Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00796 ATGAACGATGTGAGAGGTCAAGAACAAATTCCTGAATTAGATTTTGGAAAATTGGAAGTGGTGACGGCGCTCGGCCGGGGAGCGAAGGGAGTCGTGTTCTTGGCTCGAAATGCGGCAGGGGATGACGACGGCGAATGGTTGGCCTTGAAGGTGATTTCCAGAGAATTAATCGAGAGGAAGGCCAAGATTGTGAATAGCGATGGAGCTGAGTATCGCAGAGTTTGCTTTGAACGAGAAGTTTTGCGGCTTTTTCGGCATCCGCTTTTGCCTCGATTGCGAGGAGTTTTGAATACTCAGAAAGTTGTAGGTTACGCCATTGATTATTGTAATGGACGAGATCTTAATACTCTCAGGAAAAAACAGACCGAAAAAATGTTCTCCGACGACGTTATTAGATTTTACGCTGCGGAATTAGTTATGGCGTTGGAGTATGTACACAGTCTAGGAATAGTTTACAGAGATTTGAAGCCGGAGAATGTTATGGTTCAACACAGCGGCCATATAATGCTTGTGGATTTTGATCTCTCTACCAGACTCTCTCAAAAATCTCCGAAATCGTCTCCGTCTCCGTCGCCGTCGCCATCGCCATCGCCGGCGGTAGAGGTTTTGGCGGAGTCTAAATTCGCGATGAATGAAAAGATTAACAAGAAAAAGAACAAGAAGCGATTCTTTCATTTTCACCGGTTCTGCAACTCCGGCGTATCACCGGAGGAATCCGAACATCAGGCTACGGCCGCGGAGAAACCAAGATCGCAGCCGGAGTCGCCGGATTCGGAGTCGTCGGAGAAGTCGAACTCGTTCGTGGGAACAGAGGACTACGTGGCACCGGAAATCGTTGCCGGGAAGGGTCATGACTTCGCCGTGGACTGGTGGTCACTCGGCGTAGTTCTGTACGAGATGCTGTACGGAACGACGCCATTTAGGGGCTCGAATCGGAAGGAAACATTCTACCGGATTCTAACGAAAACGCCGGATCTGTGCGGCGAAGCGACGGCGTTAAGGGATTTGATCAGGAAGTTGCTGGAGAAAGATCCGAAGAAGAGAATCGAACTGGAGGAAATCAAGGGCCACGATTTCTTTAAAGGGACTGACTGGGATTTAGTTCTGGAAATGCCCCGGCCGCCGTCGCTACCTGAAATGGCGGAAGAGGACATAAATGGAAATAACTTAATTGATGTGGAGTCTTTTGTACAAGACGTATTTTGCAGAGAAATGGAGAAGAAGAATCAAATTAACGGTGATGAAGGAAAAGGGTTAATTCCTAATTACACGGACTCTGACACATTTCATGTATTCTAA 1299 47.58 MNDVRGQEQIPELDFGKLEVVTALGRGAKGVVFLARNAAGDDDGEWLALKVISRELIERKAKIVNSDGAEYRRVCFEREVLRLFRHPLLPRLRGVLNTQKVVGYAIDYCNGRDLNTLRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQHSGHIMLVDFDLSTRLSQKSPKSSPSPSPSPSPSPAVEVLAESKFAMNEKINKKKNKKRFFHFHRFCNSGVSPEESEHQATAAEKPRSQPESPDSESSEKSNSFVGTEDYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTKTPDLCGEATALRDLIRKLLEKDPKKRIELEEIKGHDFFKGTDWDLVLEMPRPPSLPEMAEEDINGNNLIDVESFVQDVFCREMEKKNQINGDEGKGLIPNYTDSDTFHVF 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8126349 8127879 + ClCG09G008560.1 Cla09g00796 280216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00796 432 MobiDBLite consensus disorder prediction 241 257 - -
Cla09g00796 432 Gene3D Phosphorylase Kinase; domain 1 18 112 - -
Cla09g00796 432 ProSiteProfiles Protein kinase domain profile. 18 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00796 432 Gene3D Transferase(Phosphotransferase) domain 1 260 379 - -
Cla09g00796 432 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 7 406 - -
Cla09g00796 432 Gene3D Transferase(Phosphotransferase) domain 1 113 183 - -
Cla09g00796 432 Pfam Protein kinase domain 19 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00796 432 Pfam Protein kinase domain 259 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00796 432 SUPERFAMILY Protein kinase-like (PK-like) 16 386 IPR011009 -
Cla09g00796 432 MobiDBLite consensus disorder prediction 234 267 - -
Cla09g00796 432 MobiDBLite consensus disorder prediction 179 200 - -
Cla09g00796 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Cla09g00796 432 SMART serkin_6 18 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g00796 432 PANTHER FLIPPASE KINASE 1-RELATED 7 406 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02265 Cla-Chr2:37770052 Cla09g00796 Cla-Chr9:8126349 4.97E-93 dispersed
Cla09g00796 Cla-Chr9:8126349 Cla04g00971 Cla-Chr4:24841948 1.53E-71 dispersed
Cla09g00796 Cla-Chr9:8126349 Cla02g02140 Cla-Chr2:36457569 4.47E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80799 PF00069 Pkinase 4.80E-30 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00796 K20714 - csv:101223223 664.455