Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01499 TTCCCATTTCCATGCAAACTTCATCCCAAACAAACCTCTACTTCTTTTCTCAATTCTCTTATTCCAATGACAAGACTTCGTTTTAATTCAATGCTCGTCTTGGTTGTGTCTGTCGCGGTGATATTCACCTTTTGTAGCACTCTCGTGCATGGCCAAGCTACACGCATTGGCTTCTACTCCAACTCTTGCCCTCAAGTCGAGTCCATTATTGCATCAACAGTCCGATCTCATTTTCAATCTGACCCTAGAATTGCTCCAGGTTTGTTAAGAATGCACTTCCATGACTGTTTCGTTCGGGGTTGTGATGCTTCTGTGCTTCTTGCTGGCTCCAATAGCGAGAGGACTGCGCCGCCCAACCTTTCGTTAAATGGGTTTGAAGTGATTGATGATGCTAAGTCTCAGCTCGAAGCTGCTTGTCCTGGCATTGTATCTTGTGCTGACATTCTTGCTCTTGCTGCCCGTGACTCTGTAGTTTTGACAAGTGGACTACGTTGGTCAGTGCCCACAGGACGAAGAGATGGCACAATTTCTTTGGCTTCAGAAGCTAACAACTTGCCTGGATTTACAGATTCAATTGACGTTCAAAAGCAAAAATTTAGCGACAAAGGTCTCAACACTCAAGATCTTGTCACTCTTGTGGGTGGACACACAATTGGCACAACACAATGCCAATTTTTCAACTACAGACTCTTCAACTTCACAAACAATGGACCAGATCCAAGCATGGACCCAGCGTTCGTGACTCAGATGCAAGCGCTGTGCCCTCAGAACGGCGACGGTAGCCGCAGGGTTGCATTGGACACAGGCAGCGCCGGGCGGTTCGACACCATGTTCTTCTCAAACTTGAGGAACGGACGTGGGGTTTTGGAGTCTGATCAAAAGCTATGGACCGACGCTTCCACTCGCACTTTTGTCCAACGCTTTCTGGGTTTGAGAGGCGTCTTGGGTTTGACCTTCAATCTTGAGTTTGGGAAATCTATGGTTAAGATGAGTAACATTGAAGTTAAGACTGGAACTCAAGGAGAAATTCGGAAAGTTTGTTCTGCAGTTAACTAA 1056 46.21 FPFPCKLHPKQTSTSFLNSLIPMTRLRFNSMLVLVVSVAVIFTFCSTLVHGQATRIGFYSNSCPQVESIIASTVRSHFQSDPRIAPGLLRMHFHDCFVRGCDASVLLAGSNSERTAPPNLSLNGFEVIDDAKSQLEAACPGIVSCADILALAARDSVVLTSGLRWSVPTGRRDGTISLASEANNLPGFTDSIDVQKQKFSDKGLNTQDLVTLVGGHTIGTTQCQFFNYRLFNFTNNGPDPSMDPAFVTQMQALCPQNGDGSRRVALDTGSAGRFDTMFFSNLRNGRGVLESDQKLWTDASTRTFVQRFLGLRGVLGLTFNLEFGKSMVKMSNIEVKTGTQGEIRKVCSAVN 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 29203688 29205755 + ClCG09G015280.1 Cla09g01499 280919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01499 351 Pfam Peroxidase 71 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 208 218 IPR019793 -
Cla09g01499 351 Gene3D - 58 351 - -
Cla09g01499 351 ProSiteProfiles Plant heme peroxidase family profile. 53 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 ProSitePatterns Peroxidases active site signature. 85 96 IPR019794 GO:0004601
Cla09g01499 351 PRINTS Plant peroxidase signature 87 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Plant peroxidase signature 142 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Plant peroxidase signature 123 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Plant peroxidase signature 281 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Plant peroxidase signature 63 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Plant peroxidase signature 325 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Plant peroxidase signature 161 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Plant peroxidase signature 265 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Plant peroxidase signature 207 219 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 CDD secretory_peroxidase 55 350 IPR033905 GO:0004601|GO:0042744
Cla09g01499 351 PRINTS Haem peroxidase superfamily signature 208 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Haem peroxidase superfamily signature 267 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Haem peroxidase superfamily signature 143 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Haem peroxidase superfamily signature 85 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PRINTS Haem peroxidase superfamily signature 161 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 PANTHER PEROXIDASE 32 349 - -
Cla09g01499 351 PANTHER PEROXIDASE 25-RELATED 32 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01499 351 Gene3D Peroxidase, domain 2 186 330 - -
Cla09g01499 351 SUPERFAMILY Heme-dependent peroxidases 55 351 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01201 Cla-Chr1:21939803 Cla09g01499 Cla-Chr9:29203688 1.59E-80 dispersed
Cla06g01108 Cla-Chr6:23823089 Cla09g01499 Cla-Chr9:29203688 1.45E-137 dispersed
Cla06g01110 Cla-Chr6:23844443 Cla09g01499 Cla-Chr9:29203688 6.14E-135 dispersed
Cla09g01455 Cla-Chr9:27773951 Cla09g01499 Cla-Chr9:29203688 3.17E-92 dispersed
Cla09g01499 Cla-Chr9:29203688 Cla02g00175 Cla-Chr2:1795194 1.81E-39 dispersed
Cla09g01499 Cla-Chr9:29203688 Cla09g01501 Cla-Chr9:29238210 2.06E-155 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01499 K00430 - csv:101217567 574.318