Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01596 ATGCCAATTCTATTAACAGGGGGATGCCACATACAAAAACATTTAAATATGACCAACAGAACAATGGGAAATCGAAATACCTACCACAGTAATTCACGACCCAAACTACTTGGAGATGCCTTGGTGAAGGCAACTGAAACGAGTGGAGAGAAGAAGAAGAAGAAAGAAAAAGTAGATTCCACAATGGTCGAAGTTAACGAAAATGTTGAATGTCGCTTCTGGTGTTCTCAGGACGCCATGGATAAGCCCGGTTGGTGGCTCTCCACCAATTTCTCCTTCTCTTCTTTCCCCGATTCCTCCAATATCACTCTCGTCAACAGTGCTTCAAGAGGTACGGTTTTCGATCATCCTTCTCTCCGGCTAACCGACAACCAGATCGGCGGCAGCGTCTTCAACACCACTGGAAGAGCCTACTTTTCGGAGCCGATTCAACTATGGGATCCAATTACGAACATATCCGCAGATTTCACCACTTATTTTGAGTTCGTGATCTTTCCTAACGGGATGTCGAACGCCTCCGCTGGTGGAATCGCCTTCTTCGTAGCTTCCGAGGATTCCGCATCCCCTCCTTTGAATTCCAGCGGCGGATGGCTAGGGTTGTTCAATCAATCGAATGACGGAAATTCGTCGAATCAGATCGTCGCCGTCGAGTTCGATATCTTTAAAGATCCGTGGGATTCTAGCGATAATCATGTTGGTGTTGACGTGAATTCCATCGTATCCGTCGCTAAGCGTACTTGGAGTACTACAATGGTCTCTGGAGATATCTTGGGTGCTCGAATCACTTACAATGGCACATTGAGGAGATTGGATGTTACGCTGAAAGATCCTCAGGTTCCAAATGAGTCAGTTACGTTGAATCTTACTGATGTTTCCATTGATTTGAAGGAAATTCTTCCGGCGAGAGTGATCGTTGGCTTTTCTGCATCAACAGGTCAGTCGATCCCAATTCAAGCAATTAGGAGTTGGAATTTCACTTCGAGTTTAGATCTGATTGTTGTAACTGAAAATGTTGAGAAATCCAAATTGTGGATTGTCGGGCTGGTTATTGGATTGGTTGGCTTGATATCTCTGACTGGTTTGTTATATGGTGTTTGGTGGAGAACAACAAAGAGGAAACAGAGAGAAAAAGAAGAGAGAAATGGTGATGATGATGATGATTTTAATGATGAAGAAATTGGTATGGTAGAGAATGTTGTTGATGAAGAGTTTATTAAAGGAACAGGACCAAAAAGATTTTCTTATAAGGAACTGGTTAAAGCAACCAACAACTTTTCTGAAGAAGGAAAGCTTGGACAAGGAGGTTTTGGTGGTGTTTACAAAGGCTTTGTGACAGAACTAAACATGGAAATAGCAGCAAAGAAGATATCAAGCAATTCCAAGCAGGGCAAAAAAGAGTACATCTCTGAAGTGAACATTATAAGCCGCTTGCGACATCGGAATCTTGTTCAACTCGTTGGATACAGCCACGAACGCGGCCATTTCTTGCTCGTTTATGAGTACATGCCGAATGGTAGCTTAGATTCCCATTTGTTTGGGAAGAAACCGCGCCTCTCCTGGCCTGTAAGATACAAAATAGCCCATGGCATAGCCTCCGCCTTGCTCTACCTCCACGAGGAGTGGGAGCAATGCGTTGTCCACAGAGATATCAAATCAAGCAATGTGATGTTAGACTCAAACTTCAACGCAAAAGTCGGCGATTTCGGTCTAGCTAGGCTTGTTGACCATGGTCTCCGCTCGCCCACTACAGTCGTGGCTGGCACGATGGGCTACCTAGCTCCAGAGTCCCTCCTCACAAGCAAGGCGAGCAAGGAATCAGACTTGTTTAGTTTCGGAGTGGTGGCATTGGAGATAGCTTGTGGGAGAAAAGCAGTTGAGCACCATGAAGAAGAAGAAGAAAAGATCAGTTTGGTGAGTTGGGTTTGGGGGTTGTATGGACAAGGAAGGCTTTTAGAGGCAGTTGATAAGGCGTTGAATGGAGAGTTCAATCAAGAAGAAATGGTGTGTTTAATGACTGTAGGGCTTTGGTGTGCGCACCCAAATCATAACCTTAGAGCTTCAATAAGGCAAGCCATTCAAGTGCTGAACTTTGAGGCCCCTTTGCCTAAACTCCCAACACAAATGCCTGTACCTATGTTCTATGCTCCCACAACTGCCAATGAGAACCCTTTTTCCTATACTTACTCAACCAACACAAACTCTCAAGTATCATTGTAA 2217 44.43 