Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01036 ATGATGATGATTACACGTGGACATGGGACCCACGGTTTACCTTGTGGAGTTAGGGATTTTCAGTCCAATTTGCTCAGAGCCAAATTCCGTCGTTCTGATTTCCGATTCCGATTGATCGACGAACGTTGGTCGCCGGCGGTGGGGGATTTGTATCGTCTTCCATTTGAATTCAATCAATCCCCATACAATTCCACAGCCGCCCGCTTTTCCGAACGGGGCAATTTTCGGGGTGTTTGTTGGTTTGTTCCATGGTCAATGGCGTATACATTGGAATCGTGGACGAAGGAATACAATGAAGCTTTGAAACTGTCTGAAGATATCAATGGCATGATTTCTGAGAGAAGTTCACTTGCTGCATCTGGACCGGAAGCTCAGCGTCATGGCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCAGAGAAAGAGATGAATCGCCGCAGGGACATGATTGCAAATTTGAGATCAAAAGCTAAGCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGGGATAGCTTACTTGGTCCAGAAATAAAGCCAGCTGATGTCATGAACAGAACAGAAGGCTTGGACAACCGAGGCCTAGTTGAGCAAGATGAAGGCCTTGAGAAACTGGAAGGGACTATAATTAGCACAAAACATATTGCATTAGCCGTCAATGAAGAACTTAACCTTCACACGAGACTTATTGATGATTTGGATGAACATGTCGATGTTACAGATTCCCGATTACGGCGAGTGCAGAAGAGGCTGGCAATACTGAACAAGCGGACCAAGGGTGGTTGCACTTGCATGTCAATGATTTTATCAGTTGTTGGGATTGTCGTTCTTATCGCTGTCATATGGCTACTGGTCAAGTATTTGTAA 933 44.91 MMMITRGHGTHGLPCGVRDFQSNLLRAKFRRSDFRFRLIDERWSPAVGDLYRLPFEFNQSPYNSTAARFSERGNFRGVCWFVPWSMAYTLESWTKEYNEALKLSEDINGMISERSSLAASGPEAQRHGSAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKAKQMASTLNMSNFANRDSLLGPEIKPADVMNRTEGLDNRGLVEQDEGLEKLEGTIISTKHIALAVNEELNLHTRLIDDLDEHVDVTDSRLRRVQKRLAILNKRTKGGCTCMSMILSVVGIVVLIAVIWLLVKYL 310
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 10956463 10959268 + ClCG09G011110.2 Cla09g01036 280456
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01036 310 Gene3D - 216 278 - -
Cla09g01036 310 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 91 305 - -
Cla09g01036 310 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 219 276 IPR000727 -
Cla09g01036 310 Pfam SNARE domain 251 301 IPR000727 -
Cla09g01036 310 CDD SNARE_Qc 219 274 - -
Cla09g01036 310 SMART tSNARE_6 208 276 IPR000727 -
Cla09g01036 310 PANTHER SYNTAXIN 91 305 IPR045242 -
Cla09g01036 310 SUPERFAMILY SNARE fusion complex 218 275 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01036 Cla-Chr9:10956463 Cla10g00459 Cla-Chr10:6069528 6.30E-117 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01036 K08503 - csv:101208669 397.512