Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00858 ATGAATGATCTTGTGGAATTTCATTCTGAAGATTTGCATGCAGGGTTTGTAAATGAACAACAAGAAGAAATTATGGATCAAACACAGATCTGGCTTCATGATCAAAATCAACAACAACAAAATCATCAAAATTTTCTGTCTGATAATGATGATGATACTTTGATGTTCTACTCCGATTTCCCTCCACTGCCTGATTTTCCATGCATGTCGTCGTCTTCGTCGTCGTCGTCTACTCCTGCTCCGGTTAAAGCCACGGCTTCGTCCTCGTCGTCCTCCTCATCGTCCTCCGTCACTTCATGGGCAGTTTTGAAATCAGATGCTGATGAAATTACTGAAGAAATCAGAACAAATTATGATGCCAACAAATTATCATCGCCTCCGGTAGCGGAGACCGCGTTCACCGGTGGCGGGGATTGTACCGACGATATGATGATGGAGACGTTTGGATACATGGATTTACTCGAAGATAGTAACGAGTTTTTCGATCCGACGTGTATATTTCAAAACGAACAAGAACAACAACAAGAACAACGAGTAGTAGTAGAAGAAGATCAAGAGGGTTTGGAAGATTTGCAATTGGAGAGATTTGAAGAAGTGGAAATGGAGGATTTGATGATGATGCATGGCGGTGAAAGTAAGGATAATGATGATGATAATGGAGGGAAACAAAACGACGTGGTTGAGGAAGAAGATATGGCAAAGGTTTTTTTGGAATGGCTTAGGAGTAATAGAGAAACAGTTTCTGCTGATGATTTGAGGAATGTTAGAATAAAAAAAGCCACCATCGAAAGCGCCGCCCGCCGACTCGGCGGCGGCAAGGAGGGAATGAAACAGCTTTTGAAGCTTGTTCTTCAATGGGTTCAAACAAATCACCTTCACAAGAGGAAATTCAAAGATCTCACTGTTGAAACTGATACCCATTTCTTAGGGTTTCAAAATAACCCTAATTCCTCCTCCAACCTCCCTTGGATCCAAACCCCGCCCCCGTTACCGCCTCCGCCTTTGTATTCTTCTCCGATGCTCGGATATGTCCCGGCCACTGGCGGAGATGCGTATGGTGTTGGCCGTGGTTTCTCGGATCATTACGGCCAGTTACTTTACTCCTCCTTGTCCTGGAGTAATAATAGTAGTAGTAACAATAATAATAATTTCTCGGGACAGTTTGGACTACCCCCGTCGCATTTCAACTCCTTTGTTGATAATTTTGCGGCGGGGCCTCCCCTGCCACCGCCGCAACCACAAGGTTTTGCAACGGGGTATGGCGGAGGGCATCAATTCCCATATGTGGGTCAGTATTTTCAAGGGCAGGGTGGTAGTGGTGGCGCCGGTGGCGATAATGGTTTGGTTAGGTTGGATTCCTCAGCAACAAAGGAGGCTCGGAAGAAGAGAATGGCGAGGCAGCGGCGATTCTCTGCACATCATCGCCACCATCATGGTGGCCACCATGGCAACAGCCACCAAGATCAGCATCCCACTCAGATGAATCCTAATGCTTCAGATCATTGCAACATGGCTACAACTACTCAGCCCAATGCTGGTAACTGGGTCTACTGGCCGTCCCCCAGCGCAGCAGTGGCCTCTTCCGCCACATCTTCCGGATTTCCGGTGGACTCGCAGCCTGTACAAGCTGTTGATCGGCCTAATTCTTCCATGCAGAATCAGAACTACCCACCACGAATTCCATCTGACCGGCGGCTGGGATGGAAACCAGAGAAAAATTTGAAGTTTCTTTTACAGAAGGTTTTGAAACAAAGTGATGTGGGCAATTTGGGGAGAATTGTACTGCCAAAGAAAGAAGCAGAAACCCATCTCCCAGAATTGGAGGCAAGAGATGGGATTTCCATTGCAATGGAAGACATTGGAACTTCAAGAGTTTGGAATATGCGTTATAGGTATTGGCCAAACAACAAAAGCAGAATGTATCTCCTTGAAAATACAGGGGACTTTGTAAGAGCCAATGGACTTCAAGAAGGAGACTTCATTGTCATATACTCAGACGTCAAGTGTGGGAAATATGTAAATGATTCGAGGAGTGAAAGTACGGCAACCCGGGTCGAAACCCGAGAGCAGAAGGCCAGGAAAATCGCAAAGAAGCCATACGACTACGGCTGCCAATGCGTCGTCACCTTCGCTAACGACCATCGCAACACCGAAGAGACACTAAAGAAACTTGTTCTGATTCTGTTAAAGATTTTTAAGACTGAGGGCCATTGGCCACTGCATGAAGAACAGAGATAA 2238 46.02 MNDLVEFHSEDLHAGFVNEQQEEIMDQTQIWLHDQNQQQQNHQNFLSDNDDDTLMFYSDFPPLPDFPCMSSSSSSSSTPAPVKATASSSSSSSSSSVTSWAVLKSDADEITEEIRTNYDANKLSSPPVAETAFTGGGDCTDDMMMETFGYMDLLEDSNEFFDPTCIFQNEQEQQQEQRVVVEEDQEGLEDLQLERFEEVEMEDLMMMHGGESKDNDDDNGGKQNDVVEEEDMAKVFLEWLRSNRETVSADDLRNVRIKKATIESAARRLGGGKEGMKQLLKLVLQWVQTNHLHKRKFKDLTVETDTHFLGFQNNPNSSSNLPWIQTPPPLPPPPLYSSPMLGYVPATGGDAYGVGRGFSDHYGQLLYSSLSWSNNSSSNNNNNFSGQFGLPPSHFNSFVDNFAAGPPLPPPQPQGFATGYGGGHQFPYVGQYFQGQGGSGGAGGDNGLVRLDSSATKEARKKRMARQRRFSAHHRHHHGGHHGNSHQDQHPTQMNPNASDHCNMATTTQPNAGNWVYWPSPSAAVASSATSSGFPVDSQPVQAVDRPNSSMQNQNYPPRIPSDRRLGWKPEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYVNDSRSESTATRVETREQKARKIAKKPYDYGCQCVVTFANDHRNTEETLKKLVLILLKIFKTEGHWPLHEEQR 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8807601 8810799 - ClCG09G009230.2 Cla09g00858 280278

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00858 745 MobiDBLite consensus disorder prediction 454 502 - -
Cla09g00858 745 MobiDBLite consensus disorder prediction 529 559 - -
Cla09g00858 745 SMART B3_2 578 679 IPR003340 GO:0003677
Cla09g00858 745 MobiDBLite consensus disorder prediction 486 502 - -
Cla09g00858 745 CDD BfiI_C_EcoRII_N_B3 576 672 - -
Cla09g00858 745 Pfam B3 DNA binding domain 579 672 IPR003340 GO:0003677
Cla09g00858 745 Gene3D - 569 687 IPR015300 -
Cla09g00858 745 SUPERFAMILY DNA-binding pseudobarrel domain 577 672 IPR015300 -
Cla09g00858 745 MobiDBLite consensus disorder prediction 529 565 - -
Cla09g00858 745 MobiDBLite consensus disorder prediction 461 483 - -
Cla09g00858 745 ProSiteProfiles B3 DNA-binding domain profile. 578 691 IPR003340 GO:0003677
Cla09g00858 745 MobiDBLite consensus disorder prediction 68 98 - -
Cla09g00858 745 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 26 687 IPR044800 GO:0003700
Cla09g00858 745 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 26 687 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00858 - - - csv:101204282 975.696
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00812 Cla-Chr1:9566809 Cla09g00858 Cla-Chr9:8807601 8.25E-38 dispersed
Cla01g02255 Cla-Chr1:36484598 Cla09g00858 Cla-Chr9:8807601 3.32E-32 dispersed
Cla09g00858 Cla-Chr9:8807601 Cla10g02148 Cla-Chr10:37094920 1.26E-14 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi7g701 . . . . Bpe03g00937 . Bma13g00743 . Cmo08g00060 Cmo17g01215 . . . . . Cpe17g00978 . Bhi09g01373 . . . . . . Cla09g00858 Cam09g0906 Cec09g0909 Cco09g0909 . . Cre09g0880 . . . . Lsi02g02064 Csa07g01483 . . Blo07g01062 . Bda12g00689 . . . . . . . . Cma08g00060 . Car08g00053 . . Cpe12g01066 . . . . . . . . . . . . . . . . Chy01g01349 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla09g00858 . 29 673 B3 DNA Binding Superfamily AT3G24650 50.1 9.5e-108 388.3
Cla01g00812 . 67 279 B3 DNA Binding Superfamily AT3G26790 55.9 1.6e-64 243.4
Cla01g02255 . 174 328 B3 DNA Binding Superfamily AT1G28300 59.4 6.2e-39 158.7
Cla05g02328 . 1 348 B3 DNA Binding Superfamily AT1G25560 58.6 8.1e-108 387.5
