Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00790 ATGTCTCGAACACCGAATTATGAGTTCCAAGAATGGTGGAACAAGCAGAGAGAAAGGAACCATGATGAACACTTGCTGGAAAAGTCCGATAACTTATCGACCTCACCTGCATTTCTCTCTGTTGAGATCCGGAGTTCTGGGAGCCCTGGAGATCGGATGGCCGATAAGGACCGGGCGAGGACCAGGAGTGCCCGTCAGATTTCTTGGGTTTGGCTGTTGAAATTCCAGCAGATTGCTGGTTCATTGGCTTCAATCACCAATGGCGTCGTTTATCTAATTCGTACTGCTAATCGTCGGATCTCATCGCCGGATTCTCCAGCTGACTCGGCCTCGTCTCGGCTCTACAGGATTATCAAAGTGTTTTTGATTGTAGTGCTTCTATTGCTTGTTTTTGAGCTTGTGGCGTACTTCAATGGCTGGCATTTCAGTCCCCCTTCTGTGAGTTCCGCTTCTGCGGAAGTGCTTGGAATGATAGGGTTTCTCTATGCTAATTGGCTTCAGATTCGGGCAAATTACCTGGCTCCACCGCTGCAGTACTTGACCAATCTCTGCATTGTGTTGTTCCTGATCCAGTCAGTGGATCGTTTGCTTTTAATGTTTGGGTGTTTTTGGATCAAGTTTAGGCGATTGAAGCCTGTTGCGGCATTTGAGTACTCTTCCACGGATGAAAATGCTGCTAGTCCTGAGGATTATCCAATGGTATTGGTGCAGATTCCCATGTGCAATGAGAGGGAGCTATGTTGCTTTCCAGTGAAGAGTCATGCTGGAGAAAAAGGCAAGAATCAAATGGATCTGTTAGTTCTAACTTCTAAGGTATTGGCCTCTAGGATCAAGGTCTTTCTGAGTGTAGTGAGGAGTCTTTCTAGTAATTTGAATAGGTTCCTCATGTCATTTGAAGAGGTGTCAGGTCTCAAAAAGGATAAGCCAAGTGTTCTACCTGGGCTAAATTGTGGTGTTGAAGTTTATCAACAATCTATTGCAGCTGTTTGTATCCAGGACTGGCCAAAGGATAAAATGCTTGTACAGGTTTTAGATGATTCTGATGAGCTGGATGTTCAACAACTTATCAAGGCTGAAGTACAAAAATGGCAACAGAGAGGTGTCCGCATATTGTATAGACACCGCCTCATACGTACAGGCTACAAGGCAGGGAATCTCAAATCTGCAATGGGGTGCGATTATGTAAAAGATTACGAGTTTGTGGCAATCTTTGATGCAGATTTTCAGCCAGGACCAGACTTTTTAAAGAAAACTATTCCACATTTTAAGGGGAATGATGAACTTGCATTGGTCCAAACAAGGTGGTCATTTGTGAACAAGGACGAAAACTTGCTCACAAGATTGCAGAACATAAATTTATCCTTCCATTTTGAAGTTGAGCAGCAAGTAAATGGCATGTTTATCAACTTTTTTGGTTTCAATGGTACTGCTGGAGTCTGGAGAATTAAAGCTTTGGAAGAATGTGGGGGCTGGTTAGAGAGAACAACTGTTGAGGACATGGATGTTGCAGTTCGTGCCCATCTTTGTGGCTGGAAGTTCATATATCTAAATGATGTGAAGTGCCTTTGCGAACTTCCAGAATCATATGAAGCATACAAGAAACAACAGCACCGCTGGCATTCGGGCCCTATGCAGTTATTTCGTTTGTGCTTCTCTGACATACTCAAATCAAAGGTGAGTTGGAAGAAGAAAGCTAATTTGATTTTTCTCTTCTTCCTCTTGCGAAAGCTCGTCCTTCCCTTTTATTCTTTTACCTTGTTCTGCATAATTCTCCCCCTTACCATGTTCCTTCCAGAAGCTCATCTACCGGCTTGGGTCGTTTGCTACGTTCCTGGAATCATGTCCATCTTAAATATTCTTCCCGCACCGCGATCATTTCCATTTTTAGTCCCCTATCTTCTATTTGAAAACACCATGTCTGTTACCAAATTCAATGCCATGATATCAGGGTTATTCCGCTTTGGAAGTTCATACGAATGGATAGTAACAAAAAAACTAGGAAGATCATCTGAAAACAATCTTGTTGCTTTTGAAAAAGAACTAGAACCTCTAGTTGAGGGTACAAGTCTTCATCGATCTTCCTCAGAATCAGGTCTTCAAGAACTGACCAAGCTCGAGATATCGAAAAAAACAGGGAAACACAAAAGAAATCGTTTGTATAGGAAGGAATTGGCTCTTGCATTCATTTTGTTAACTGCCTCGGCGAGAAGTCTGTTATCTGCTCAAGGAATTCACTTCTACTTCCTATTATTTCAAGGTATCACTTTTCTAGTCGTCGGTCTTGATTTAATCGGAGAGCAGGTCAGTTAA 2310 42.64 MSRTPNYEFQEWWNKQRERNHDEHLLEKSDNLSTSPAFLSVEIRSSGSPGDRMADKDRARTRSARQISWVWLLKFQQIAGSLASITNGVVYLIRTANRRISSPDSPADSASSRLYRIIKVFLIVVLLLLVFELVAYFNGWHFSPPSVSSASAEVLGMIGFLYANWLQIRANYLAPPLQYLTNLCIVLFLIQSVDRLLLMFGCFWIKFRRLKPVAAFEYSSTDENAASPEDYPMVLVQIPMCNERELCCFPVKSHAGEKGKNQMDLLVLTSKVLASRIKVFLSVVRSLSSNLNRFLMSFEEVSGLKKDKPSVLPGLNCGVEVYQQSIAAVCIQDWPKDKMLVQVLDDSDELDVQQLIKAEVQKWQQRGVRILYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPGPDFLKKTIPHFKGNDELALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNGMFINFFGFNGTAGVWRIKALEECGGWLERTTVEDMDVAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFSDILKSKVSWKKKANLIFLFFLLRKLVLPFYSFTLFCIILPLTMFLPEAHLPAWVVCYVPGIMSILNILPAPRSFPFLVPYLLFENTMSVTKFNAMISGLFRFGSSYEWIVTKKLGRSSENNLVAFEKELEPLVEGTSLHRSSSESGLQELTKLEISKKTGKHKRNRLYRKELALAFILLTASARSLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVS 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7991080 7998430 - ClCG09G008500.1 Cla09g00790 280210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00790 769 Pfam Glycosyl transferase family group 2 401 606 IPR001173 -
Cla09g00790 769 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 25 768 - -
Cla09g00790 769 SUPERFAMILY Nucleotide-diphospho-sugar transferases 323 585 IPR029044 -
Cla09g00790 769 PANTHER - 25 768 - -
Cla09g00790 769 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 309 524 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g00820 Cla-Chr8:20603725 Cla09g00790 Cla-Chr9:7991080 3.30E-115 dispersed
Cla09g00790 Cla-Chr9:7991080 Cla09g01834 Cla-Chr9:36014918 5.70E-37 dispersed
Cla09g00790 Cla-Chr9:7991080 Cla02g02126 Cla-Chr2:36313503 8.18E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00790 - - csv:101216681 899.427