Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01095 ATGGAGCTATTTCCAGCACAACCAGATTTATCACTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCATCTTGGAGAAGAACAAGTAGTTCTTCACAAGAAGAAGTTGATTTGGGGTTTTGGAATAATCTTAGTTTGGAGTCTTCTTCTAAATCCACTCCCAAACATCATCATCCGCATCATCATCATCTTCATCATCTTCATCCTCACTCTTGTTTTGATCTCTCTCTCTCAAATTTAACCCAAATTAACCATCATCAATACCCAAACATATCTCCTCCTCCTAGTACTCCTAATCATCTTCTTCTTCATCATCATCATCATCATCATCATCGTTATCCCGCTCTCGATACCACCGCACACCTTTTCGAAACCCTAAACAAAACCCACCACCGACCCGCCATTTTCCACCAGACGCCATCACTTGACCCGCCACCACCTCCCTCGCTCCCGTTTCCGGGCCAAACCAATGGGCAAGACTTGGGATTTTTGCGACCCATTAGAGGAATTCCAGTGTACCATCAGACGAATAACCCCTCCGGCACCGGAAACGGCGGTGTTGTCACTCCCTCCGCTGCTGGTCACGGCCAGATTATGATGCGATCGAGATTCTTGTCGAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCTCGGATGAGATGGACTTCCACTCTTCATGCTCGCTTTGTTCATGCTGTTGAACTTCTTGGTGGCCATGAAAGAGCTACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACTTTAGCTCATGTCAAATCTCATTTACAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGCAGCTTCTTCAGGACAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGACATTCAAAAACCAGCCATGGGAAGACAAAATGACAACTCAATTCAACAAACAACAAGGCAAAACCCTCACCAAGATAAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTACCAAATGATTCTTCTAGGGACCTTTCTTCATCCCTCGAGAATGATACGGATCCAAAGTGCTCAAACAATGAGAGACTATCAGAAATAAGCTCATCAACAGATCTTTGTGGTGTGACAAATAATCCTCATCAAAAGCCTAATTTAGAATTCACATTAGGAAGGCCAATTTGA 1218 43.84 MELFPAQPDLSLQISPPNTNKPSSSWRRTSSSSQEEVDLGFWNNLSLESSSKSTPKHHHPHHHHLHHLHPHSCFDLSLSNLTQINHHQYPNISPPPSTPNHLLLHHHHHHHHRYPALDTTAHLFETLNKTHHRPAIFHQTPSLDPPPPPSLPFPGQTNGQDLGFLRPIRGIPVYHQTNNPSGTGNGGVVTPSAAGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPAMGRQNDNSIQQTTRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDTDPKCSNNERLSEISSSTDLCGVTNNPHQKPNLEFTLGRPI 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11716157 11721241 - ClCG09G011660.1 Cla09g01095 280515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01095 405 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 404 - -
Cla09g01095 405 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 218 271 IPR006447 GO:0003677
Cla09g01095 405 MobiDBLite consensus disorder prediction 49 68 - -
Cla09g01095 405 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 404 IPR044847 GO:0000976|GO:0006355|GO:0010158
Cla09g01095 405 MobiDBLite consensus disorder prediction 1 32 - -
Cla09g01095 405 SUPERFAMILY Homeodomain-like 215 271 IPR009057 -
Cla09g01095 405 MobiDBLite consensus disorder prediction 11 32 - -
Cla09g01095 405 Gene3D - 217 274 - -
Cla09g01095 405 MobiDBLite consensus disorder prediction 348 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01991 Cla-Chr5:31705358 Cla09g01095 Cla-Chr9:11716157 1.38E-35 dispersed
Cla08g01528 Cla-Chr8:28030490 Cla09g01095 Cla-Chr9:11716157 4.23E-39 dispersed
Cla09g01095 Cla-Chr9:11716157 Cla01g02323 Cla-Chr1:37024547 2.73E-19 dispersed
Cla01g00856 Cla-Chr1:10482717 Cla09g01095 Cla-Chr9:11716157 7.36E-41 transposed
Cla04g00689 Cla-Chr4:21667713 Cla09g01095 Cla-Chr9:11716157 3.77E-23 transposed
Cla05g01126 Cla-Chr5:11752117 Cla09g01095 Cla-Chr9:11716157 2.95E-53 transposed
Cla10g00132 Cla-Chr10:1371990 Cla09g01095 Cla-Chr9:11716157 2.24E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61731 None None None None Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01095 - - bhj:120077162 692.575