Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01192 ATGAAGGGTTTCAATATCTCTTCTTTGAGTGTTGCTTTTCCAAGCCAGTTAGCAGTTTATCTTGACTGTGATATGTCACCTTGGTATATGGATAAACCGTGGGAGGATTTGCTTCCATCAGAGTGGGACAAAGTATTTCGTTTTGGTACCAAGAATGGGAAACCGGCTGAAGGTCTTGCTAAGAAACACAGCTATATCTTGCAACCGGTGTCTGGATATGCAAGGTATACAAAGTTGCGGGAAAATGATCTTGCAGATAGCCGTGAACCTCTACAGAAAGCATCAGTATATTTGGATGATGTGACACTCTGTTTGTCAAAGAATGGGTATAGGGATATTCTAAAGTTGGTTGATAATTTTGCTGCATTCAATCAGCGATTGAAGTATGCTCATTATCGGCCTCATGTTTCTGTGAAAACTGATCCTGGTTCCTGGTGGAAGTATGCTTTTAATTCAATTTCTGACCAGTTGAAGAAGGGAAGTGGAAAAATGACATGGGAGCAGGTTCTGAAGTTTGCCAACTTACGCAAGAGATATATCTCTTTGTATGCTTCGTTGCTTAAATCTGATCCTACACGTGCAATTGTTAATGATGACAAACATATTGAGGAACTTGATCGTGAACTTGATATTGAGCTCATTCTTCAATGGAGGACCAAAAGCTGGAACGGCGGCCTTGATAAACACTATCCTCCGCCACCCACCACCCACAATGAAGTTATTTCCGACCCCATTGTTTTTTGGGACACGTTGAGGCATTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGACTTGCATGTTTTATATTCAGAAGTCACAAGAAGAGGACATGTAAAGGTTGTTGCAGAGAAGAAATGGAGAGAAGTTGGAAGTGTGTTTAAGTTTTCTCCTACAACAACGAGTGCTTCATTTGTATTGAGAAAACATTATCTAAGTCTTCTTTACCATTACGAGCAAGTTTACTTGTTTGGCCGGCAGGGCCCCGTCTTTGTCCTTCAAGTGCCATTTTCTTTTGGTAGCCCTACCAGTGAAAACAAATTGGCTCTTGTGGAATATACCCCCAAAACTACGTTGTGTTCGCCTGGTCCGCCTGCTGAAGTTACTGGAACAATTGATGGGAAATTCTACTGGGAGCAGCCACCTCCCTCAGATCTCCGGCCTCAGTCTACCAATGCCATTGTACCGTATACCGGCGGCAGACATCGATATTCTGGTAGGCGGCACCGGAAAAAGGGAGATCCAAACCACGCAAAACCAAACAGAAGTGGGTATAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAAAGGGAGTTCACTAAGATGATTGGAGAGTCTTGTAACAATCTTAGCCCTGAAGAAAGGATGGTTTATCAAAACATTGGGTTGAAAGACAAGGAAAGATACAAGCGAGAGTTGAAAGAGTATAAGGAGAAAATGAGGCAGCAACCAATGTTGATGGAGCTAACTATTCAAAACATGGGAGTAGCAGAGGAGGAAGAGAATTCAGCGGTTTTTAGGATGCTCGCTCACAAGTTTGTTCAAAAGTCGGTGGAATCTGATCAGTACTTGAAGAAAGCAAAAGCAAAAAAATCTTGGTGGCCATTTGGATGGAACAATCAATCATTCAAAGATGAAGAAGAACAATTTTTTAGCCAAGAAGACTGGGAACAACTGAACAAATTTATAGGGTACAAGGAAGATGAAAATTCACTGTCCATCATAAACATTGGCAAAGTGGACACTCTTCTTACTTCTTTGGAGGTTCACATGAACCGTAATGCTTCAAAGCTTACGGATGAGGCTCAACATTGTCTTGCTGAACTGTCATGTGAAGACCTTAATTGTTCCATGAAATTTTTTCCAGAAACGAAAGTTTTTGATATCAATTTGGGGTCATATCAACTATCTTCTCCAAGTGGTCTCCTTGCTGTGAGTGCTGCTGTTCATGATTCATTGGTTGGTATCTTCTGTTACAAGCCATTTGATACTAAAGTGGACTGGAGCTTGGTTGTGAAGGCTTCTCCTTGTTACATGACTTATCTCAAAGATGCCATTGAACAAATTGTGAGCTTCTTTGAGAGCAGCACTGCTGTTGGTCAGACCGTGGTGTTGGAAACAGCAGCTGCCTTACAGATGACAATTGATGAAGTTAAGCGCAGTGCTCAAAACCAGGTGAATAGAGCATTGAAAGATCGTTCAAGGTTTTTGCTGGACTTGGATATTGCAGCTCCTAAGATTACAATTCCTGCGGAGCTTCATCTTGATGATATTAGTTCGATAAAGCTTCTGATTGATTTGGGTAATTTATTGATTCGATCACAGGATTACCATGAAAACGTGTCTTCTCAAGAGTTGGATATGTATTTGCAATTTGATGTGGTCTTGAGTGATGTCTCTGCCTTTCTGGTTGATGGCGATTACAACTGGAATCAAATTTTTGGCAAAGATACTCATAAATCTTCGCGTGTAGCGGACATTAATATCTTGCCTGTTATCGATAAATGTGGGGTTATCTTAAAGCTGCAACAGATTCGATTGGAGAATCCGTCTTACCCTTCAACCAGACTTGCAGTGCGATTGCCTTCCCTAGGGTTTCACTTTTCGCCAGCAAGGTATCACAGACTGTCAAAAATTCTGAAGATCTTTCAGGAGGATAATGGAAATTCAGATGTTCCTCAACTGTGGAATCAAGCTGACTTTGAGGGGTGGCTATCTGTTCTTATTAGGAAGGGTGTTGGAAACAGGGAGGCTGAATGGCAACGACGATACTGTTGTCTAGTAGGGCCCTACCTCTACTTAATTGAAAGCCCAGGATCCAAATCTTACAATCGCTATCTCAGCTTAAGAGGAAAACAAACCATTCAAGTGCCCGCAGAGTTGGTTGGGGAGGTGCAACATGTTTTGGCTGTTTACGATGCTTCACGATCAAATAGCAAGGTTGTGGAGGATTCTAATGCCCTCATATTGAGATTTGATTCTGATGATTCAAGGAAAATTTGGCAAAATCGCTTGCAAGGAGCCATATATCGTGCTTCGGCCTCTGCTCCTATTTTGGGTCTATCTGAAACTTCCTCAAACTCCGAGGACTCAGAAATGGAACCAGATGAAAGTGATGGTACCCTGGATTCATCTATAGAGAGTGTATTTTTGACTGGTTCTCTCGATGAACTTAAAGTCTGTTTCAGTTCTAGTAATCAGCATGACCTGGACTTTGAGAAGGTCCTGCTTGCAGAAGAGAGAAATTTGATTGAGTTCCGGGCAATTGGTGGTCAGGTTGAGCTGTCAATGAGATCGAATGACATGTTTATTGGCACTATACTGAAGTCTTTGGAAATCGAAGACTTAGTTTGTTCGAAGACCAATTCTCAATCTTGTTATCTGGCAAGATCATTTGTCCATGGCGAAGAGACACCTTTATTTTCTGATTACTCAAAAAATCAAGGTTCTTATAACAATGATTTAACTCAAATGGAAGGTGATGAGAAATTCTTTGAGGCAGCTGAAACCTTGGTTGACTATGCTGATTATCAGATACAGTCACCTGGAAAAGGTCTTGAGTATGTAAAATCTCAAAGTTCGCTCCAATTGAAAAGTTTTGCACCCCCCAGTTTTTCACGTATTGTTGGTCTGCTTCCACCTGGTGGCTCTGAAACTCATAGCGTGGATAATGAGCAATCTGTTACATTAGATAATTTTGTAAAAGCTCAGATAGCTTTTTATGACCAAAATTCTCCTCGATACTATGATGTAGACAAACAGGTTTCCATTACCTTGGCTACGCTGTCATTTTTCTGTCGTAGACCTACTGTTTTAGCCCTTATTGAGTTTGCCAATGCCATTAACTTGGAGGAAGAAAGTTGTGAATCATTCAGTGATAATTCATCATCAGGCATCATAAAGCATGATATCCTAGTGGAAGAGGATGAACAGATTCCTAAGAACATGGAGGATGACATTGTGAAAGGTTTGCTAGGAAAAGGGAGGTCTAGAGTTGTGTTCAATTTAGAATTGAAGATGTCTCGTGCACAAATTTTTCTAGTGAAGGAAAATGAAAGTAATCTAGCAAGTTTGTTTCAGGACAACTTGCTTGCTAATATCAAGGTGTTCCCGTCCTCCTTTAGTATAGAGGCTGCTCTTGGAAATCTGAGAATAAGTGATGATAGTCTTTCAAGCAGCCACAAGTATTATTGGGCATGTGATATGAGGAATCCTGGTGGCAGTTCTTTTGTTGAGCTATTCTTTTCTTCATTCAACGTTGATGATGAAGATTACAATGGTTATGAATACAGTCTTCTGGGGAAGCTTTCAGAAGTACGCGTTGTATATTTGAATCGATTTATCCAGGAGGTTGTTAGTTACTTTATGGGTCTCGTCCCTGAAAATGCTGAGGGTGTTGTAAAGTTAAAAGATCAAGTAACAAATTCAGAGAAGTGGTTTACCACTACTGAAATAGAAGGTTCACCTGCTTTGAAGTTGGATCTTTCTCTTTCAAAGCCTATTATATTAATGCCTCGAAGGACAGACAGCCTTGATTATTTGAAGCTTGATATTGTCCACATTACCATTCAGAACACATTTCAGTGGATTTCTGGGAGTAAAACAGACATTGGTGCTGTGCATTTGGAAATTTTAACTGTTATGATCGATGACATCAATTTAAATGTTGCCGTGGGAGCGGAATTAGGGGAAAGCATAATTGAAGATGTCAAGGGGGTTTCAGTGATCATCCGCAGGTCACTTCGGGATTTGTTGCGCCAAATACCAAATTTAGAAATTGGAATTCAGATAGAAGTGTTGAAAGCAGTTCTTTCAAACAAAGAGTACCAGATTATCACTGAATGCGCAATTTCAAATATCTCTGAGACAGCAAATGTAGTACCTCCATTAAAAATGATTTCTGCTGCTTCAACTGATATGATAGAACCTGATACTCGCCAGGTTCTAAATGGGACAGAATCTGAAACAAGTGAACCATCCTCAGTGTCAATGAAACTCTCTGTTATTATTGACCTGGTTCAGTTGTGCTTACGTGCAGGAATATCAGGAGATGCATCTTTAGCCACTGTGCAGGCTAATAATGCATGGGTATTGTACAACTCCAATACAAATGGTGAAGGTTTTCTTTCAGCAACACTCAAGGGTTTCACAGTTCTTGATGACCGTGAGGGAACTGAACTGGAATTCAGGCGGGCAATTGGAGTTGCTAACAGCATTGGCACAGCTCAGCTGATCAAACCGACTTATAAGCACAATCAACTCTCGAGTGATGCAAGTACCATAGAAGAAAATATTTCTCGTGCAGTTCCTACAATGCTTATTCTCGATGCAAAATTCACACAGTTTTCAACATTTGTTTCGTTATCAGTTCAAAAACCTCAACTTCTTGTTGCACTTGATTTTCTCCTGGCTGTTGCTGAATTTTTTGTTCCAACCGTTGGCAATATACTGTCAGATGAAGAAGATAAGAGCTATTTACATGTTACTGATGCTGTTATCTTGGATCAGTCACCCTATAGGCAGCTATCATCGGAACTGCATATATCTCCTGGAAAACCTTTAGTGGCAGATGATGAAAATTTTGACCATTTCATCTATGATGGTAATGGTGGAGTCATGCACTTAACGGATAGGAATGGAGTTGATCTATCAGCACCTAGCAAGGAGGCAATGATATATGTTGGAAATGGGAAGAAATTGCAGTTCAAAAACATCACTATCAAAGGTGGACAATTTTTAGATTCTTGTGTTTTTATGGGTACCAACAGTAGTTATTCAGCATCGAAGAAAGATGAGGTGTACTTGGAGTTGGGGGATAACGTCATCCAACGAAGCTTTGAAGATGTACAATCTCAAGATATCACCAGCAACAAGTCTACTGAGTATACTATTGAATTGCAGGCAATTGGACCAGAGCTGATTTTCTACAACACATCAAGGGGAGTAGGAGAATCAACAATCCTCCAGAACCAACTTTTGCATGCTCAACTGGATGTATATTGCAGGTTTCTTCTGAAAGGTGATACGACTGAATTTAGTGCAAATGCACTTGGTTTGACCATGGAGAGTAATGGAATCCGGATTCTGGAGCCCTTTGATTCCTCAGTAAATTATTCAAATGCTTCTGGAAAGACAAATATACATTTTTCTGTTTCAGATATATTTATGAACTTTTCATTCAGCATCTTGAGGCTGTTTTTAGCTGTTGAAGAGGACATTGTGGCGTTTCTAAGAATGACGTCAAAGAAAATGACTGTAGTATGCTCCGAGTTTGACAAAGTCGGAATAATCAAAAGTCTGAACAGTGATCAAGTATATTCTTTTTGGAGGCCTAATGCTCCACCTGGTTTTGCAGTTTTGGGTGATTATGTGACACCATCTGAAAAGCCACCAACGAAAGGAGTTCTTGCAGTGAATACCAGTTTTGCAAGAGTAAAGCGACCTATATCTTTCAGACTAATATGGCCGCCCATAGCTTCTGAAGACATTTCTAGTTATCACATCAACAATTATGATTCTTCACCTGGTGATCATAGTCTAGGCCATGAGGATTGCTTTTATTCCATTTGGTTTCCTGAAGCACCCAAAGGATATGTTGCACTTGGCTGTGTTGTCTCCAATGGAATTATGCAACCCCCTTTGTCTTCTGTCTTCTGTGTCGCCACTTCCTTAGTTTCTGTTTGTTCCTTGAGGGACTGCATAAGTATCAGCACCAGTGTACCGTGCCATTCAAATTTTGCTTTATGGCGTGTGGACAATGCTGCTGGATCTTTCTTGCCAGCAGATCCAACAACTTTTAGTGTGAGAGGTACTGCATATGAACTGCGTCGTACTATATTTGGGTTTCCTGAAGTGTATCATGAAATGCCTAAGAGTTCAGATAGCCATGGTTCACCTAGTCAAACTGAGACTTTGCATTTGGAGAAATCACTTATTGTAACTTCTGGTCAGCGTTTTGAGGCTGTTGCTAACTTTCAGTTGATATGGTGGAATCGAGGATCAAATTCCAAGAAGAAATTATCAATATGGCGTCCAGTTGTTCCTCAGGGGAAGATTTATTTTGGTGATGTTGTTATTAAAGGATTTGAGCCTCCAAATACATCTATCATTCTCAATCATACTGGAGATGAAGAGTTATACAAGTCCCCACTGGATTTCCAACTTGTGGGACAAATCAAGAAGCAAAGAGGAATGGAAGATATATCTTTTTGGTTGCCAAAAGCTCCTCCAGGGTTTGTTTCCTTGGGTTGTATTGCATGCAAAGGTAAGCCTAAGCTACAAGACTTCAGCGCGTTGGGTTGCATGCGGATGGATATGGTAACATGGGATCAGTTCGTGGAGGAAAGTGCCTGGGATTCTTCAGATGCCAAGCAAATAACCGAGCCATTCAGCATATGGATAGTTGGTAATGAGTTAGGGACCTTCGTTGTGCGGAGTGGGTCTAAGAGGCCTCAGAGGAGTTTCAATCTTAAGCTGGTGGATTCACATGTAACAAGTGGTTCAGACAACACTGTAATTGATGCAGAAGTGAGAACGTTTTCTATAGCAGTTTTTGATGACTATGCTGGTTTGATGGTTCCATTATTCAATATATCACTTAGCGGGTTGGGATTTAGTCTTCATGGAAGAAAAGGATATTTAAATTCGGTCGTGAACTTCTTTTTGGCTGCCAGATCATATAATGATAAGGTCGAATCTTGGGAGCCACTTGTTGAACCTGTAGATGGATTTCTGAGGTACCACTATGATCAAAATGCCCCTGGATCAGCTTCTCAGTTGCATCTTACCTCAGCTAGGGATTTAAATTTGAATATTTCAGCGTCTAGTATCAATATGCTCATTCAAGCATATGCAAGCTGGATCAACCTCACGCATGTTCAGGAGCATGACAAAACAAGAGACCCGTTGTTTTCCACTTCTGGTGGAAAAAGCATCGGTGATGTGCATGCCAAGAGAGACTATTTTATCATCCCCCAAAACAAACTTGGTCAGGATATTTACATCCGAGCTACTGAAATACGTGGTCTTCAAAATGTAATTAGGATGCCTTCAGGGGACATGAAGCCCTTAAAAGTTCCTGTTTCAAAGAACATGTTAGATTCCCATTTGGAAGGAAAACATTTTAAGAAAGATAGAAGAATGGTGACGGTAATAATTTCTGATGGACAGTTGCCAAGGGTTGAAGGACCAGCTGTTCACCAATATACTGTAGCTGTTCGTCTTACTCCCATCCAAGGAGTTTTTGCTGAATTGCAACATCAACAGAGTGCACGCACATCCAGTAGTAGCTCAGACCACTCATTATCTGCTGAGGTTGACTTGGTCTACTGGAATGAAATATTCTTTTTCAAAGTTGAATCCCCGGAAAAATATATGCTGGACTTGATGGTAACAGATGTTGGAAAAGGTGATGCTACTGGATTCTTTTCTACACCTTTAACACAGATAGCGCATAGCTTGGAGGATGAACTTCATTTGCATGATCGCGTGATTATGTCAAGTTGTATAGAACTTTCTTCACCCGAATTGGGGAAAACATGCAAGTTCAGTGGAAGGTTAAATTGTACTGTGCTTTTGTCGGCTAAACCGGAATTTGAGAACAATAATCAATCCCAAAGTAAAGGAAGAAAATCTGGATCTATTCAAATAAGTCCAAGCAGGACTGGCCCTTGGACTACTGTTAGGTTAAACTATGCTACACCTGCTGCTTGTTGGCGTTTAGGGAATGATGTCATTGCCAGCCAAGTCACTGTTAAGGACGGCAGCCGATATGTGACAATTAGGTCTCTCGTCTCAGTGCAGAACAATACTGATTTTATACTTGATGTCTGCCTCATGTCCAAACATTGCAAGGAAGGCATACATCTCCGGGATGAAACTGGTAATTCTGATGGTTCAACAGCCGATAGTAACATGGTTACAGAAGAGTTCTATGAAACTGAAAAGTACAGCCCCACTGCTGGCTGGGTTAGCTGCCTGAAACTCAGTCAGGATTTCTCAGAAGGAATTATTCCAGAGATAACATCAAGAGTTGAGCTACCGTCAGGTTGGGAATGGATTGATGATTGGCATTTGGACAAGACACCTCATACTGCTGCTGATGGTTGGGTTTATGCTCCAGATGTCAAAAGTTTAAAATGGCCTGATTCTTCCGACTCTGTGAAATCTGTAAACCATGCAAGGCAAAGGAGGTGGCTCAGAAGTAGGAGACAGATAATAAACAATATAAAGAAGGAAATATTCATAGGACAATTGAAGCCTGGTGATATGGTTCCCCTACCTTTATCGGCGCTGAAACATTCTGAACTTTATATATTTCATTTTAGGCCTTCGATTCTTAATAATTGTGACGAGTACTCTTGGAGTTCAGTCGTAGATAAACCTAATCAAGAGGATGTTAATGGACCTGATATTTTCTCTGAAATATGTATTTCAACCCTACATGAATCCGAGGAGTTGTTGTATTGTGTTCAAACAAGCGGAACCTCATCAAGTAGTTCCCACAGATTGTGGTTTTGTTTAGGCGTACAAGCATTGGAAATTGCCAAAGATATACACTCTGACCCTATTCAGGACTGGAATCTTGTTATCAAGGCTCCATTATCTATTGCGAATTACCTTCCACTTGTGACAGAATTTTCTGTTCTAGAGAAACAGAAAAGTGGCCATTTCATTGATTGCTGCAGAGCAATCCTTCATCCAGGGAAAACTGTGAAGGTCTATGATGCTGATATCAGAAATCCATTGTTCTTTTCACTCCTCCCACAGAGGGGATGGCTTCCTGTACATGAAGCAGTTCTTATATCTCACCCTCATGGAGTTCCTTCAAGAACATTAAGTTTGAGAAGTTCAATTACTGGAAGGGTTGTTCAAGTTATTCTTGAACAAAATCATGATAAGGAGCATCCATTCCTGGAGAAGATCATCAGATTCTATGCACCTTACTGGTTTTCTATTTCTAGGTGTCCTCCTCTCACACTCCATCTTGTAGACAGATCAGGGAGAAAAAATTCACGAAAGATTTATAACCGGTTTAAGTCCAAAGCTAATACTGACATATTTGAGGAAATAACTGAAGAAGAAATACACGAGGGTTACACAATCGCTTCTGCTCTGAACTTCAATTCGTTGGGCCTCTCTGTGTCAATTAATCAAACTGGGAAGAACCAGTGTGTAACTGTTGAAGATCTATCTCCTTTAGGCGACATGGACGGATCCTTAGACCTCTATGCTTGTGATGATGATGAGGGAAAGCATATGCAGCTTTTCATTTCAACAAAACCATGTCCCTATCAGTCTGTACCAACCAAGGTGATTTTAGTCCGTCCATTCATGACCTTTACCAACCGGCTTGGTCATGACATCTTCATTAAGTTAAGTGATGAAGATGAACCAAAAGTTCTCCGTCCGTGTGATTCAAGAATTTCATTTGCATTTCAGAAAACTCGTGGACATGATAAATTCCAGGTACGTTTAGAGGATACCAATTGGTCACTTCCTCTTCAAATTATAAAGGAAGATACAATATTTTTGGTCTTGAGGAGATATGATGGTACTCGTACATTTTTGAGGATGGAAATTCGTGGCTATGAAGAAGGATCACGTTTTATCATCGTGTTTCGCGTTGGATCAGCAGATGGCCCCATCAGGGTTGAGAACAGAACTGACAATACAATCAGCTTACGTCAGAGTGGGTTTGGTGAAGAGGCTTGGATTTTATTGCCACCCCTTTCAACAACAAATTTTTCTTGGGAGGATCCTTATAGTCAACATTTCTTAGACACTAAAATTAATAGTGATGGTAGTATTGGAGTCTGGAAACTTAATACAAGCACTGGATTTTGCTCTTTAGAGGATGGCGAAATAGAATTATGCTGCTATGTGGCGAAAGAGGGTGATATTAAAGTAGTTAGGTTCAGAGGCAGTCGGCAATTGGAAGCTGACTTTCATGAAGAGATTGGATACTTAACAGCGGCAAGAAATTGGAGGTCTCAAATGCAGAAACCGGTGCAGGATAGTGAAGCAGCACCTACTGAGCTTATAGTTGAGTTAGGAGTTGTGGGCATTTCTGTTATAGACCACAGGCCAAAAGAGCTGGCTTATATGTACTTGGAGAGAGTTTTTATCTCATATTCAACTGGATTTGATGGTGGAACAACAAATAGGTTCGAGATCAAATTTGGTAATTTGCAGCTTGATAATCAACTCCCCCTGACATTGATGCCAGTGCTGTTGGCTCCTGAGCAGACCACAGATATAAATCACCCAGCATTCCGTATGACCATAACAATGCAGAATGAGAACATTGTTGGAATCCGAGTCTTCCCATACATTTGTGTGCAGTTTACAGAGAAATCTTGGAGGCTTAACATTCACGAACCAGTCATTTGGGCTATTGTTGATTTGTATAATAATCTTCAGCTAGGTCGTTTACCCCAAAGTTCTAGTATCACCCAAGTTGATCCAGAAATACGCATCAAACATATCGCAGCAGAGGTCGAAGGTGCGAAGCAGCAGAAGACTCTGAAGTGTGGATCTGACACAGCGAAGACGGAAACGTACACGAATGGAGAAGTCGCGGATGGAGACGTCGACGACGGCAGAGGTCGAAGCCTAATAGAAATTTCTGAAGTGAAGCTGAAAGTGGTTCTGGAGCCAGCACCAGCACAAAGGCCCCATGGAGTTCTAGGCATCTGGAGCCCCATACTGTCAGCTGTAGGGAATGCGTTCAAGATACAGGTGCATCTAAGAAGAGTAATGCACGAGGATAGATACATGCGTGAAAGTTCAATTCTTCCTGCCATTGGAAACCGTATCTGGAGGGACTTTATTCACAATCCTTTACACCTAATATTTTCATTAGATGTACTTGGCATGGCAAGTTCAACATTGGCTTCACTTAGCAAAGGGTTTGCCGAACTTTCAACTGATGGCCAGTTCTTGCAATTACGGTCAAAGCAGGTATGGTCACGGAGAATTACTGGTGTACGTGATGGTATAATCCAGGGCACAGAAGCTCTTGCTCAGGGTGTTGCTTTTGGTGTGTCAGGCGTGGTAACAAAGCCTGTGGCAAGTGCTAGACAGAATGGTTTACTTGGTCTAGCTCATGGTTTAGGACGTGCGTTTCTTGGATTTATTGTACAACCAGTTAGTGGAGCATTAGATTTTTTCTCACTGACCGTTGATGGAATTGGTGCAAGTTGTTCCAAGTGTTTAGAGGTTTTCAACAAGAAGGTTTCTTTCCAAAGAGTTAGAAACCCGCGGGCCATCCATGCTGACAGTATTCTTAGAGAATACTGCGAGAGAGAAGCTGTTGGGCAGATGGTTCTTCATCTTGCTGAAGGAAGTACACATTTTGGTTGTACTGAAATTTTCAAGGAGCCTTCAAAATTTGCATTTTCTGATTATTATGAAGAACACTTTATTGTACCGTACCAGAGAATTGTTTTGGTTACCAACAAGAGAGTCATGCTGCTACAGTGCTCAGATCCAGGAAAATTGGATAAGAAACCTTGCAAGATTCTGTGGGATGTTCCATGGGAGGAGCTCATGGCACTAGAGTTGGCAAAAGTGGCTAACAGTCAGCCTTCTCACTTAATCATCCATTTAAAAAGTTTCAAGAGGACAGAAAATTTTGCACGTATTATAAAGTGTCATATTGAAGAAATTTCGGGAAGAGAACCTCAAGCTGTTAGAATTTGTTCAGTGGTGAGTAAATTGTGCAAAGAGTATCAAGCTGACATGAAATGCCTTGTCCTGAAGGTTCCGTCGAGCCAGAGACATGTTTATTTTTCCTACAGTGAAGCTGATGGGAGAGATGCAAATAGTTTAAACAAATCCATTATTAGATCGAGGGAGCTTTTGTCATCCAGTTTCTCAAATGATGAGGGAAGGTTTGTGAAACACAGTATGAACTTTACAAAGGTTTGGAGCAGCGAACTAGAGTTAAAAGGTCGTTGCATATTGTGCAAAAAGCAGGCCCTGGAGACAGGAGGGATATGTACCATATGGAGACCAATATGCCCCGACGGGTACGTCTCCATTGGGGATATAGCACATCTCGGCATCCATCCTCCAAATGTTGCTGCTATTTACCGTCACGTGGAGGGAATGTTTTTACCGCCAGTGGGTTATGATTTGGTATGGAGAAACTGCCAAGACGACTATGTAACTCCTGTATCAATCTGGCATCCAAGGGCTCCAGAAGGCTTTGTCTCTCCAGGATGTGTTGCAGTTGCCGATTTTGCTGAGCCAGAGCCTAACTTGGTATATTGTGTGGCCGAATCTCTTGCTGAGGAGACAGTATTTGAGGAGCAGAAGATTTGGTCAGCACCAGATGCATACCCTTGGGCATGTCATATCTACCAAATTCAAAGTGATGCGCTTCACTTCGTCGCTCTCAGACAAATCAAGGAAGAATCCGACTGGAAGCCTATGAGAATTCTAGATAATCCCCCCAGTCTGTTGCCCACATCAGGAAATCTCTGA 13536 41.21 MKGFNISSLSVAFPSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSREPLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSGKMTWEQVLKFANLRKRYISLYASLLKSDPTRAIVNDDKHIEELDRELDIELILQWRTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGHVKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPVFVLQVPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWEQPPPSDLRPQSTNAIVPYTGGRHRYSGRRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQQPMLMELTIQNMGVAEEEENSAVFRMLAHKFVQKSVESDQYLKKAKAKKSWWPFGWNNQSFKDEEEQFFSQEDWEQLNKFIGYKEDENSLSIINIGKVDTLLTSLEVHMNRNASKLTDEAQHCLAELSCEDLNCSMKFFPETKVFDINLGSYQLSSPSGLLAVSAAVHDSLVGIFCYKPFDTKVDWSLVVKASPCYMTYLKDAIEQIVSFFESSTAVGQTVVLETAAALQMTIDEVKRSAQNQVNRALKDRSRFLLDLDIAAPKITIPAELHLDDISSIKLLIDLGNLLIRSQDYHENVSSQELDMYLQFDVVLSDVSAFLVDGDYNWNQIFGKDTHKSSRVADINILPVIDKCGVILKLQQIRLENPSYPSTRLAVRLPSLGFHFSPARYHRLSKILKIFQEDNGNSDVPQLWNQADFEGWLSVLIRKGVGNREAEWQRRYCCLVGPYLYLIESPGSKSYNRYLSLRGKQTIQVPAELVGEVQHVLAVYDASRSNSKVVEDSNALILRFDSDDSRKIWQNRLQGAIYRASASAPILGLSETSSNSEDSEMEPDESDGTLDSSIESVFLTGSLDELKVCFSSSNQHDLDFEKVLLAEERNLIEFRAIGGQVELSMRSNDMFIGTILKSLEIEDLVCSKTNSQSCYLARSFVHGEETPLFSDYSKNQGSYNNDLTQMEGDEKFFEAAETLVDYADYQIQSPGKGLEYVKSQSSLQLKSFAPPSFSRIVGLLPPGGSETHSVDNEQSVTLDNFVKAQIAFYDQNSPRYYDVDKQVSITLATLSFFCRRPTVLALIEFANAINLEEESCESFSDNSSSGIIKHDILVEEDEQIPKNMEDDIVKGLLGKGRSRVVFNLELKMSRAQIFLVKENESNLASLFQDNLLANIKVFPSSFSIEAALGNLRISDDSLSSSHKYYWACDMRNPGGSSFVELFFSSFNVDDEDYNGYEYSLLGKLSEVRVVYLNRFIQEVVSYFMGLVPENAEGVVKLKDQVTNSEKWFTTTEIEGSPALKLDLSLSKPIILMPRRTDSLDYLKLDIVHITIQNTFQWISGSKTDIGAVHLEILTVMIDDINLNVAVGAELGESIIEDVKGVSVIIRRSLRDLLRQIPNLEIGIQIEVLKAVLSNKEYQIITECAISNISETANVVPPLKMISAASTDMIEPDTRQVLNGTESETSEPSSVSMKLSVIIDLVQLCLRAGISGDASLATVQANNAWVLYNSNTNGEGFLSATLKGFTVLDDREGTELEFRRAIGVANSIGTAQLIKPTYKHNQLSSDASTIEENISRAVPTMLILDAKFTQFSTFVSLSVQKPQLLVALDFLLAVAEFFVPTVGNILSDEEDKSYLHVTDAVILDQSPYRQLSSELHISPGKPLVADDENFDHFIYDGNGGVMHLTDRNGVDLSAPSKEAMIYVGNGKKLQFKNITIKGGQFLDSCVFMGTNSSYSASKKDEVYLELGDNVIQRSFEDVQSQDITSNKSTEYTIELQAIGPELIFYNTSRGVGESTILQNQLLHAQLDVYCRFLLKGDTTEFSANALGLTMESNGIRILEPFDSSVNYSNASGKTNIHFSVSDIFMNFSFSILRLFLAVEEDIVAFLRMTSKKMTVVCSEFDKVGIIKSLNSDQVYSFWRPNAPPGFAVLGDYVTPSEKPPTKGVLAVNTSFARVKRPISFRLIWPPIASEDISSYHINNYDSSPGDHSLGHEDCFYSIWFPEAPKGYVALGCVVSNGIMQPPLSSVFCVATSLVSVCSLRDCISISTSVPCHSNFALWRVDNAAGSFLPADPTTFSVRGTAYELRRTIFGFPEVYHEMPKSSDSHGSPSQTETLHLEKSLIVTSGQRFEAVANFQLIWWNRGSNSKKKLSIWRPVVPQGKIYFGDVVIKGFEPPNTSIILNHTGDEELYKSPLDFQLVGQIKKQRGMEDISFWLPKAPPGFVSLGCIACKGKPKLQDFSALGCMRMDMVTWDQFVEESAWDSSDAKQITEPFSIWIVGNELGTFVVRSGSKRPQRSFNLKLVDSHVTSGSDNTVIDAEVRTFSIAVFDDYAGLMVPLFNISLSGLGFSLHGRKGYLNSVVNFFLAARSYNDKVESWEPLVEPVDGFLRYHYDQNAPGSASQLHLTSARDLNLNISASSINMLIQAYASWINLTHVQEHDKTRDPLFSTSGGKSIGDVHAKRDYFIIPQNKLGQDIYIRATEIRGLQNVIRMPSGDMKPLKVPVSKNMLDSHLEGKHFKKDRRMVTVIISDGQLPRVEGPAVHQYTVAVRLTPIQGVFAELQHQQSARTSSSSSDHSLSAEVDLVYWNEIFFFKVESPEKYMLDLMVTDVGKGDATGFFSTPLTQIAHSLEDELHLHDRVIMSSCIELSSPELGKTCKFSGRLNCTVLLSAKPEFENNNQSQSKGRKSGSIQISPSRTGPWTTVRLNYATPAACWRLGNDVIASQVTVKDGSRYVTIRSLVSVQNNTDFILDVCLMSKHCKEGIHLRDETGNSDGSTADSNMVTEEFYETEKYSPTAGWVSCLKLSQDFSEGIIPEITSRVELPSGWEWIDDWHLDKTPHTAADGWVYAPDVKSLKWPDSSDSVKSVNHARQRRWLRSRRQIINNIKKEIFIGQLKPGDMVPLPLSALKHSELYIFHFRPSILNNCDEYSWSSVVDKPNQEDVNGPDIFSEICISTLHESEELLYCVQTSGTSSSSSHRLWFCLGVQALEIAKDIHSDPIQDWNLVIKAPLSIANYLPLVTEFSVLEKQKSGHFIDCCRAILHPGKTVKVYDADIRNPLFFSLLPQRGWLPVHEAVLISHPHGVPSRTLSLRSSITGRVVQVILEQNHDKEHPFLEKIIRFYAPYWFSISRCPPLTLHLVDRSGRKNSRKIYNRFKSKANTDIFEEITEEEIHEGYTIASALNFNSLGLSVSINQTGKNQCVTVEDLSPLGDMDGSLDLYACDDDEGKHMQLFISTKPCPYQSVPTKVILVRPFMTFTNRLGHDIFIKLSDEDEPKVLRPCDSRISFAFQKTRGHDKFQVRLEDTNWSLPLQIIKEDTIFLVLRRYDGTRTFLRMEIRGYEEGSRFIIVFRVGSADGPIRVENRTDNTISLRQSGFGEEAWILLPPLSTTNFSWEDPYSQHFLDTKINSDGSIGVWKLNTSTGFCSLEDGEIELCCYVAKEGDIKVVRFRGSRQLEADFHEEIGYLTAARNWRSQMQKPVQDSEAAPTELIVELGVVGISVIDHRPKELAYMYLERVFISYSTGFDGGTTNRFEIKFGNLQLDNQLPLTLMPVLLAPEQTTDINHPAFRMTITMQNENIVGIRVFPYICVQFTEKSWRLNIHEPVIWAIVDLYNNLQLGRLPQSSSITQVDPEIRIKHIAAEVEGAKQQKTLKCGSDTAKTETYTNGEVADGDVDDGRGRSLIEISEVKLKVVLEPAPAQRPHGVLGIWSPILSAVGNAFKIQVHLRRVMHEDRYMRESSILPAIGNRIWRDFIHNPLHLIFSLDVLGMASSTLASLSKGFAELSTDGQFLQLRSKQVWSRRITGVRDGIIQGTEALAQGVAFGVSGVVTKPVASARQNGLLGLAHGLGRAFLGFIVQPVSGALDFFSLTVDGIGASCSKCLEVFNKKVSFQRVRNPRAIHADSILREYCEREAVGQMVLHLAEGSTHFGCTEIFKEPSKFAFSDYYEEHFIVPYQRIVLVTNKRVMLLQCSDPGKLDKKPCKILWDVPWEELMALELAKVANSQPSHLIIHLKSFKRTENFARIIKCHIEEISGREPQAVRICSVVSKLCKEYQADMKCLVLKVPSSQRHVYFSYSEADGRDANSLNKSIIRSRELLSSSFSNDEGRFVKHSMNFTKVWSSELELKGRCILCKKQALETGGICTIWRPICPDGYVSIGDIAHLGIHPPNVAAIYRHVEGMFLPPVGYDLVWRNCQDDYVTPVSIWHPRAPEGFVSPGCVAVADFAEPEPNLVYCVAESLAEETVFEEQKIWSAPDAYPWACHIYQIQSDALHFVALRQIKEESDWKPMRILDNPPSLLPTSGNL 4511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14759850 14834471 + ClCG09G012520.1 Cla09g01192 280612

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01192 4511 Pfam HMG (high mobility group) box 427 493 IPR009071 -
Cla09g01192 4511 PANTHER - 3447 3843 - -
Cla09g01192 4511 MobiDBLite consensus disorder prediction 2882 2902 - -
Cla09g01192 4511 SMART ARID_2 238 327 - -
Cla09g01192 4511 MobiDBLite consensus disorder prediction 1037 1058 - -
Cla09g01192 4511 Gene3D High mobility group box domain 411 502 IPR036910 -
Cla09g01192 4511 SMART hmgende2 425 494 IPR009071 -
Cla09g01192 4511 PANTHER - 517 3347 - -
Cla09g01192 4511 PANTHER - 3887 4484 - -
Cla09g01192 4511 MobiDBLite consensus disorder prediction 410 424 - -
Cla09g01192 4511 Pfam SHR-binding domain of vacuolar-sorting associated protein 13 3435 3605 IPR009543 -
Cla09g01192 4511 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 3447 3843 - -
Cla09g01192 4511 Gene3D - 237 336 IPR036431 GO:0003677
Cla09g01192 4511 ProSiteProfiles ARID domain profile. 241 331 IPR001606 GO:0003677
Cla09g01192 4511 PANTHER - 16 218 - -
Cla09g01192 4511 SMART bright_3 242 332 IPR001606 GO:0003677
Cla09g01192 4511 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 426 493 IPR009071 -
Cla09g01192 4511 Pfam Vacuolar protein sorting-associated protein 62 2104 2267 IPR009291 -
Cla09g01192 4511 Pfam Vacuolar protein sorting-associated protein 62 2331 2483 IPR009291 -
Cla09g01192 4511 Pfam Integral peroxisomal membrane peroxin 3024 3083 IPR010482 -
Cla09g01192 4511 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 517 3347 - -
