Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g01116 | ACGCACGAAGCGAAACCCACACAACCTCCTTCGGCAACCGCGACCACAGCGCCGACGACCTCCTTGCGGGCAAACCGGACTTACCATCGCCACCAGTCAATGCTCATTCCTACTGCTGTCAATGCCCTCAAATCCTCAAGGTCAATATCTTGGTTGCCGACTGGTAGGCTTCAACAAACCTTGGCGAGATGTCTGGAGCTGAGTGGGATATCTCTGCATTCGGGGAAGGTTTCGAAAGTGAAATTATGTCCGGAATTTGCAGGTCGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCCTCAATCAATTATGCCGAAGAGTCGCCTCTTTGTACCACACTTTCTAAGGATGGGTTCAAAATTCGAACAGTTGAGCATTTGCTTTCTGCCATGGAGGCTATGGGGGTTGACAATTGTAGGATCGAGATAGCGAATGAAGATGATAAAGATAGTGAAGTGGAGGTACTTGTGATCGGGACAGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGAGGAGATTGGTCTTAAGTTGGCTATAGACCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGACTGTTATCTTGTTGCTTTTCCAGCCTCAGCAGTTTGTATCACTTATGGAATTGACTTTCCTCAGGTGCCTGACATTGGCCGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCTCCATCAAGAACCTTTTGCATTTATGAGGAGGTAGAGCAAATGCGTAATATGGGACTCATAAAAGGAGGCTCCATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTAATTGGGGATCTGTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGTTTACAAGAAAACATTTGAGTGGACAAGCAACTATTTTCCCTTGCAAAAGTGTGAAAATATTTTGCAACCGAGTACTAGCACATCAATGGTCTTAGAGATAAATAATGTTGATGTTGACATTGATATGGAAGCATTAGGTGAGAATTTTAACTATAATATTAGACAAACGTTCAAAAGGGTTGAGAAAACAAGTTTTGTTAAAGATTTAGGGACT | 1212 | 43.98 | THEAKPTQPPSATATTAPTTSLRANRTYHRHQSMLIPTAVNALKSSRSISWLPTGRLQQTLARCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASINYAEESPLCTTLSKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDKDSEVEVLVIGTVPIFDGSAGKWVDAIEEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVCITYGIDFPQVPDIGRQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMRNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDLIGDLSLFAQLGSQGIPVAHIVVYKKTFEWTSNYFPLQKCENILQPSTSTSMVLEINNVDVDIDMEALGENFNYNIRQTFKRVEKTSFVKDLGT | 404 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 12148868 | 12168161 | - | ClCG09G011820.1 | Cla09g01116 | 280536 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g01116 | 404 | Pfam | UDP-3-O-acyl N-acetylglycosamine deacetylase | 58 | 337 | IPR004463 | GO:0008759|GO:0009245 | |
Cla09g01116 | 404 | TIGRFAM | lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | 58 | 335 | IPR004463 | GO:0008759|GO:0009245 | |
Cla09g01116 | 404 | PANTHER | UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED | 34 | 340 | IPR004463 | GO:0008759|GO:0009245 | |
Cla09g01116 | 404 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 202 | 337 | IPR020568 | - | |
Cla09g01116 | 404 | Gene3D | lpxc deacetylase, domain 1 | 56 | 187 | IPR015870 | GO:0008759|GO:0009245 | |
Cla09g01116 | 404 | Gene3D | lpxc deacetylase, domain 2 | 199 | 343 | IPR011334 | GO:0008759|GO:0009245 | |
Cla09g01116 | 404 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 57 | 182 | IPR020568 | - | |
Cla09g01116 | 404 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g01116 | K02535 | - | csv:101205101 | 552.362 |