Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01169 ATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTCTGAACTTCTTCTTATCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTGTTGGTTGAGTATTTGCAATCTCCTAGTGATGTCCCAGGACCTTCGTCGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCCGTGTCTCTGTCTTCTAATATCTTTGATAACCTTCCAAAAGCCTGGTTCATATACTTGTTCATTGCTGTGGGAGTCATTATCTTTGTTGTCTCTTGTTTTGGGTGTATTGGAGCTGCAACACGTAATGGATGCTGTTTAAGTTGTGTATCCTATTTGCCTGCACGGCTGCATTGTAGTTTGATTTATGAATTATTGATGAAACAATTAGGCCACCAGGGAACAATTGGTTGGCTTTCAGATAATTACACTCTTCATAGAGATAAGATGTATTCAGTTTTGCTGCTTCTACTGATTTTGGTGCAACTAGGATGTGCTGCCTTCATATTCTTTGACAAAACTTGGAGAGATGAAATTCCTGGGGACAAAACAGGAAACTTTGATAAGATCTATGAACTCCTTGAAGACAAGTGGGAAATCATCAGATGGGTTGCATTGGGAGCTGTAATTTTTGAGGCCCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGCAGACTATGACAGCGATGATGAGTACATTGCTCCAAGGCAACAAATCAGACAACCATTGATCAATAGGCCTGCTGCTCCTGCAACAGGTGTGCCTGTGGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCAGAGTTCACATACAACCCATCTGAGTCTCACAGTGTTTTAGAGGGTACGGATGCTTGTGTCCACTTGTATCCGCTTGTGTATAACCAGAGATGGATGGGTCAGCATAGGACCAAGGAAAATGATTGTAAGCTCCATCTCGCTTGGGGAAAGACTGCTGGCTGGAAGTTACTTTTAATTATATTGGTGGTTGTAATATTTGGTGTAGTTTTGCATGGAATTGAAACTTTAGGCGATGGACTTTTGGTTTTTGACTATTACAAAGAAACATGCCCTTTTGTCGAAGATATCATTCGACGACAAGTTGAGATAGCTGTGCTCAAGGATCCTCGAATGGCTGCTTCACTCCTTCGCTTGCATTTTCATGATTGTTTTGTTATGGGATGTGATGCATCAGTTCTTTTGGACAGCAATGATGAGATGGTGAGCGAAAAGCAAGCAGCTCCAAATTTAAACTCTCTTCGCGGTTTCAATGTTATCGATGAGATAAAATACATATTGGAAGAAGCTTGTCCTTACACTGTGTCTTGTGCTGATATTTTGACCATTGTCGCTCGTGATGCTGTTGTGCTCAGAGGAGGCCCTGGATGGCCAGTGTTATTGGGAAGGAAAGACTCCTTGGAAGCAAGCTTTGATGGAGCCAACAAATACATTCCTTCTCCCAATTCCTCCCTTGAGACCCTAATTGCCAATTTTCAACAACAAGGTCTTAATGTTGGAGACTTGGTTGCTCTATCTGGAAGCCACACCATAGGGAAAGCAAGATGCTTGAGCTTTAGGCAAAGAGTATACCAAATGAATCCAGAAGAAGAATATGACAGATACAAGAGATACAACACATACAGAAGAATTTTAAGGTCAATCTGCCCTAAAACAGGGCAGGATCAAAGGGTAGCACCCCTAGATTTTAGGACACCTTCAAGATTTGACAATCACTATTTCCTCAACATTCTTGAAGGTAAAGGGCTTTTGGGGTCTGACAATGTGCTCATAACTCAAGACCATGAAGGTGAAATCACAAGACAAGTTTGGAGTTATGCCTCTGACCAAACCCTTTTCTTTGATTCCTTTGTTAAGTCCATTGTCAAGATGGGCAACATCAATGTCCTCACTTCCCATCAAGGTGAAGTCAGAAGGAATTGTAGGTTTACCAATCATTAG 2031 42.69 MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSPSDVPGPSSSGDHDLVQLGRPMLMAVSLSSNIFDNLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCVSYLPARLHCSLIYELLMKQLGHQGTIGWLSDNYTLHRDKMYSVLLLLLILVQLGCAAFIFFDKTWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLLALVVRAANRPADYDSDDEYIAPRQQIRQPLINRPAAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESHSVLEGTDACVHLYPLVYNQRWMGQHRTKENDCKLHLAWGKTAGWKLLLIILVVVIFGVVLHGIETLGDGLLVFDYYKETCPFVEDIIRRQVEIAVLKDPRMAASLLRLHFHDCFVMGCDASVLLDSNDEMVSEKQAAPNLNSLRGFNVIDEIKYILEEACPYTVSCADILTIVARDAVVLRGGPGWPVLLGRKDSLEASFDGANKYIPSPNSSLETLIANFQQQGLNVGDLVALSGSHTIGKARCLSFRQRVYQMNPEEEYDRYKRYNTYRRILRSICPKTGQDQRVAPLDFRTPSRFDNHYFLNILEGKGLLGSDNVLITQDHEGEITRQVWSYASDQTLFFDSFVKSIVKMGNINVLTSHQGEVRRNCRFTNH 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13907680 13918056 - ClCG09G012320.1 Cla09g01169 280589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01169 676 PANTHER PEROXIDASE 72-RELATED 349 674 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Plant peroxidase signature 405 425 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Plant peroxidase signature 606 623 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Plant peroxidase signature 530 542 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Plant peroxidase signature 590 605 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Plant peroxidase signature 649 662 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Plant peroxidase signature 464 474 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Plant peroxidase signature 445 458 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Plant peroxidase signature 381 400 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Plant peroxidase signature 483 498 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 Pfam Peroxidase 389 630 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 Gene3D - 376 675 - -
Cla09g01169 676 PRINTS Haem peroxidase superfamily signature 592 607 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Haem peroxidase superfamily signature 403 417 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Haem peroxidase superfamily signature 483 495 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Haem peroxidase superfamily signature 531 546 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 PRINTS Haem peroxidase superfamily signature 465 482 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 SUPERFAMILY Heme-dependent peroxidases 373 675 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 ProSitePatterns Peroxidases proximal heme-ligand signature. 531 541 IPR019793 -
Cla09g01169 676 Pfam Tetraspanin family 9 112 IPR018499 GO:0016021
Cla09g01169 676 ProSitePatterns Peroxidases active site signature. 403 414 IPR019794 GO:0004601
Cla09g01169 676 ProSiteProfiles Plant heme peroxidase family profile. 371 675 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01169 676 Gene3D Peroxidase, domain 2 509 655 - -
Cla09g01169 676 CDD secretory_peroxidase 372 674 IPR033905 GO:0004601|GO:0042744
Cla09g01169 676 PANTHER PEROXIDASE 20 349 674 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01943 Cla-Chr1:34110056 Cla09g01169 Cla-Chr9:13907680 3.63E-105 dispersed
Cla02g01721 Cla-Chr2:32094053 Cla09g01169 Cla-Chr9:13907680 7.30E-20 dispersed
Cla07g00147 Cla-Chr7:1708153 Cla09g01169 Cla-Chr9:13907680 5.74E-15 dispersed
Cla09g01169 Cla-Chr9:13907680 Cla03g00023 Cla-Chr3:273791 1.45E-93 dispersed
Cla09g01169 Cla-Chr9:13907680 Cla07g00832 Cla-Chr7:23049341 8.74E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01169 K00430 - csv:116402797 576.63