Cla03g00943 . 34 311 B3 DNA Binding Superfamily AT1G25560 63.9 2.8e-92 335.9
Cla10g01776 . 41 155 B3 DNA Binding Superfamily AT1G25560 66.1 2.8e-39 159.8
Cla06g00220 . 78 207 B3 DNA Binding Superfamily AT1G25560 57.6 2.0e-37 153.7
Cla01g00124 . 52 160 B3 DNA Binding Superfamily AT1G25560 66.1 4.4e-37 152.5
Cla01g00124 . 51 165 B3 DNA Binding Superfamily AT1G01030 82.8 3.1e-53 206.1
Cla05g02328 . 183 306 B3 DNA Binding Superfamily AT1G01030 62.2 8.2e-38 154.8
Cla04g00891 . 26 756 B3 DNA Binding Superfamily AT4G30080 55.7 4.2e-211 731.5
Cla08g00767 . 372 1049 B3 DNA Binding Superfamily AT4G30080 55.0 1.6e-197 686.4
Cla03g00007 . 4 736 B3 DNA Binding Superfamily AT2G30470 51.9 7.5e-199 691.0
Cla09g01730 . 16 380 B3 DNA Binding Superfamily AT3G18990 57.8 9.6e-104 374.0
Cla11g00028 . 166 787 B3 DNA Binding Superfamily AT1G59750 60.6 4.6e-202 701.4
Cla09g00886 . 14 676 B3 DNA Binding Superfamily AT1G59750 50.9 6.1e-170 594.7
Cla11g01119 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.9 1.5e-107 387.5
Cla01g02432 CCT 72 432 B3 DNA Binding Superfamily AT1G59750 55.6 1.5e-107 387.5
Cla03g00607 CCT 23 413 B3 DNA Binding Superfamily AT1G59750 51.1 6.4e-103 372.1
Cla05g01890 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 1.6e-98 357.5
Cla01g00816 . 24 338 B3 DNA Binding Superfamily AT1G59750 55.4 9.0e-97 351.7
Cla11g00124 . 129 441 B3 DNA Binding Superfamily AT1G59750 54.3 2.5e-94 343.6
Cla04g00891 . 25 756 B3 DNA Binding Superfamily AT2G28350 51.8 1.5e-192 669.8
Cla08g00767 . 378 1055 B3 DNA Binding Superfamily AT2G28350 51.0 1.4e-174 610.1
Cla09g00886 . 14 691 B3 DNA Binding Superfamily AT2G46530 56.2 3.2e-189 658.7
Cla01g00174 . 82 750 B3 DNA Binding Superfamily AT2G46530 52.7 1.5e-173 606.7
Cla07g01086 . 18 729 B3 DNA Binding Superfamily AT2G46530 50.6 8.0e-172 600.9
Cla01g02432 CCT 50 417 B3 DNA Binding Superfamily AT2G46530 51.9 1.5e-98 357.5
Cla11g01119 . 21 376 B3 DNA Binding Superfamily AT2G46530 50.4 3.5e-90 329.7
Cla01g00816 . 15 338 B3 DNA Binding Superfamily AT2G46530 52.9 3.8e-89 326.2
Cla11g00124 . 121 441 B3 DNA Binding Superfamily AT2G46530 50.5 7.0e-83 305.4
Cla04g00891 . 26 756 B3 DNA Binding Superfamily AT4G30080 55.7 4.2e-211 731.5
Cla08g00767 . 372 1049 B3 DNA Binding Superfamily AT4G30080 55.0 1.6e-197 686.4
Cla09g00886 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.3 1.8e-175 612.8
Cla01g02432 CCT 100 413 B3 DNA Binding Superfamily AT3G61830 53.5 1.6e-86 317.4
Cla01g00816 . 52 338 B3 DNA Binding Superfamily AT3G61830 51.9 1.0e-77 288.1
Cla11g00124 . 157 441 B3 DNA Binding Superfamily AT3G61830 50.5 7.1e-71 265.4
Cla11g00124 . 121 1330 B3 DNA Binding Superfamily AT1G19220 56.6 0.0e+00 1111.3
