Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g00749 | ATGGCAGCCTCTTCTTCTTCTCCTTCTTCTCCTCCATGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCTCCTTATTTCCGCCACGAGCTCGGTGCCTCCCAATTCTCTGCCATCCACAAAGTTTTCGGTGCAAGCAATGCTTCCAAGCTTCTCGCTCACCTCCCAGTCTCCCACCGTTGCGAAGCGGCGGTGACGATCTCATACGAAGCTCAAGCGAGACTTCAAGATCCGATCTACGGTTGTGTATCTCATATTTTCGCTCTCCAGCAACAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCTCAAATCCTTCTCAACAACTACACTACAAGAAACCCTATTGAATTACCTTACGAAAAATCTTCATTTTATTCCGACGACCCATTACTAGATCTTCAAAGTTGGCTTCTGGCGGAGAGCTGCAGCGCCGCCGCGCCGGAGTTTGAATCTGCAGCGGTGCCGTACTTTGAGATGAGCGTCGTCGATTCAAATCTCGCCGGAGATTTCTGTTGCTAA | 555 | 48.29 | MAASSSSPSSPPCGACKFLRRKCVNGCIFAPYFRHELGASQFSAIHKVFGASNASKLLAHLPVSHRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNYTTRNPIELPYEKSSFYSDDPLLDLQSWLLAESCSAAAPEFESAAVPYFEMSVVDSNLAGDFCC | 184 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7412634 | 7413398 | - | ClCG09G008070.1 | Cla09g00749 | 280169 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g00749 | 184 | Coils | Coil | 92 | 112 | - | - | |
Cla09g00749 | 184 | ProSiteProfiles | LOB domain profile. | 11 | 113 | IPR004883 | - | |
Cla09g00749 | 184 | Pfam | Lateral organ boundaries (LOB) domain | 12 | 109 | IPR004883 | - | |
Cla09g00749 | 184 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 10 | 132 | - | - | |
Cla09g00749 | 184 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 17-RELATED | 10 | 132 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00087 | Cla-Chr7:988887 | Cla09g00749 | Cla-Chr9:7412634 | 2.64E-61 | dispersed | |
Cla09g00749 | Cla-Chr9:7412634 | Cla10g01510 | Cla-Chr10:30343813 | 6.79E-48 | dispersed | |
Cla09g00749 | Cla-Chr9:7412634 | Cla06g00031 | Cla-Chr6:357930 | 3.33E-46 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61706 | PF03195 | LOB | 1.20E-34 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g00749 | K13945 | - | csv:101220863 | 335.109 |