Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01628 ATGTCTCCAATGGAGGTCTCAATTCTCACCTCTCCAAACCTTTTCCTACTCATCTTCTTCTACTATAACTTCTTGTGGAGCCTAACCAACCTAGGTTCAGTCTCAGCCACCATTTCTTATGAGAACTTAACATTCAGCCTCATTGATTTCGACCCAAACGGCCACGACATTCTTTACGAAGGAGATGCATACCCTTCCAACAATGTCATTCAGCTTACCATGAACCAGAGAGACATGCGTCCCAATGGAAGCGTTGGTCGTGCAACCTACAAAGATCCTCTCCATCTTTGGGAGAGTGGCCACAGGAATCTTGCAGACTTCACCACCCAATTCTCCTTCACAATTGACTCACAGCACAGTCGCACTTACGGCGACGGTTTTGCCTTCTTCATCGCCCCAATGGACTCGAGGCTTCCACCCTACTCAGGAGGTGGCAACTTCGGTCTCTTGAGTTCCAACAAGAGTGATCCAGATGTAGTCTCGACAGCTAACTTTGTTGCTGTCGAGTTTGACACCTACACAAATGCATGGGACCAGTCAGGGAATCACATCGGCGTTGATGTCGGCTCTGTTAAATCTCTCAGCTCTACTTCATGGTGGTGGAGTGACATAGAAAATGGTGGAAAAGTTCGAGCAGTGATGAGTTACAATTCACGCTCCCACAATTTGACTGTTTACTTAGTTGATGAAAGAGATTCAGAAGTTTCTCCGACGAACTCTTCCAGCTTCACTTTCAATATTGATTTGAGAGAGCATTTACCAGAATGGGTGATGATTGGCTTTTCAGGATCAACCGGATCTTTCTTCGAGATTCAGAAAATTAGCTCGTGGAATTTCAGCTCTAGATTACAAGTTGAAGTCAATGTTACCAACACAACTGATCCAGCTAGCTCTCCTATTAACTCCAAGAAAGGAATCAACATGAAATGGTTTGTGATGATCTTCGCCATGGCCCTTTCACTCCTAATATTGGGGTGTTCTTGGTTTTGGATATGGATGAAGAGAAGTAGCAGCAGAAAAAGTGACAGAAGGAACCAAGAGGAAGATTTCGAGAACGAAACAGGGCCAAGGAAGATTTCATATAAAGACCTATTAGCAGCAACCAACAAGTTCAGTGATAAAAATGTGTTGGGACAAGGAGGGTTTGGCAAAGTATACAGAGGGTTTCTAGACAACAAGGAACTTGATGTGGCAGTGAAGAGAATCACCCCAAACAACCTCCATCAAGGGTCAAGAGAGTTTGCATCAGAAGTGAAAACAATCAGCAAATTAAGACACAAGAACTTAGTAGAGCTAATTGGGTGGTGCTGCACCAAACACCAAGAATATCTCATAGTCTACAAATTCATGCCTAACAAAAGCTTAGACTTCCACCTCTTTCAACAAAACAACCTCCTAACATGGGATCACAGATACAAAATCACAATAGGTTTGGCCTCAGCACTACACTATCTACAAGAAGAACAAGATCCATACATACTACACAGAGACATAAAATCAAGCAACATCCTATTAGACGGCGAATTCAACGCCAAACTCGGCGATTTCGGGCTCGCTAAGCTTGTCGATCATGGAAAACAATCAATAACCACCATACTACGAGGAACAGAAGGTTATGTCGCACCAGAGTACCTGGAAAGCAGCGTGGCAAGTAAAGAATCCGACATCTACAGCTTCGGAATCGTGTGCTTGGAAATCGCCTGCGGAAAACAAGCCCTAGGTGAAGCCAGAGAAGACGGAAAGAAATGTTTGATAAAACTGGTAGAATGGGTTTGGGATTATTACCGAAGAAGGAGTGTGATTGAGGCTGCCGACCCGAAATTGCGGCAAAATTTCAAAAGAGAAGAGATGAACCAACTGTTGATCATAGGACTTGCCTGTGCTCAGCCGGATTTCTCTCTACGGCCTTCCATCAAACAGGTAATCGACATGCTTATCTTCACATCGCCATTGCCGAATCTGCCATTGGAATATCCAGGATTATCGAGATCTGCAGTGTTTTTGAGTGCGGAAATGGAATCATTACGAACGTCGTCGTGTTTACAGAGCGGGAATCTTCATGGCAAAAGCATTTCTTCTAAGAATTCCACTGCTTCTTCTACTTTTTCGAATTTGGGCTAA 2121 43.85 MSPMEVSILTSPNLFLLIFFYYNFLWSLTNLGSVSATISYENLTFSLIDFDPNGHDILYEGDAYPSNNVIQLTMNQRDMRPNGSVGRATYKDPLHLWESGHRNLADFTTQFSFTIDSQHSRTYGDGFAFFIAPMDSRLPPYSGGGNFGLLSSNKSDPDVVSTANFVAVEFDTYTNAWDQSGNHIGVDVGSVKSLSSTSWWWSDIENGGKVRAVMSYNSRSHNLTVYLVDERDSEVSPTNSSSFTFNIDLREHLPEWVMIGFSGSTGSFFEIQKISSWNFSSRLQVEVNVTNTTDPASSPINSKKGINMKWFVMIFAMALSLLILGCSWFWIWMKRSSSRKSDRRNQEEDFENETGPRKISYKDLLAATNKFSDKNVLGQGGFGKVYRGFLDNKELDVAVKRITPNNLHQGSREFASEVKTISKLRHKNLVELIGWCCTKHQEYLIVYKFMPNKSLDFHLFQQNNLLTWDHRYKITIGLASALHYLQEEQDPYILHRDIKSSNILLDGEFNAKLGDFGLAKLVDHGKQSITTILRGTEGYVAPEYLESSVASKESDIYSFGIVCLEIACGKQALGEAREDGKKCLIKLVEWVWDYYRRRSVIEAADPKLRQNFKREEMNQLLIIGLACAQPDFSLRPSIKQVIDMLIFTSPLPNLPLEYPGLSRSAVFLSAEMESLRTSSCLQSGNLHGKSISSKNSTASSTFSNLG 