Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01380 ATGGCTTCCTTTCATGCAGAAGCTTCTGAGTCTGGCAGTGTTCATTATACTCAGCGAGCTCAGTGGCTGCGAGCAGCAATTCTCGGGGCCAACGATGGGCTCGTCTCCGTTGCATCACTGATGATGGGCGTTGGAGCCGTGAAGCCCGATGCCAAAGCCATGCTTATTGCTGGATTTGCGGGGCTGGTTGCTGGAGCTTGCAGTATGGCGATCGGAGAGTTTGTCTCTGTTTACACCCAATATGATATAGAGAAAGCTCAGCTGAAGAGAGATGGGAAAGAAAAGAAAAAGAGCATACAACCAAACGACCAGGCTGAGGAGGAAGAGAAGCTGCCAAATCCATTACAGGCTGCACTCGCATCAGCGATAGCGTTTTCGATTGGAGCAGTCATTCCTTTGCTGGCAGCGGTGTTTATCCAAGACCATAAGGTGAGGCTCGGGGTGGTCGCAGCGGTGGCGAGCGTGACGCTGGCAGTTTTCGGGGTAGTTGGAGCCATTTTGGGGAGAACTCCGGTGGGGAAATCGGCGGCAAGAGTGGTTGTTGGAGGGTGGATGGCAATGGCCATTACTTTTGGCCTTACAAAGCTGCTTGGGTCTAAGGGACTGTGA 609 52.87 MASFHAEASESGSVHYTQRAQWLRAAILGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQLKRDGKEKKKSIQPNDQAEEEEKLPNPLQAALASAIAFSIGAVIPLLAAVFIQDHKVRLGVVAAVASVTLAVFGVVGAILGRTPVGKSAARVVVGGWMAMAITFGLTKLLGSKGL 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 24849392 24850618 - ClCG09G014180.1 Cla09g01380 280800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01380 202 MobiDBLite consensus disorder prediction 92 111 - -
Cla09g01380 202 Pfam VIT family 107 194 IPR008217 GO:0005384|GO:0030026
Cla09g01380 202 Pfam VIT family 23 105 IPR008217 GO:0005384|GO:0030026
Cla09g01380 202 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 9 199 - -
Cla09g01380 202 MobiDBLite consensus disorder prediction 92 110 - -
Cla09g01380 202 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 9 199 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g00707 Cla-Chr8:19341799 Cla09g01380 Cla-Chr9:24849392 1.37E-88 dispersed
Cla09g00903 Cla-Chr9:9353617 Cla09g01380 Cla-Chr9:24849392 1.39E-67 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01380 K22736 - csv:101214875 342.043