Cla11g01119 . 1 1108 B3 DNA Binding Superfamily AT1G19220 50.6 3.6e-244 842.0
Cla06g01783 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 2.5e-104 377.5
Cla09g00886 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 1.3e-60 229.9
Cla06g01783 . 41 246 B3 DNA Binding Superfamily AT1G43950 51.9 1.7e-55 213.0
Cla01g00174 . 81 306 B3 DNA Binding Superfamily AT1G43950 50.7 1.9e-54 209.5
Cla01g02284 CCT 166 451 B3 DNA Binding Superfamily AT2G33860 66.9 1.8e-109 393.3
Cla02g02048 . 168 451 B3 DNA Binding Superfamily AT2G33860 57.0 2.5e-90 329.7
Cla06g01783 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 5.4e-77 285.4
Cla01g02432 CCT 176 407 B3 DNA Binding Superfamily AT2G33860 56.5 2.2e-70 263.5
Cla11g01119 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 1.2e-68 257.7
Cla03g00607 CCT 127 375 B3 DNA Binding Superfamily AT2G33860 53.0 6.0e-68 255.4
Cla05g01890 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 6.0e-68 255.4
Cla09g00886 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.4 2.5e-66 250.0
Cla01g00816 . 128 338 B3 DNA Binding Superfamily AT2G33860 56.9 1.3e-65 247.7
Cla11g00124 . 232 441 B3 DNA Binding Superfamily AT2G33860 55.2 2.9e-62 236.5
Cla02g02048 . 47 802 B3 DNA Binding Superfamily AT5G60450 60.4 2.4e-250 862.1
Cla01g02284 CCT 41 460 B3 DNA Binding Superfamily AT5G60450 54.3 1.0e-120 431.4
Cla11g00124 . 114 454 B3 DNA Binding Superfamily AT5G60450 50.1 1.0e-91 335.1
Cla05g01890 . 8 937 B3 DNA Binding Superfamily AT1G19850 60.5 8.5e-292 1000.0
Cla11g00124 . 119 441 B3 DNA Binding Superfamily AT1G19850 74.0 1.7e-138 490.7
Cla09g00886 . 10 351 B3 DNA Binding Superfamily AT1G19850 50.3 1.3e-95 348.2
Cla01g02432 CCT 50 942 B3 DNA Binding Superfamily AT1G30330 70.9 0.0e+00 1181.0
Cla03g00607 CCT 1 915 B3 DNA Binding Superfamily AT1G30330 68.9 0.0e+00 1152.5
Cla01g00816 . 1 920 B3 DNA Binding Superfamily AT1G30330 55.2 8.2e-253 870.5
Cla09g00886 . 7 352 B3 DNA Binding Superfamily AT1G30330 53.8 1.5e-100 364.8
Cla11g00124 . 121 1314 B3 DNA Binding Superfamily AT5G20730 52.9 1.5e-301 1032.7
Cla01g02432 CCT 53 517 B3 DNA Binding Superfamily AT5G20730 59.1 7.2e-150 528.9
Cla03g00607 CCT 4 488 B3 DNA Binding Superfamily AT5G20730 57.3 2.3e-148 523.9
Cla01g00816 . 1 524 B3 DNA Binding Superfamily AT5G20730 51.4 8.2e-138 488.8
Cla06g01783 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.0 4.3e-102 370.2
Cla01g00816 . 98 889 B3 DNA Binding Superfamily AT5G37020 59.6 1.3e-242 836.3
Cla01g02432 CCT 146 904 B3 DNA Binding Superfamily AT5G37020 54.0 1.0e-199 693.7
Cla03g00607 CCT 97 878 B3 DNA Binding Superfamily AT5G37020 51.7 1.1e-185 647.1