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 32497667 32499787 - ClCG09G016600.1 Cla09g01628 281048

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01628 706 SUPERFAMILY Protein kinase-like (PK-like) 345 649 IPR011009 -
Cla09g01628 706 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 284 IPR013320 -
Cla09g01628 706 PANTHER - 56 661 - -
Cla09g01628 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Cla09g01628 706 ProSitePatterns Legume lectins alpha-chain signature. 253 262 IPR000985 -
Cla09g01628 706 Gene3D - 40 294 - -
Cla09g01628 706 SMART serkin_6 371 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01628 706 ProSitePatterns Protein kinases ATP-binding region signature. 377 400 IPR017441 GO:0005524
Cla09g01628 706 CDD lectin_legume_LecRK_Arcelin_ConA 43 283 IPR001220 GO:0030246
Cla09g01628 706 Gene3D Transferase(Phosphotransferase) domain 1 450 655 - -
Cla09g01628 706 CDD STKc_IRAK 377 645 - -
Cla09g01628 706 ProSiteProfiles Protein kinase domain profile. 371 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01628 706 Pfam Protein kinase domain 372 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01628 706 Gene3D Phosphorylase Kinase; domain 1 332 449 - -
Cla09g01628 706 Pfam Legume lectin domain 43 287 IPR001220 GO:0030246
Cla09g01628 706 ProSitePatterns Legume lectins beta-chain signature. 166 172 IPR019825 -
Cla09g01628 706 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 56 661 - -
Cla09g01628 706 MobiDBLite consensus disorder prediction 687 706 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01628 - - - csv:101209022 1237.63
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01628 Cla-Chr9:32497667 Cla10g00790 Cla-Chr10:15972157 1.97E-172 dispersed
Cla09g01628 Cla-Chr9:32497667 Cla09g01632 Cla-Chr9:32521804 1.94E-14 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g837 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi10g00268 . . . . . . . . . . . . . . . . . . . . Bhi10g01644 . . . . . . Cla09g01628 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013790 0 1 0 0 0 1 1 1 1 1 1 1 1 0 0 1 1 0 1 1 1 2 1 0 0 1 1 0 1 0 20
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80815 PF00069 Pkinase 1.90E-45 CL0016 Cla PK