Cla09g01192 4511 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 3887 4484 - -
Cla09g01192 4511 CDD ARID_HMGB9-like 243 327 IPR045303 GO:0003677
Cla09g01192 4511 Coils Coil 479 499 - -
Cla09g01192 4511 Pfam Repeating coiled region of VPS13 676 897 IPR031642 -
Cla09g01192 4511 Gene3D - 912 1030 IPR011993 -
Cla09g01192 4511 ProSiteProfiles PH domain profile. 914 1026 IPR001849 -
Cla09g01192 4511 SUPERFAMILY PH domain-like 913 1030 - -
Cla09g01192 4511 Pfam ARID/BRIGHT DNA binding domain 247 327 IPR001606 GO:0003677
Cla09g01192 4511 Pfam Vacuolar sorting-associated protein 13, N-terminal 16 184 IPR031646 -
Cla09g01192 4511 SUPERFAMILY ARID-like 239 341 IPR036431 GO:0003677
Cla09g01192 4511 SUPERFAMILY HMG-box 417 498 IPR036910 -
Cla09g01192 4511 Pfam PH domain 917 1025 IPR001849 -
Cla09g01192 4511 MobiDBLite consensus disorder prediction 396 430 - -
Cla09g01192 4511 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 16 218 - -
Cla09g01192 4511 SMART PH_update 915 1028 IPR001849 -
Cla09g01192 4511 CDD HMGB-UBF_HMG-box 427 490 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01192 K19525 VPS13A_C; vacuolar protein sorting-associated protein 13A/C - csv:101212417 7244.05
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00726 Cla-Chr5:6835947 Cla09g01192 Cla-Chr9:14759850 4.67E-31 dispersed
Cla05g01592 Cla-Chr5:26937857 Cla09g01192 Cla-Chr9:14759850 1.95E-174 dispersed
Cla06g00753 Cla-Chr6:10036298 Cla09g01192 Cla-Chr9:14759850 1.03E-40 dispersed
Cla09g01192 Cla-Chr9:14759850 Cla09g01195 Cla-Chr9:14857744 7.12E-96 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g579 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy04g00040 . Blo03g00821 . Bda07g00127 . . Bpe11g00358 . . . . Cmo19g00390 . . . . . . . . . . . . . Cla09g01192 Cam09g1259 Cec09g1274 Cco09g1310 . . Cre09g1223 . Csa03g04662 . Cme04g00049
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla10g00008 . 340 610 ARID Transcription Factor Family AT1G20910 61.4 1.5e-91 333.6
Cla05g01592 . 16 309 ARID Transcription Factor Family AT1G76110 67.8 5.6e-111 397.9
Cla09g01192 . 228 497 ARID Transcription Factor Family AT1G76110 58.2 7.7e-84 307.8
Cla10g00008 . 319 640 ARID Transcription Factor Family AT1G76510 60.2 1.8e-109 393.3
Cla07g01362 . 1 793 ARID Transcription Factor Family AT3G43240 57.5 2.9e-261 898.3
Cla09g00122 . 2 770 ARID Transcription Factor Family AT3G43240 57.9 1.4e-258 889.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006969 1 2 4 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 2 37
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61745 PF06650 SHR-BD 9.50E-13 No_clan Cla TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla09g01192 Cla_Chr09 FPKM 2.871516 3.277369 1.302476 1.240594 1.6173 1.951084 1.571065 6.368464 5.694588 5.978693