Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00744 ATGGATTCGGCGAGGAGTTGGTTTAATAAGCTTCAGCCAAGAGATAGGTTGAGGGGTTCTACGAAGAAGAAGGATAATAGTATGGGAGAGAATGAGGATGGTACTGCTACTGATCAAACGGATGAAGAAGCGCTTTCTAATATTACTAAGCAGAAGGTTGCTGCGGCAAAGCAGTATATTGAGAATCATTACAAGGAGCAAATGAAGAATCTGCAGGAGAGAAAGGAAAGACGAAATATATTGGAAAAGAAGTTGGCTGATGCTGATGTTTCTGAAGAAGATCAAAACAATTTACTTAAGTTCTTAGAGAAGAAGGAAACTGAATACATGCGCCTCCAAAGGCACAAAATGGGTGTTGATGATTTCGATTTACTAACAATTATTGGCAAAGGTGCTTTTGGGGAGGTTCGTGTTTGTAGAGAGAAGACTACAGGTCAGGTGTATGCTATGAAAAAGCTTAAAAAATCAGAGATGCTTCGAAGGGGCCAGGTGGAGCATGTGAGAGCTGAAAGAAATCTGCTTGCTGAAGTAGACAGCAACTGTATTGTGAAACTCTATTGTTCTTTTCAAGATGATGAGTTTCTTTATCTTATTATGGAGTACCTACCTGGTGGAGATATGATGACTTTATTGATGAGAAAGGATACTTTGACTGAAGATGAAGCAAGGTTTTACGTTGGAGAGATAGTTTTGGCTATTGAATCTATTCATAAGCACAATTACATTCATAGAGATATTAAGCCTGACAATTTGCTGCTTGATAAATTTGGGCACTTGAGACTCTCAGACTTTGGACTATGCAAACCGTTAGATTGCAGTACACTCCAAGAACAAGATTTTGATGTAGGGAGTGTCCGTAATGGAGCTGGACAAAGTGATGAGCGCAATGCAACTCCCCGTACTCAACAAGAGCAACTACAACATTGGCAGAAGAATCGAAGAATGCTTGCTTATTCAACAGTTGGAACACCAGATTATATTGCTCCAGAGGTTTTGTTGAAGAAAGGTTATGGCATGGAATGTGACTGGTGGTCACTTGGAGCTATTATGTATGAAATGCTTGTTGGCTACCCACCTTTTTACTCTGATGATCCAATGTCGACATGTCGGAAGATTGTGAACTGGAGAACTCATTTGAAGTTCCCTGACGAGGCAAAGCTGTCTCCCTTGGCAAAAGATCTCATCAGCAGACTACTATGCAATGTTAACCAGAGGCTTGGTACAAATGGCGCAGATGAAATTAAGGTTCATCCGTGGTTTGAAGGTACTGAATGGGATAGGCTATACCAAATGGAAGCTGCATTTGTTCCTGAGGTTAAAGATGAGCTAGACACTCAAAATTTCGAAAAGTTTGAAGAGTCTGACTCGCAAAGCAGTACTTCATCTAAAACTGGTCCATGGAGAAAGATGCTTTCATCGAAGGACATCAACTTCGTTGGATATACTTACAAGAACTTCGAAATTGTCAACGATTATCAATTGCCTGGGATGGCTGAATTGAAGAAAAAATGCAGCAAACCCAAAAGACCGTCAATCAAGTCACTCTTTGATGGCGAGTCGGAGGCAGCAGACACATCTGATACACACACACCTACTCATAGTCAGCAGAAGACTGAAGGTAGCTTTTCGAACTCAACAACATCTCCTAAACTGGATGAAGTTGAAATGGGGAAAGAGTCGATGTAA 1686 40.81 MDSARSWFNKLQPRDRLRGSTKKKDNSMGENEDGTATDQTDEEALSNITKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFDLLTIIGKGAFGEVRVCREKTTGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGEIVLAIESIHKHNYIHRDIKPDNLLLDKFGHLRLSDFGLCKPLDCSTLQEQDFDVGSVRNGAGQSDERNATPRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPDEAKLSPLAKDLISRLLCNVNQRLGTNGADEIKVHPWFEGTEWDRLYQMEAAFVPEVKDELDTQNFEKFEESDSQSSTSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKCSKPKRPSIKSLFDGESEAADTSDTHTPTHSQQKTEGSFSNSTTSPKLDEVEMGKESM 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7341099 7349748 + ClCG09G008020.2 Cla09g00744 280164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00744 561 MobiDBLite consensus disorder prediction 9 31 - -
Cla09g00744 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Cla09g00744 561 Gene3D Phosphorylase Kinase; domain 1 112 207 - -
Cla09g00744 561 CDD STKc_NDR_like 120 484 - -
Cla09g00744 561 ProSiteProfiles AGC-kinase C-terminal domain profile. 421 493 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cla09g00744 561 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 531 - -
Cla09g00744 561 MobiDBLite consensus disorder prediction 289 303 - -
Cla09g00744 561 ProSiteProfiles Protein kinase domain profile. 122 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00744 561 MobiDBLite consensus disorder prediction 527 551 - -
Cla09g00744 561 Pfam Protein kinase domain 124 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00744 561 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Cla09g00744 561 Coils Coil 64 84 - -
Cla09g00744 561 MobiDBLite consensus disorder prediction 1 46 - -
Cla09g00744 561 Pfam Protein kinase C terminal domain 439 483 IPR017892 GO:0004674|GO:0005524|GO:0006468
Cla09g00744 561 SMART serkin_6 122 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00744 561 Gene3D Transferase(Phosphotransferase) domain 1 208 437 - -
Cla09g00744 561 SMART pkinase_C_6 421 485 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cla09g00744 561 SUPERFAMILY Protein kinase-like (PK-like) 95 473 IPR011009 -
Cla09g00744 561 MobiDBLite consensus disorder prediction 503 526 - -
Cla09g00744 561 MobiDBLite consensus disorder prediction 283 303 - -
Cla09g00744 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 531 - -
Cla09g00744 561 MobiDBLite consensus disorder prediction 503 561 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00671 Cla-Chr6:8500197 Cla09g00744 Cla-Chr9:7341099 0 dispersed
Cla08g01572 Cla-Chr8:28373553 Cla09g00744 Cla-Chr9:7341099 0 dispersed
Cla09g00744 Cla-Chr9:7341099 Cla02g02020 Cla-Chr2:35196819 1.61E-54 dispersed
Cla09g00744 Cla-Chr9:7341099 Cla03g01479 Cla-Chr3:30288766 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80798 PF00069 Pkinase 1.10E-63 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00744 K08790 - csv:101221720 1065.83