Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01650 ATGGACATATGGTTACTCCTCGTCATCGTCTCCCTCTCCATTTATTTCCTCATAATCACCATTTTTAACAAATTCCAAAGCTCCACAAAGCTCCCGCCAGGTCCTCCTTCAATCCCCATTCTCACCAGTTTCCTATGGCTTCGAAGATCCCCACTCCAAATGGAGTCTCTGTTGCGCAGTTTCATCGCCAAATATGGCCCCATCCTCACCCTCCCCACCGGCTCCAGCCCCGCCATCGTCATCGCCGACCGCTCTATCGCCCACAAAGCCCTCCTCAAAAACGCCGCTCTCTTCGCTGACCGCCCACCGGCCCTCGCCATGAGCAACATCATCTCCACCCACCATTACAACCTCTCCTCTGCTCCGTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTTACTTCCCAAATCCTCCATCCTTCCCGTGTCAAGTCCTACGCCCGTTCTCGCAAGTGGGTTTTGGACGTTCTTCTTAATCGCTTTCTCTCTCACTCTCGATCCGGAACTCCCGTGTGCGTTGTCGATCATTTTCAGTACGCTATGATCTATTTGTTGGTGAATATGTGCTTTGGGGATAAGTTTGACGAAACCCAGATCAAGGAAATTGAGAACGTGGAGCGTGAGTTGCTAGTAAATCTTCAGCGTTTCATTGTCCTTAATTTTTGGCAAAAATTGACCAACATTTTGTTTCGAAATCGCAAACTGATGTTTTTGCAACTTAGAAGAAAGCAAGAGAAGGTATTAATGCCTCTAATCAATGCGAGAAGACAGGCCAAGCAAGAAAGAGAAAACAGAGAATACAGAGCAAAAAGGATTGAAACTGATGATGACGACGACGAAGAAGAAGAAGAAGAATTCGTGATATTATATGTTGATATGCTACTGGATTTGGAGTTGCCCGATGAGAAGAGAAAGCTTACTGATGACGAAATAGTCACTTTATGCTCCGAGTTTCTCAACGCCGGCACCGACACCACCTCCACAGCATTACAGTGGATTATGGCGAATTTAGTGAAATACCCAGAAATCCAAAACAAGCTTTTTGTTGAGATGAAAGGAGTAATGGGAGATGGATCAAGGGAGGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATATTTGAAAGCAGTGGTTTTAGAAGGATTAAGAAGGCATCCACCAGTGCATTTCGTGGTACCACACGCAGTGAAAGAAGATACAGAGTTAGAAAATTATGTGATACCAAGGAATGGGAGTGTACATTTCACGGTGGCGGAGATGGGTTGGGATTCAAAAGTATGGGAAGATCCGATGGAGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCGAAGAAGAAGAAATGGCGGGGTTTGATTTAACAGGGAGCAAAGAGATTAAGATGATGCCGTTCGGAGTAGGGAGGAGAATTTGCCCAGCGATTGGACTGGCAATGCTTCATTTGGAATATTTCATTGCAAATTTGGTATGGCGGTTTCAATGGAAGGCGGTGGATGGAGACGCCGTCGATCTTGCGGAGAAGATGGAGTTCACCGTCCTCATGAAAATGCCTCTCAAATTTCTGGTATCTATATGCTGTTGTCGTTTATCACTCTAA 1596 46.55 MDIWLLLVIVSLSIYFLIITIFNKFQSSTKLPPGPPSIPILTSFLWLRRSPLQMESLLRSFIAKYGPILTLPTGSSPAIVIADRSIAHKALLKNAALFADRPPALAMSNIISTHHYNLSSAPYGPLWRLLRRNLTSQILHPSRVKSYARSRKWVLDVLLNRFLSHSRSGTPVCVVDHFQYAMIYLLVNMCFGDKFDETQIKEIENVERELLVNLQRFIVLNFWQKLTNILFRNRKLMFLQLRRKQEKVLMPLINARRQAKQERENREYRAKRIETDDDDDEEEEEEFVILYVDMLLDLELPDEKRKLTDDEIVTLCSEFLNAGTDTTSTALQWIMANLVKYPEIQNKLFVEMKGVMGDGSREEVKEEDLGKLPYLKAVVLEGLRRHPPVHFVVPHAVKEDTELENYVIPRNGSVHFTVAEMGWDSKVWEDPMEFKPERFMKGGEEEEMAGFDLTGSKEIKMMPFGVGRRICPAIGLAMLHLEYFIANLVWRFQWKAVDGDAVDLAEKMEFTVLMKMPLKFLVSICCCRLSL 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 32967752 32969727 + ClCG09G016830.2 Cla09g01650 281070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01650 531 Pfam Cytochrome P450 32 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 PANTHER CYTOCHROME P450 6 522 - -
Cla09g01650 531 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 522 - -
Cla09g01650 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Cla09g01650 531 SUPERFAMILY Cytochrome P450 32 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01650 531 Gene3D Cytochrome P450 24 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00073 Cla-Chr1:606948 Cla09g01650 Cla-Chr9:32967752 0 dispersed
Cla09g01650 Cla-Chr9:32967752 Cla09g01652 Cla-Chr9:33028353 0 dispersed
Cla09g01650 Cla-Chr9:32967752 Cla09g01651 Cla-Chr9:33018725 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01650 K24184 - csv:101220777 737.643