Cla11g01119 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.1 6.5e-109 392.1
Cla11g00124 . 202 600 B3 DNA Binding Superfamily AT5G37020 51.0 2.9e-101 366.7
Cla09g00886 . 17 676 B3 DNA Binding Superfamily AT4G23980 58.1 5.7e-197 684.5
Cla07g01086 . 1 732 B3 DNA Binding Superfamily AT4G23980 53.2 7.4e-197 684.1
Cla01g00174 . 85 751 B3 DNA Binding Superfamily AT4G23980 56.7 7.6e-194 674.1
Cla11g01119 . 17 385 B3 DNA Binding Superfamily AT4G23980 50.3 2.1e-98 357.1
Cla05g01890 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.4 5.1e-97 352.4
Cla01g00816 . 13 338 B3 DNA Binding Superfamily AT4G23980 51.1 1.6e-87 320.9
Cla06g01783 . 36 846 B3 DNA Binding Superfamily AT5G62000 63.2 7.7e-290 993.4
Cla11g01119 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 2.1e-109 394.0
Cla11g00124 . 129 441 B3 DNA Binding Superfamily AT5G62000 56.0 3.4e-96 350.1
Cla09g00858 . 29 673 B3 DNA Binding Superfamily AT3G24650 50.1 9.5e-108 388.3
Cla01g02255 . 174 328 B3 DNA Binding Superfamily AT1G28300 59.4 6.2e-39 158.7
Cla01g00812 . 67 279 B3 DNA Binding Superfamily AT3G26790 55.9 1.6e-64 243.4
Cla03g00007 . 4 736 B3 DNA Binding Superfamily AT2G30470 51.9 7.5e-199 691.0
Cla11g00124 . 121 1330 B3 DNA Binding Superfamily AT1G19220 56.6 0.0e+00 1111.3
Cla11g01119 . 1 1108 B3 DNA Binding Superfamily AT1G19220 50.6 3.6e-244 842.0
Cla06g01783 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 2.5e-104 377.5
Cla05g01890 . 8 937 B3 DNA Binding Superfamily AT1G19850 60.5 8.5e-292 1000.0
Cla11g00124 . 119 441 B3 DNA Binding Superfamily AT1G19850 74.0 1.7e-138 490.7
Cla09g00886 . 10 351 B3 DNA Binding Superfamily AT1G19850 50.3 1.3e-95 348.2
Cla01g02432 CCT 50 942 B3 DNA Binding Superfamily AT1G30330 70.9 0.0e+00 1181.0
Cla03g00607 CCT 1 915 B3 DNA Binding Superfamily AT1G30330 68.9 0.0e+00 1152.5
Cla01g00816 . 1 920 B3 DNA Binding Superfamily AT1G30330 55.2 8.2e-253 870.5
Cla09g00886 . 7 352 B3 DNA Binding Superfamily AT1G30330 53.8 1.5e-100 364.8
Cla11g00124 . 121 1314 B3 DNA Binding Superfamily AT5G20730 52.9 1.5e-301 1032.7
Cla01g02432 CCT 53 517 B3 DNA Binding Superfamily AT5G20730 59.1 7.2e-150 528.9
Cla03g00607 CCT 4 488 B3 DNA Binding Superfamily AT5G20730 57.3 2.3e-148 523.9
Cla01g00816 . 1 524 B3 DNA Binding Superfamily AT5G20730 51.4 8.2e-138 488.8
Cla06g01783 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.0 4.3e-102 370.2
Cla01g00816 . 98 889 B3 DNA Binding Superfamily AT5G37020 59.6 1.3e-242 836.3
Cla01g02432 CCT 146 904 B3 DNA Binding Superfamily AT5G37020 54.0 1.0e-199 693.7
Cla03g00607 CCT 97 878 B3 DNA Binding Superfamily AT5G37020 51.7 1.1e-185 647.1
