Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01116 ACGCACGAAGCGAAACCCACACAACCTCCTTCGGCAACCGCGACCACAGCGCCGACGACCTCCTTGCGGGCAAACCGGACTTACCATCGCCACCAGTCAATGCTCATTCCTACTGCTGTCAATGCCCTCAAATCCTCAAGGTCAATATCTTGGTTGCCGACTGGTAGGCTTCAACAAACCTTGGCGAGATGTCTGGAGCTGAGTGGGATATCTCTGCATTCGGGGAAGGTTTCGAAAGTGAAATTATGTCCGGAATTTGCAGGTCGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCCTCAATCAATTATGCCGAAGAGTCGCCTCTTTGTACCACACTTTCTAAGGATGGGTTCAAAATTCGAACAGTTGAGCATTTGCTTTCTGCCATGGAGGCTATGGGGGTTGACAATTGTAGGATCGAGATAGCGAATGAAGATGATAAAGATAGTGAAGTGGAGGTACTTGTGATCGGGACAGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGAGGAGATTGGTCTTAAGTTGGCTATAGACCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGACTGTTATCTTGTTGCTTTTCCAGCCTCAGCAGTTTGTATCACTTATGGAATTGACTTTCCTCAGGTGCCTGACATTGGCCGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCTCCATCAAGAACCTTTTGCATTTATGAGGAGGTAGAGCAAATGCGTAATATGGGACTCATAAAAGGAGGCTCCATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTAATTGGGGATCTGTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGTTTACAAGAAAACATTTGAGTGGACAAGCAACTATTTTCCCTTGCAAAAGTGTGAAAATATTTTGCAACCGAGTACTAGCACATCAATGGTCTTAGAGATAAATAATGTTGATGTTGACATTGATATGGAAGCATTAGGTGAGAATTTTAACTATAATATTAGACAAACGTTCAAAAGGGTTGAGAAAACAAGTTTTGTTAAAGATTTAGGGACT 1212 43.98 THEAKPTQPPSATATTAPTTSLRANRTYHRHQSMLIPTAVNALKSSRSISWLPTGRLQQTLARCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASINYAEESPLCTTLSKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDKDSEVEVLVIGTVPIFDGSAGKWVDAIEEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVCITYGIDFPQVPDIGRQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMRNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDLIGDLSLFAQLGSQGIPVAHIVVYKKTFEWTSNYFPLQKCENILQPSTSTSMVLEINNVDVDIDMEALGENFNYNIRQTFKRVEKTSFVKDLGT 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12148868 12168161 - ClCG09G011820.1 Cla09g01116 280536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01116 404 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 58 337 IPR004463 GO:0008759|GO:0009245
Cla09g01116 404 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 58 335 IPR004463 GO:0008759|GO:0009245
Cla09g01116 404 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 34 340 IPR004463 GO:0008759|GO:0009245
Cla09g01116 404 SUPERFAMILY Ribosomal protein S5 domain 2-like 202 337 IPR020568 -
Cla09g01116 404 Gene3D lpxc deacetylase, domain 1 56 187 IPR015870 GO:0008759|GO:0009245
Cla09g01116 404 Gene3D lpxc deacetylase, domain 2 199 343 IPR011334 GO:0008759|GO:0009245
Cla09g01116 404 SUPERFAMILY Ribosomal protein S5 domain 2-like 57 182 IPR020568 -
Cla09g01116 404 MobiDBLite consensus disorder prediction 1 23 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01116 K02535 - csv:101205101 552.362