPNCRMDLLQGRNLQMGPLCLGNPSLELNSNAKSCSTQQIQSQSAALYHHHHHHHLLQNRVLLNNNPNPNPPQPEMMYLRSNNGINLNFDSSSCTQHTMSSTRSFISSLSIDGSVASLDGSAFHLIGAPRSSDQNSHSKRKCSGRGEDGSVKCGSSGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIPSQPANT | 349 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6895715 | 6898193 | - | ClCG09G007630.1 | Cla09g00706 | 280126 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00706 | 349 | SMART | WRKY_cls | 281 | 341 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla09g00706 | 349 | Gene3D | WRKY domain | 266 | 343 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla09g00706 | 349 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 3 | 349 | IPR044810 | GO:0003700 | |
Cla09g00706 | 349 | MobiDBLite | consensus disorder prediction | 222 | 251 | - | - | |
Cla09g00706 | 349 | SUPERFAMILY | WRKY DNA-binding domain | 279 | 341 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla09g00706 | 349 | PANTHER | WRKY DNA-BINDING PROTEIN 21-RELATED | 3 | 349 | - | - | |
Cla09g00706 | 349 | Pfam | Plant zinc cluster domain | 234 | 279 | IPR018872 | - | |
Cla09g00706 | 349 | ProSiteProfiles | WRKY domain profile. | 276 | 342 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla09g00706 | 349 | Pfam | WRKY DNA -binding domain | 283 | 340 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00061 | Cla-Chr7:678123 | Cla09g00706 | Cla-Chr9:6895715 | 5.90E-133 | dispersed | |
Cla09g00706 | Cla-Chr9:6895715 | Cla03g00810 | Cla-Chr3:10213606 | 5.71E-28 | dispersed | |
Cla09g00705 | Cla-Chr9:6879887 | Cla09g00706 | Cla-Chr9:6895715 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61699 | PF03106 | WRKY | 3.50E-26 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00706 | - | - | csv:101216822 | 598.201 |