Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g01010 | ATGGTTGAATTAGACTACCAGATCCCATCCGCATTTGATCCATTCGCCGAAGCCAAGGATTCGGATGCCCCCGGAACCAAAGAGTATGTTCATATTCGCGTCCAACAAAGGAATGGGAAGAAGTGCTTGACTACAGTCCAAGGTCTGAAGAAAGAGTTTAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGTAAGAACGTCTCTCAGTTTCTTGTTCATGCTGGTCTGGTCAAGAAGGATCAGATCAAGATTCATGGGTTTTGA | 339 | 43.95 | MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF | 112 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10620803 | 10621141 | - | ClCG09G010810.1 | Cla09g01010 | 280430 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g01010 | 112 | CDD | eIF1_SUI1 | 28 | 111 | IPR005874 | GO:0003743 | |
Cla09g01010 | 112 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 7 | 112 | IPR005874 | GO:0003743 | |
Cla09g01010 | 112 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 30 | 100 | IPR001950 | GO:0003743|GO:0006413 | |
Cla09g01010 | 112 | PIRSF | Transl_init_SUI1_Euk | 1 | 112 | IPR005874 | GO:0003743 | |
Cla09g01010 | 112 | Gene3D | - | 2 | 112 | - | - | |
Cla09g01010 | 112 | PANTHER | PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG | 1 | 112 | - | - | |
Cla09g01010 | 112 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 112 | - | - | |
Cla09g01010 | 112 | Pfam | Translation initiation factor SUI1 | 27 | 100 | IPR001950 | GO:0003743|GO:0006413 | |
Cla09g01010 | 112 | SUPERFAMILY | eIF1-like | 4 | 112 | IPR036877 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00178 | Cla-Chr2:1817252 | Cla09g01010 | Cla-Chr9:10620803 | 1.06E-54 | dispersed | |
Cla09g01010 | Cla-Chr9:10620803 | Cla10g00503 | Cla-Chr10:6673912 | 2.30E-74 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g01010 | K03113 | - | csv:101202908 | 224.172 |