Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01652 ATGGAGATTTGGTTCATCATCCTCATCTCTCTCTGCATCTGCTCTCTTCTCACCTCCATTTTTACCCATTTCCGAACCTCCACTAAGCTTCCACCAGGCCCTCCTTCGATTCCCATCATCACTAATCTCCTATGGCTCCGCAAATCCCCTCTCCAAATTGAATCTCTTCTCCGCAGTTTCGTTGCCAAATATGGCCCTATTCTCACCCTCCCCATCGGCAATCGCCCCGCCGTATTCATCGCCGACCGCTCTATTGCTCACAAAGCCTTACTCCAAAACGGTGCCCTCTTCGCCGACCGTCCACCGGCACCTCCCTTGAGCAAGGTCATCACTTCCAACCAGCACAACATCAGCTCCGCCTCTTACGGCCCACTCTGGCGTCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGTCTCAGATCCTACGCTCAAGCTCGCAAGTGGGTTTTGGATATTCTTTTCAATCGTCTTCAATCTCAGTCTGAATCTGAAAACCCCGTCTCAGTCATCCAGAATTTTCAGTACGCCATGTTTTGTTTGTTGGTGATTATGTGTTTTGGTGATAAGCTTGACGAATCCCAGATCCGCGAAGTCGAGAACGTGGAGCGAGCGCTTCTATTGAGTTTTGGGCGTTTCAACATTCTCAATTTCTGGCCTAAATTCACAAAGACTGTGCTTCGAAAACGATGGGAGGCGTTTCTCCAATTAAGAAGGAACCAACAAAAGGTTCTGATTCCTTTAATCGAAGCCCGAAGGAAGGCCAATCAAAACAGAGCAAACAGAGCTCAAACTGATGAAAAAGAAGAAGAAGAATTCGTGGTGTCATATGTTGATACGCTTCTCGAATTGGAGCTCCCCGACGAGAAGAGAAAGCTTACTAATGACGAATTGGTCACTTTATGCTCTGAATTCCTCAACGCCGGCACCGATACAACGTCCACGGCGCTGCAGTGGATAATGGCCAATTTAATGAAAAACCCAGAAATCCAGAACAAGCTTTTTGCAGAGATGAAAGGAGTAATAGGAGATGGATCAAGGGAGGAGGTGAAGGAAGAGGATTTGGACAAACTTCCATATTTGAAAGCGGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTCTTACCACACGCAGTGAAAGAAGAGACAATGTTGGAAAATTATGTGATACCAAAGGATGGGACAGTAAATTTCATGGTGGCAGAGATGGGTTGGGATCCAAAAGTGTGGGAAGATCCTATGGAGTTTAAGCCGGAGAGATTCATGAAAGGCGGCGAAGGAGAAGAAGAAGGAGGTGGGTTTGATATAACAGGGAGCAGAGAGATAAAGATGATGCCGTTCGGAGTAGGGAGAAGGATGTGTCCTGGATTTGGTGTGGCAATTCTTCATTTGGAGTATTTCATTGCGAATCTAATATGGAGATTTGAATGGAAAGCCGTAAAGGGAGAGGAAGTTAGTCTGTCGGAGAAGGTGGAGTTCACAGTGGTAATGGAAAAGCCTCTGAAGGCCAATATAAATCCCAGGTGA 1548 46.83 MEIWFIILISLCICSLLTSIFTHFRTSTKLPPGPPSIPIITNLLWLRKSPLQIESLLRSFVAKYGPILTLPIGNRPAVFIADRSIAHKALLQNGALFADRPPAPPLSKVITSNQHNISSASYGPLWRLLRRNLTSQILHPSRLRSYAQARKWVLDILFNRLQSQSESENPVSVIQNFQYAMFCLLVIMCFGDKLDESQIREVENVERALLLSFGRFNILNFWPKFTKTVLRKRWEAFLQLRRNQQKVLIPLIEARRKANQNRANRAQTDEKEEEEFVVSYVDTLLELELPDEKRKLTNDELVTLCSEFLNAGTDTTSTALQWIMANLMKNPEIQNKLFAEMKGVIGDGSREEVKEEDLDKLPYLKAVVLEGLRRHPPGHFVLPHAVKEETMLENYVIPKDGTVNFMVAEMGWDPKVWEDPMEFKPERFMKGGEGEEEGGGFDITGSREIKMMPFGVGRRMCPGFGVAILHLEYFIANLIWRFEWKAVKGEEVSLSEKVEFTVVMEKPLKANINPR 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 33028353 33029900 - ClCG09G016850.1 Cla09g01652 281072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01652 515 PANTHER CYTOCHROME P450 4 514 - -
Cla09g01652 515 SUPERFAMILY Cytochrome P450 31 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 514 - -
Cla09g01652 515 Pfam Cytochrome P450 31 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Cla09g01652 515 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla09g01652 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01650 Cla-Chr9:32967752 Cla09g01652 Cla-Chr9:33028353 0 dispersed
Cla09g01652 Cla-Chr9:33028353 Cla11g01516 Cla-Chr11:28807477 4.89E-58 dispersed
Cla09g01651 Cla-Chr9:33018725 Cla09g01652 Cla-Chr9:33028353 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01652 K24184 - csv:101220777 820.076