Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01595 ATGGTGAGGAAGTTGAATGTTCTGAGGCCTCAGATCTTTGCTCTCGGAAATTCTCGTTTCTCCACTTTTGCTCAACCGTCTTCCAAGCCTCATCCTCCGAGGGTTCCAAATCTCATAGGAGGGACTTTTGTGGATTCTCAATCCTCGGCATTCATAGATGTCATAAACCCAGCAACACAAGAAGTTGTTTCTCAAGTTCCATTGACCACAAATGATGAATTTAAAGCTGCAGTGTCTGCAGCAAAGCAGGCTTTTCCTGCATGGCATAATACTCCAGTTACAACTCGTCAACGAATTATGTTCAAGCTTCAAGAACTTATTAGGCGAGATATAGACAAACTTGCTCTGAATATTACCACAGAACAAGGAAAAACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCGAATGTGTCACATGGAATTGATACCTACAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCGTTCAATTTTCCAGCCATGATCCCCCTATGGGTTAGCCTACTGACACTTCCTTGGGATAATCCTCTGCAGATGTTCCCAATTGCTGTTACATGTGGGAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCAGGGGCTTCTATAATCCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTGGTTCATGGTACTAATGATGTTGTTAATGCCATTTGTGATGATGAAGATATAAAAGCAATATCATTTGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGATCAGCTAAAGGAAAACGTGTGCAGGCAAGTAAACCAGGCACAAATTTAAGGTTACTTTTAGAATCCAATATGGGTGCAAAAAATCATGCAATTGTCTTGCCCGATGCCAGCATAGATGCTACTTTGAATGCTTTGGTTGCTGCAGGTTTTGGTGCTGCTGGACAAAGGGAGGATAAACTTGTAGAACGTGCCAAAACTCTGAAGGTAAACTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGATAGGATTCACAGATTGGTTCAATCTGGCATCGATAGTGGAGCCAGGCTACTGCTAGATGGGAGAAATATAGTGGTTCCTGGATACGAGAGTGGAAATTTTATTGGCCCTACTATCTTAACAGATGTGACGCCGGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGAGAGTTTAGAGGAGGCCATTAGCATCGTTAACGGAAATAGGTACGGGAATGGAGCTTCCATATTCACAACATCTGGGATAGCGGCGAGGAAGTTTCAAACGGATATTGAAGCCGGACAGGTTGGGATCAATGTTCCAATTCCGGTTCCCTTGCCCTTCTTCTCGTTCACCGGCTCCAAGGCATCTTTTGCTGGGGATCTCAATTTTTATGGCAAGGCTGGGGTCAACTTCTTCACACAGATCAAAACAGTGACACAACAATGGAAAGACTCAGCTGGGGGAACTGCAGTCAACCTTGCAATGCCAACCTCTTTGAAGTCATAG 1623 44.24 MVRKLNVLRPQIFALGNSRFSTFAQPSSKPHPPRVPNLIGGTFVDSQSSAFIDVINPATQEVVSQVPLTTNDEFKAAVSAAKQAFPAWHNTPVTTRQRIMFKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWVSLLTLPWDNPLQMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQASKPGTNLRLLLESNMGAKNHAIVLPDASIDATLNALVAAGFGAAGQREDKLVERAKTLKVNSGTEPDADLGPVISKQAKDRIHRLVQSGIDSGARLLLDGRNIVVPGYESGNFIGPTILTDVTPDMECYKEEIFGPVLLCMQAESLEEAISIVNGNRYGNGASIFTTSGIAARKFQTDIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSAGGTAVNLAMPTSLKS 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 31974256 31983302 - ClCG09G016250.2 Cla09g01595 281015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01595 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 487 517 IPR016162 GO:0016491
Cla09g01595 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 338 IPR016162 GO:0016491
Cla09g01595 540 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 7 537 IPR010061 GO:0004491
Cla09g01595 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 339 486 IPR016163 GO:0016620
Cla09g01595 540 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 7 537 - -
Cla09g01595 540 SUPERFAMILY ALDH-like 28 522 IPR016161 GO:0016491
Cla09g01595 540 CDD ALDH_F6_MMSDH 35 521 IPR010061 GO:0004491
Cla09g01595 540 Pfam Aldehyde dehydrogenase family 43 337 IPR015590 GO:0016491
Cla09g01595 540 Pfam Aldehyde dehydrogenase family 339 517 IPR015590 GO:0016491
Cla09g01595 540 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 37 521 IPR010061 GO:0004491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01786 Cla-Chr1:32802509 Cla09g01595 Cla-Chr9:31974256 0 dispersed
Cla06g01654 Cla-Chr6:30056618 Cla09g01595 Cla-Chr9:31974256 1.91E-46 dispersed
Cla09g01595 Cla-Chr9:31974256 Cla02g01637 Cla-Chr2:31170876 1.50E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01595 K00140 - csv:101204924 946.806