MPILLTGGCHIQKHLNMTNRTMGNRNTYHSNSRPKLLGDALVKATETSGEKKKKKEKVDSTMVEVNENVECRFWCSQDAMDKPGWWLSTNFSFSSFPDSSNITLVNSASRGTVFDHPSLRLTDNQIGGSVFNTTGRAYFSEPIQLWDPITNISADFTTYFEFVIFPNGMSNASAGGIAFFVASEDSASPPLNSSGGWLGLFNQSNDGNSSNQIVAVEFDIFKDPWDSSDNHVGVDVNSIVSVAKRTWSTTMVSGDILGARITYNGTLRRLDVTLKDPQVPNESVTLNLTDVSIDLKEILPARVIVGFSASTGQSIPIQAIRSWNFTSSLDLIVVTENVEKSKLWIVGLVIGLVGLISLTGLLYGVWWRTTKRKQREKEERNGDDDDDFNDEEIGMVENVVDEEFIKGTGPKRFSYKELVKATNNFSEEGKLGQGGFGGVYKGFVTELNMEIAAKKISSNSKQGKKEYISEVNIISRLRHRNLVQLVGYSHERGHFLLVYEYMPNGSLDSHLFGKKPRLSWPVRYKIAHGIASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNAKVGDFGLARLVDHGLRSPTTVVAGTMGYLAPESLLTSKASKESDLFSFGVVALEIACGRKAVEHHEEEEEKISLVSWVWGLYGQGRLLEAVDKALNGEFNQEEMVCLMTVGLWCAHPNHNLRASIRQAIQVLNFEAPLPKLPTQMPVPMFYAPTTANENPFSYTYSTNTNSQVSL 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 31993165 31996539 - ClCG09G016260.2 Cla09g01596 281016

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01596 738 ProSiteProfiles Protein kinase domain profile. 425 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01596 738 Pfam Legume lectin domain 89 328 IPR001220 GO:0030246
Cla09g01596 738 SUPERFAMILY Concanavalin A-like lectins/glucanases 88 330 IPR013320 -
Cla09g01596 738 SUPERFAMILY Protein kinase-like (PK-like) 409 724 IPR011009 -
Cla09g01596 738 CDD lectin_legume_LecRK_Arcelin_ConA 101 329 IPR001220 GO:0030246
Cla09g01596 738 Pfam Protein kinase domain 426 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01596 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Cla09g01596 738 Gene3D Phosphorylase Kinase; domain 1 410 501 - -
Cla09g01596 738 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 88 734 - -
Cla09g01596 738 Gene3D - 87 346 - -
Cla09g01596 738 SMART serkin_6 425 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01596 738 PANTHER - 88 734 - -
Cla09g01596 738 Gene3D Transferase(Phosphotransferase) domain 1 502 717 - -
Cla09g01596 738 ProSitePatterns Protein kinases ATP-binding region signature. 431 455 IPR017441 GO:0005524
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01596 - - - csv:101205412 1125.54
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01596 Cla-Chr9:31993165 Cla10g00790 Cla-Chr10:15972157 0 dispersed
Cla09g01630 Cla-Chr9:32519118 Cla09g01596 Cla-Chr9:31993165 1.98E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g905 . Blo03g00035 Bda06g01133 . . . . . Cmo19g00508 Cmo11g01451 . . . . . Cpe04g00360 Cpe15g00386 Bhi05g00956 . . . . . . . . . . . . . . . . . Lsi03g00681 Csa07g00619 . Cme01g00179 . . . . . . . . . . . Cma11g01676 Cma19g00490 Car11g01167 Car19g00367 . . . . . . . . . Cla09g01596 . . . . . . . . Chy01g00189 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000150 2 7 3 2 2 5 6 4 4 9 8 5 7 10 9 7 6 7 5 4 9 4 4 5 5 9 3 2 3 2 158
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80814 PF00069 Pkinase 4.20E-48 CL0016 Cla PK