Cla11g01119 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.1 6.5e-109 392.1
Cla11g00124 . 202 600 B3 DNA Binding Superfamily AT5G37020 51.0 2.9e-101 366.7
Cla01g02284 CCT 166 451 B3 DNA Binding Superfamily AT2G33860 66.9 1.8e-109 393.3
Cla02g02048 . 168 451 B3 DNA Binding Superfamily AT2G33860 57.0 2.5e-90 329.7
Cla06g01783 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 5.4e-77 285.4
Cla01g02432 CCT 176 407 B3 DNA Binding Superfamily AT2G33860 56.5 2.2e-70 263.5
Cla11g01119 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 1.2e-68 257.7
Cla03g00607 CCT 127 375 B3 DNA Binding Superfamily AT2G33860 53.0 6.0e-68 255.4
Cla05g01890 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 6.0e-68 255.4
Cla09g00886 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.4 2.5e-66 250.0
Cla01g00816 . 128 338 B3 DNA Binding Superfamily AT2G33860 56.9 1.3e-65 247.7
Cla11g00124 . 232 441 B3 DNA Binding Superfamily AT2G33860 55.2 2.9e-62 236.5
Cla02g02048 . 47 802 B3 DNA Binding Superfamily AT5G60450 60.4 2.4e-250 862.1
Cla01g02284 CCT 41 460 B3 DNA Binding Superfamily AT5G60450 54.3 1.0e-120 431.4
Cla11g00124 . 114 454 B3 DNA Binding Superfamily AT5G60450 50.1 1.0e-91 335.1
Cla11g00028 . 166 787 B3 DNA Binding Superfamily AT1G59750 60.6 4.6e-202 701.4
Cla09g00886 . 14 676 B3 DNA Binding Superfamily AT1G59750 50.9 6.1e-170 594.7
Cla11g01119 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.9 1.5e-107 387.5
Cla01g02432 CCT 72 432 B3 DNA Binding Superfamily AT1G59750 55.6 1.5e-107 387.5
Cla03g00607 CCT 23 413 B3 DNA Binding Superfamily AT1G59750 51.1 6.4e-103 372.1
Cla05g01890 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 1.6e-98 357.5
Cla01g00816 . 24 338 B3 DNA Binding Superfamily AT1G59750 55.4 9.0e-97 351.7
Cla11g00124 . 129 441 B3 DNA Binding Superfamily AT1G59750 54.3 2.5e-94 343.6
Cla06g01783 . 36 846 B3 DNA Binding Superfamily AT5G62000 63.2 7.7e-290 993.4
Cla11g01119 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 2.1e-109 394.0
Cla11g00124 . 129 441 B3 DNA Binding Superfamily AT5G62000 56.0 3.4e-96 350.1
Cla09g00886 . 14 691 B3 DNA Binding Superfamily AT2G46530 56.2 3.2e-189 658.7
Cla01g00174 . 82 750 B3 DNA Binding Superfamily AT2G46530 52.7 1.5e-173 606.7
Cla07g01086 . 18 729 B3 DNA Binding Superfamily AT2G46530 50.6 8.0e-172 600.9
Cla01g02432 CCT 50 417 B3 DNA Binding Superfamily AT2G46530 51.9 1.5e-98 357.5
Cla11g01119 . 21 376 B3 DNA Binding Superfamily AT2G46530 50.4 3.5e-90 329.7
Cla01g00816 . 15 338 B3 DNA Binding Superfamily AT2G46530 52.9 3.8e-89 326.2
Cla11g00124 . 121 441 B3 DNA Binding Superfamily AT2G46530 50.5 7.0e-83 305.4
