Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01633 ATGGCTGCCCCAATCCCCATTTTCATTTTTCTTCTTCCTCTGGTATTCTTCATCAACATCTTGTCATTCTTCTCTGCACTTACACTTTCAAGTTCTTTATCTTTCAACTTCACCTCTTTCGATTCAAGTAATACCCACATCTTCTACGAGAGAGCATTCCCATCAAATCGAACAATCAAACTCACAGGAGAAAGGGTTAATAGTAACCAAAATTTCTCTGGACGAGCAACTTACTTCAAGCCCTTGCATCTTTGGGACAAAGCCTCTGGGAATCTTTCAAGTTTCCGAACTCATTTCTCCTTCGCCATTGATTCAGAAGGAGCAGAAAGGTACGGAGATGGGCTTACATTCTTCTTTGCTCCTAATAATTCTAGGCTTGATGATGAGATCTCAAAGGGCAGTGGATTGGGGATTGGGTTTAACCCCAGTTTGACAAATTTAACATATAGTTCCTTTTTTGCAGTTGAGTTTGATATCTTTAGCAATTACTTTGATCCACCTGAAAAACTAGAACATGTAGGTATTGATATCAATTCAATGGCTTCTGTTGCTTATTCAGTATGGAAATGTGATATTAGGAGAGGGAAGAGAACTGATGTTTGGATTAATTATGATTCTGTTACTTTGAATTTGAGTGTTACTTTCACTGGGTATGATGAGAATAATAAAACTATATTGCAGAAACTTAACCATGATGTAAACTTTAGGTTGACTCTACCTGAATGGGTTACTTTTGGTTTTTCTGCTGCAACTGGAAGTTTATATGCAACTCACAACATATATTCTTGGGATTTTGAGTCAACTCTCAATTTGGCCTCTGATTCTAATTTGCCCTCAAGTCCTGGTAAGGGTAGCAAGGTAGGTCTAGTAGTTGGAGTGGGTGTTGGTGTTGGTGTATTGTTCTTAGGGGGTGGTTTGGTTATAGTTTGGATCTTTTTTTGGAAGAAGAGAAAGAAGAAGATGATGAAAATGAATATGGAAGAGGATATGGTGTTGGATGATAGTGAGTTTGAAAAGGGTAAAGGACCTCAGAAGTTTACGTATAGCGAATTAGCTCAAGCGACGAATAACTTTTGGGAGGGTGAGAAGCTTGGTGAAGGAGGATTTGGTGGTGTCTATAGAGGTTTCTTAAGGGACTTAAATTGCTATGTCGCTGTGAAGAAAGTATCAAAAGGGTCTAGACAAGGACTAAAAGAGTATGCATCTGAGGTGAAAATCATTAGCCAATTGAGACATAGAAACTTAGTGCAACTCTTGGGTTGGTGTCATGAAAGAGGTGAGCTTTTGCTGGTTTATGAATTCATGTCAAATGGAAGCTTAGATGCCCATCTTTTCAAAGAAAACAACTTCTTAACATGGGAATTTCGATACAAAGTTGCTCGAGGTATTGCCTCGGCTCTGCTATATCTACATGAAGAGTGGGAAAAATGTGTGCTGCATCGAGATATAAAGTCGAGCAATGTAATGTTGGATTCAGATTTCAATGCAAAGCTTGGAGATTTTGGGTTGGCTAGGCTAGTAGACCATGCCATAGGTTCACAAACAACAGTTCTTGCTGGAACAATGGGCTACTTGGCTCCTGAATGTGCTACAACAGGAAGAGCCAGTAAGGAATCAGATGTATTCAGCTTTGGGATTGTGGCTTTGGAAATTGCTTGTGGAAGAAGACCCTTTAATCCCAATGTAGAGGAAGACAAAATGGTGATGGTAGAGTGGGTTTGGAAACTTTATGGCCATGGAAGACTTCTTGAAGCAGCCGACTCGAAACTCCATGGAAGCTTGGAGGATGAACCGCAGCAGCAACAACAGATTGAGTGTTTGATGGTTGTTGGTCTGTGGTGTGCTCATCCAGATATAAATTGCAGACCATCAATAAGACAAGCAATTCATGTGCTGAACTTTGAAGCCCCATTACCTGTTCTTCCTTTACAGTTCCCTACGCTTGCTTATCATCCTCTTTCAGTGAATAGATCAACTATTTCTTCTTCATTTTCATCTACTCAAGATAGTGTTGTTTCTCAAACTGGTAAAGGCTTCAACTCTACTAATGTCTTAACTAGTTCTTCACAGGAGACTACATCTTCTTCAACTTCTTTTTCTGCATCAACTTCACTTTTGAATACACGGTAA 2130 39.58 MAAPIPIFIFLLPLVFFINILSFFSALTLSSSLSFNFTSFDSSNTHIFYERAFPSNRTIKLTGERVNSNQNFSGRATYFKPLHLWDKASGNLSSFRTHFSFAIDSEGAERYGDGLTFFFAPNNSRLDDEISKGSGLGIGFNPSLTNLTYSSFFAVEFDIFSNYFDPPEKLEHVGIDINSMASVAYSVWKCDIRRGKRTDVWINYDSVTLNLSVTFTGYDENNKTILQKLNHDVNFRLTLPEWVTFGFSAATGSLYATHNIYSWDFESTLNLASDSNLPSSPGKGSKVGLVVGVGVGVGVLFLGGGLVIVWIFFWKKRKKKMMKMNMEEDMVLDDSEFEKGKGPQKFTYSELAQATNNFWEGEKLGEGGFGGVYRGFLRDLNCYVAVKKVSKGSRQGLKEYASEVKIISQLRHRNLVQLLGWCHERGELLLVYEFMSNGSLDAHLFKENNFLTWEFRYKVARGIASALLYLHEEWEKCVLHRDIKSSNVMLDSDFNAKLGDFGLARLVDHAIGSQTTVLAGTMGYLAPECATTGRASKESDVFSFGIVALEIACGRRPFNPNVEEDKMVMVEWVWKLYGHGRLLEAADSKLHGSLEDEPQQQQQIECLMVVGLWCAHPDINCRPSIRQAIHVLNFEAPLPVLPLQFPTLAYHPLSVNRSTISSSFSSTQDSVVSQTGKGFNSTNVLTSSSQETTSSSTSFSASTSLLNTR 