Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01009 ATGTTGAGGTTGTTGGTTATTGAGTTTAAGGAGCAGCTAGTTTTGGATAAAGCACTTCGCTTCCTCGTCGATGCTTCGAAGACGATCGCTTTCGCTTTCTTCCTATCTCTTCTCGCTCTAGTTGGTGCGTCGGTGGGGACAGTGATCGGAGCTTTCAAAGGCCATGGTGTGGCCATAGGCGCTATTGCCGGCGCCGCCGTAGTCCTTCAGATATTGAGCTGCACTGCATCTGGGCATAGATATTCTTTATCAAAGGAAGCAATAATGGAGAGGCTGATGGATGGGAAGGGGTTGATGAACTGGGCGAGCAGCTTCTCGGAGTATATGTATCGAGAGATATCGGAGTTGGTCGACGTCGCCGGAGAAAGTTGTGTAGAAGGGATGTCAATGGAGAGAGTTCAAATGTTGCCTATTTGTGAATGTGATCATAGCAAGATGAACAACTCCATTTCTTGTACCATTTGCTTAGAGGTAATACTTAAACTATGGAAGGTACAATTCTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTCAATGCTGTTGGGTAAACTTCAAATTACTTGCTTACTCATTCCTTTGTATGTTATGGACCATGATAAACACAAGGCTACCGAGTTACGACAGAATCACATTTGTATTCTTTACTCTGAACATTTGGCACCATTGATTCTCTTGAAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCATTTCTTGGAAAGCCAAATGAGGAGTATTGTTCTTGGATTCTTAATTCAGAGAAGTGGGGAGGTGCAATCGAGCTTTCAATACTATCCGAATATTATGGGCGTGAAATAGCAGCATATGATATCCAGACCACACGATGTGACTTGTACGGTCAGGAAAAGAATTATTCAGAAAGGGTTCTGCTAATATATGATGGACTCCACTATGATGCTTTAGTTATGTCTCCATCTGAGGAAGCTCCAGAGGAATTTGATCAGACCATCTTTTCGGTGAATAGAGACAGGACGATTGGGCCGATTGAGGAGCAAGCTCTTCATTTTGTTAAAGAGCAACAAAGGAAAAGGAGATTCACTGACACTGCCAACTTCACGCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATTGGCCAAGCGGAGGCTGTGGAACACGCAAAAGCCACTGGACATGTCAACTTTCAAGAGTATAGATGA 1200 43.92 MLRLLVIEFKEQLVLDKALRFLVDASKTIAFAFFLSLLALVGASVGTVIGAFKGHGVAIGAIAGAAVVLQILSCTASGHRYSLSKEAIMERLMDGKGLMNWASSFSEYMYREISELVDVAGESCVEGMSMERVQMLPICECDHSKMNNSISCTICLEVILKLWKVQFLEGLFHQTTVASSMLLGKLQITCLLIPLYVMDHDKHKATELRQNHICILYSEHLAPLILLKVIAATVASDPTRYSEAFLGKPNEEYCSWILNSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKNYSERVLLIYDGLHYDALVMSPSEEAPEEFDQTIFSVNRDRTIGPIEEQALHFVKEQQRKRRFTDTANFTLRCGVCQIGVIGQAEAVEHAKATGHVNFQEYR 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10599380 10609248 - ClCG09G010800.2 Cla09g01009 280429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01009 399 SUPERFAMILY Cysteine proteinases 224 316 IPR038765 -
Cla09g01009 399 Gene3D - 203 364 - -
Cla09g01009 399 PANTHER UBIQUITIN THIOESTERASE OTU1 190 397 - -
Cla09g01009 399 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 190 397 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01009 K13719 - csv:101222942 357.451