Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g00969 ATGATAAAGCAAGCGCACTCATTGATTCAAATTCCCAACGAAACCCAATTCATCGGATTCAAAAGCATTGGCAGAGTCAGATTCTGTTTGTCGATCCTTCAATCCTCCGCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGCAACCACCATCGCCGGCCTCCCATGGCCGCCTCCGCCGCCGCGGATAACCCATCATCCACCTCTTCATCCTCCTCCAACCCTTTCATTTTCTCCCCCGATCCTCCCCCTAGACTTCCTCTCACACCCCATCAGATTAAGCTTTGTTCCGAAGCTCTTGAGGCCTTCAGGGAGAAGCTTCAGATGCCTGATGTCATCAACCAGGAGTTCGCCCGATTGCAGGCCAAGAGAATAACTGTATCTGATATGAAGAGAAGTTGCTCTGTGGCACTTGACAATGTCAACATAAATAAAAATCGTTACACGGATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGCAAGGATTACAGACCTTCCGCAAGGGGTTATATCAATGCAAGCTTTATTTCGACTTCCTCCTCAAAAAGCCTTTCTAAATTTATTGCTACACAAGGTCCATTACCACACACTTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCTGAAGATGGTCCTAGAGATTTTGGTAATCTAATTGTTATCTCTAAATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGTTGAACCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGCTGAAGAGGCTGTATCATTTACCTCCCGATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTGCTGGAGACATGTCTGCTTTAGATCTTGTCAATACCATTGCGACATTTAGGTCCCAGCGAATTGGAATGGTTCAAACACTGGATCAATACTTTTTCTGCTATAGAACTATTGTTGATGAACTAGAAGACCTTCTATCTGTTCCACAGTAG 1188 44.02 MIKQAHSLIQIPNETQFIGFKSIGRVRFCLSILQSSAFQIRPLGNLTSTRSRNHHRRPPMAASAAADNPSSTSSSSSNPFIFSPDPPPRLPLTPHQIKLCSEALEAFREKLQMPDVINQEFARLQAKRITVSDMKRSCSVALDNVNINKNRYTDVLPFDETRVVLDSCKDYRPSARGYINASFISTSSSKSLSKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLIVISKWIKSSNSSLILRHLELNHKESEESVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLVNTIATFRSQRIGMVQTLDQYFFCYRTIVDELEDLLSVPQ 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10183010 10189615 + ClCG09G010370.2 Cla09g00969 280389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g00969 395 MobiDBLite consensus disorder prediction 47 87 - -
Cla09g00969 395 ProSitePatterns Tyrosine specific protein phosphatases active site. 323 333 IPR016130 GO:0016311|GO:0016791
Cla09g00969 395 ProSiteProfiles PTP type protein phosphatase domain profile. 117 386 IPR000242 GO:0004725|GO:0006470
Cla09g00969 395 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 60 392 - -
Cla09g00969 395 SMART PTPc_3 116 388 IPR000242 GO:0004725|GO:0006470
Cla09g00969 395 Gene3D Protein tyrosine phosphatase superfamily 93 392 IPR029021 -
Cla09g00969 395 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 302 377 IPR000387 GO:0016311|GO:0016791
Cla09g00969 395 SMART ptp_7 283 385 IPR003595 -
Cla09g00969 395 MobiDBLite consensus disorder prediction 65 80 - -
Cla09g00969 395 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 389 IPR029021 -
Cla09g00969 395 PRINTS Protein tyrosine phosphatase signature 320 338 IPR000242 GO:0004725|GO:0006470
Cla09g00969 395 PRINTS Protein tyrosine phosphatase signature 282 299 IPR000242 GO:0004725|GO:0006470
Cla09g00969 395 PRINTS Protein tyrosine phosphatase signature 177 184 IPR000242 GO:0004725|GO:0006470
Cla09g00969 395 PRINTS Protein tyrosine phosphatase signature 353 368 IPR000242 GO:0004725|GO:0006470
Cla09g00969 395 PRINTS Protein tyrosine phosphatase signature 369 379 IPR000242 GO:0004725|GO:0006470
Cla09g00969 395 PRINTS Protein tyrosine phosphatase signature 195 215 IPR000242 GO:0004725|GO:0006470
Cla09g00969 395 CDD PTPc_plant_PTP1 178 380 - -
Cla09g00969 395 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 60 392 - -
Cla09g00969 395 Pfam Protein-tyrosine phosphatase 146 384 IPR000242 GO:0004725|GO:0006470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g00969 - - bhj:120086129 678.322