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 32526836 32528965 + ClCG09G016650.1 Cla09g01633 281053

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01633 709 MobiDBLite consensus disorder prediction 683 709 - -
Cla09g01633 709 Pfam Legume lectin domain 32 278 IPR001220 GO:0030246
Cla09g01633 709 ProSitePatterns Protein kinases ATP-binding region signature. 364 388 IPR017441 GO:0005524
Cla09g01633 709 CDD STKc_IRAK 364 633 - -
Cla09g01633 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Cla09g01633 709 Gene3D - 30 277 - -
Cla09g01633 709 Gene3D Phosphorylase Kinase; domain 1 343 434 - -
Cla09g01633 709 Pfam Protein kinase domain 360 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01633 709 CDD lectin_legume_LecRK_Arcelin_ConA 35 269 IPR001220 GO:0030246
Cla09g01633 709 ProSitePatterns Legume lectins alpha-chain signature. 239 248 IPR000985 -
Cla09g01633 709 ProSiteProfiles Protein kinase domain profile. 358 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01633 709 PANTHER - 22 690 - -
Cla09g01633 709 SMART serkin_6 358 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01633 709 Gene3D Transferase(Phosphotransferase) domain 1 435 649 - -
Cla09g01633 709 SUPERFAMILY Protein kinase-like (PK-like) 343 670 IPR011009 -
Cla09g01633 709 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 273 IPR013320 -
Cla09g01633 709 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 22 690 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01633 - - - csv:101208539 1123.61
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01633 Cla-Chr9:32526836 Cla10g00790 Cla-Chr10:15972157 0 dispersed
Cla09g01630 Cla-Chr9:32519118 Cla09g01633 Cla-Chr9:32526836 3.78E-23 proximal
Cla09g01631 Cla-Chr9:32521307 Cla09g01633 Cla-Chr9:32526836 6.47E-54 proximal
Cla09g01632 Cla-Chr9:32521804 Cla09g01633 Cla-Chr9:32526836 6.87E-32 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g835 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi10g00270 . . . . . . . . . . . . . . . . . . . . Bhi10g01653 . . . . . . Cla09g01633 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000150 2 7 3 2 2 5 6 4 4 9 8 5 7 10 9 7 6 7 5 4 9 4 4 5 5 9 3 2 3 2 158
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80817 PF00069 Pkinase 1.70E-49 CL0016 Cla PK