Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g01595 | ATGGTGAGGAAGTTGAATGTTCTGAGGCCTCAGATCTTTGCTCTCGGAAATTCTCGTTTCTCCACTTTTGCTCAACCGTCTTCCAAGCCTCATCCTCCGAGGGTTCCAAATCTCATAGGAGGGACTTTTGTGGATTCTCAATCCTCGGCATTCATAGATGTCATAAACCCAGCAACACAAGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGATGAATTTAAAGCTGCAGTGTCTGCAGCAAAGCAGGCTTTTCCTGCATGGCATAATACTCCAGTTACAACTCGTCAACGAATTATGTTCAAGCTTCAAGAACTTATTAGGCGAGATATAGACAAACTTGCTCTGAATATTACCACAGAACAAGGAAAAACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCGAATGTGTCACATGGAATTGATACCTACAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCGTTCAATTTTCCAGCCATGATCCCCCTATGGGTTAGCCTACTGACACTTCCTTGGGATAATCCTCTGCAGATGTTCCCAATTGCTGTTACATGTGGGAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCAGGGGCTTCTATAATCCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTGGTTCATGGTACTAATGATGTTGTTAATGCCATTTGTGATGATGAAGATATAAAAGCAATATCATTTGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGATCAGCTAAAGGAAAACGTGTGCAGGCAAGTAAACCAGGCACAAATTTAAGGTTACTTTTAGAATCCAATATGGGTGCAAAAAATCATGCAATTGTCTTGCCCGATGCCAGCATAGATGCTACTTTGAATGCTTTGGTTGCTGCAGGTTTTGGTGCTGCTGGACAAAGGGAGGATAAACTTGTAGAACGTGCCAAAACTCTGAAGGTAAACTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGATAGGATTCACAGATTGGTTCAATCTGGCATCGATAGTGGAGCCAGGCTACTGCTAGATGGGAGAAATATAGTGGTTCCTGGATACGAGAGTGGAAATTTTATTGGCCCTACTATCTTAACAGATGTGACGCCGGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGAGAGTTTAGAGGAGGCCATTAGCATCGTTAACGGAAATAGGTACGGGAATGGAGCTTCCATATTCACAACATCTGGGATAGCGGCGAGGAAGTTTCAAACGGATATTGAAGCCGGACAGGTTGGGATCAATGTTCCAATTCCGGTTCCCTTGCCCTTCTTCTCGTTCACCGGCTCCAAGGCATCTTTTGCTGGGGATCTCAATTTTTATGGCAAGGCTGGGGTCAACTTCTTCACACAGATCAAAACAGTGACACAACAATGGAAAGACTCAGCTGGGGGAACTGCAGTCAACCTTGCAATGCCAACCTCTTTGAAGTCATAG | 1623 | 44.24 | MVRKLNVLRPQIFALGNSRFSTFAQPSSKPHPPRVPNLIGGTFVDSQSSAFIDVINPATQEVVSQVPLTTNDEFKAAVSAAKQAFPAWHNTPVTTRQRIMFKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWVSLLTLPWDNPLQMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQASKPGTNLRLLLESNMGAKNHAIVLPDASIDATLNALVAAGFGAAGQREDKLVERAKTLKVNSGTEPDADLGPVISKQAKDRIHRLVQSGIDSGARLLLDGRNIVVPGYESGNFIGPTILTDVTPDMECYKEEIFGPVLLCMQAESLEEAISIVNGNRYGNGASIFTTSGIAARKFQTDIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSAGGTAVNLAMPTSLKS | 540 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 31974256 | 31983302 | - | ClCG09G016250.2 | Cla09g01595 | 281015 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g01595 | 540 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 487 | 517 | IPR016162 | GO:0016491 | |
Cla09g01595 | 540 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 27 | 338 | IPR016162 | GO:0016491 | |
Cla09g01595 | 540 | PANTHER | MALONATE-SEMIALDEHYDE DEHYDROGENASE | 7 | 537 | IPR010061 | GO:0004491 | |
Cla09g01595 | 540 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 339 | 486 | IPR016163 | GO:0016620 | |
Cla09g01595 | 540 | PANTHER | METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE | 7 | 537 | - | - | |
Cla09g01595 | 540 | SUPERFAMILY | ALDH-like | 28 | 522 | IPR016161 | GO:0016491 | |
Cla09g01595 | 540 | CDD | ALDH_F6_MMSDH | 35 | 521 | IPR010061 | GO:0004491 | |
Cla09g01595 | 540 | Pfam | Aldehyde dehydrogenase family | 43 | 337 | IPR015590 | GO:0016491 | |
Cla09g01595 | 540 | Pfam | Aldehyde dehydrogenase family | 339 | 517 | IPR015590 | GO:0016491 | |
Cla09g01595 | 540 | TIGRFAM | MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) | 37 | 521 | IPR010061 | GO:0004491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01786 | Cla-Chr1:32802509 | Cla09g01595 | Cla-Chr9:31974256 | 0 | dispersed | |
Cla06g01654 | Cla-Chr6:30056618 | Cla09g01595 | Cla-Chr9:31974256 | 1.91E-46 | dispersed | |
Cla09g01595 | Cla-Chr9:31974256 | Cla02g01637 | Cla-Chr2:31170876 | 1.50E-36 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g01595 | K00140 | - | csv:101204924 | 946.806 |