Cla09g00886 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.3 1.8e-175 612.8
Cla01g02432 CCT 100 413 B3 DNA Binding Superfamily AT3G61830 53.5 1.6e-86 317.4
Cla01g00816 . 52 338 B3 DNA Binding Superfamily AT3G61830 51.9 1.0e-77 288.1
Cla11g00124 . 157 441 B3 DNA Binding Superfamily AT3G61830 50.5 7.1e-71 265.4
Cla09g00886 . 17 676 B3 DNA Binding Superfamily AT4G23980 58.1 5.7e-197 684.5
Cla07g01086 . 1 732 B3 DNA Binding Superfamily AT4G23980 53.2 7.4e-197 684.1
Cla01g00174 . 85 751 B3 DNA Binding Superfamily AT4G23980 56.7 7.6e-194 674.1
Cla11g01119 . 17 385 B3 DNA Binding Superfamily AT4G23980 50.3 2.1e-98 357.1
Cla05g01890 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.4 5.1e-97 352.4
Cla01g00816 . 13 338 B3 DNA Binding Superfamily AT4G23980 51.1 1.6e-87 320.9
Cla09g00886 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 1.3e-60 229.9
Cla06g01783 . 41 246 B3 DNA Binding Superfamily AT1G43950 51.9 1.7e-55 213.0
Cla01g00174 . 81 306 B3 DNA Binding Superfamily AT1G43950 50.7 1.9e-54 209.5
Cla04g00891 . 25 756 B3 DNA Binding Superfamily AT2G28350 51.8 1.5e-192 669.8
Cla08g00767 . 378 1055 B3 DNA Binding Superfamily AT2G28350 51.0 1.4e-174 610.1
Cla04g00891 . 26 756 B3 DNA Binding Superfamily AT4G30080 55.7 4.2e-211 731.5
Cla08g00767 . 372 1049 B3 DNA Binding Superfamily AT4G30080 55.0 1.6e-197 686.4
Cla01g00124 . 51 165 B3 DNA Binding Superfamily AT1G01030 82.8 3.1e-53 206.1
Cla05g02328 . 183 306 B3 DNA Binding Superfamily AT1G01030 62.2 8.2e-38 154.8
Cla05g02328 . 1 348 B3 DNA Binding Superfamily AT1G25560 58.6 8.1e-108 387.5
Cla03g00943 . 34 311 B3 DNA Binding Superfamily AT1G25560 63.9 2.8e-92 335.9
Cla10g01776 . 41 155 B3 DNA Binding Superfamily AT1G25560 66.1 2.8e-39 159.8
Cla06g00220 . 78 207 B3 DNA Binding Superfamily AT1G25560 57.6 2.0e-37 153.7
Cla01g00124 . 52 160 B3 DNA Binding Superfamily AT1G25560 66.1 4.4e-37 152.5
Cla02g00594 . 55 286 B3 DNA Binding Superfamily AT3G19184 62.2 1.3e-68 256.9
Cla08g01552 . 247 468 B3 DNA Binding Superfamily AT3G19184 55.5 3.4e-53 205.7
Cla08g01552 . 292 469 B3 DNA Binding Superfamily AT5G42700 58.3 8.6e-53 203.8
Cla02g00594 . 105 271 B3 DNA Binding Superfamily AT5G42700 55.6 1.9e-44 176.0
Cla09g01730 . 16 380 B3 DNA Binding Superfamily AT3G18990 57.8 9.6e-104 374.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006674 1 1 2 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 2 1 1 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61714 PF02362 B3 5.00E-17 CL0405 Cla TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla09g00858 Cla_Chr09 FPKM 14.323837 13.841105 28.541874 31.052271 42.520607 47.032246 42.647961 23.615305 22.848324 22.955559