Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00903 ATGTCAACACTGAGCCAGAGCAGCTCCCTCAACAGTTGCACTAAGTTTCCCCACCCTCCCCATGACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCCAAACGCGCCCAATGGCTACGCGCCGCGGTCCTTGGTGCCAACGATGGCCTCGTCTCTACGGCATCTCTCATGATGGGCGTCGGTGCCGTCAAGCACGACGTCAAGGCCATGATCCTCACCGGCTTTGCTGGCCTCATTGCCGGTGCCTGCAGCATGGCCATCGGTGAGTTCGTTTCTGTCTACTCTCAATTGGATATAGAAATGGCGCATATAGAAAGAAACAAGGATCATAGGAAGGAGTTGGAGGAAGAGGAGAGAGAGAAACTACCAAACCCTCTTCAGGCGGCAGCGGCTTCGGCCTTGGCCTTTTCCACGGGGGCAATAGTGCCACTGTTGGCCGCAGCGTTTATAAGGCAGTATAGGCTCCGGCTCGGGGTGGTGGTGGTGGCAGTCACAGTGGCGCTGGTAGGGTTCGGTTGGCTGGGTGCAGCATTAGGGAAGGCGCCAACCATCAGTTTTCAAATCTCTCTCTTTAACCTTAACTGCATAGCTTATCTGTTTCAAGCAATGATATTCTCATTTAAAATGTCAACAGATTTGAAACTTTTCACACCTATATAG 669 51.87 MSTLSQSSSLNSCTKFPHPPHDHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIERNKDHRKELEEEEREKLPNPLQAAAASALAFSTGAIVPLLAAAFIRQYRLRLGVVVVAVTVALVGFGWLGAALGKAPTISFQISLFNLNCIAYLFQAMIFSFKMSTDLKLFTPI 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9353617 9354918 - ClCG09G009650.2 Cla09g00903 280323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00903 222 MobiDBLite consensus disorder prediction 1 22 - -
Cla09g00903 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 191 IPR008217 GO:0005384|GO:0030026
Cla09g00903 222 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 27 191 - -
Cla09g00903 222 MobiDBLite consensus disorder prediction 1 15 - -
Cla09g00903 222 Coils Coil 103 123 - -
Cla09g00903 222 Pfam VIT family 115 188 IPR008217 GO:0005384|GO:0030026
Cla09g00903 222 Pfam VIT family 42 123 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g00903 Cla-Chr9:9353617 Cla09g01380 Cla-Chr9:24849392 1.39E-67 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00903 K22736 - csv:101210510 311.997