Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01671 ATGGCTACTTCCTTGTATGCATTGTCAAAGCAAAGTATGGTTGTTGTTGTTGTTCTACTACTCCATCTTTCCCTCTCAGTTGACTCCATTTCTTTCAAATCATACAATTCCATGCCCAACATTCAAAACTACATCTTTTTACGAGAAGACGTAGTTCATTCTCCAGGAGATATTCCACTTTACGATCCTCATTCCTACGACTTCTCTGTTTACCAAACCATTTACAAACACCCTCTCCAAATTTGGGACTCAACAACACAAAAACTCACTGATTTCTCAACCCATTTCACCTTCCAATTTGATTCCCTTCATGCAACAACATATTGTGGTGGCTGTGCTTTTTTCTTAGCCCCAATTGGCTGGCCAATCCCTCCTAATTCTGGCTCTGGCTTTCTTGGCCTTTACAAAGCTAATACTCAATCCCCTCCAATTGTTCATATTGAGTTTCAAATTGGCTTAAATGCTGCCTATCCTCCTTATCAACATGTGGGCATTAATATTAACTCTCTTTCTTCTTCTAATTCCACTCCTTGGGATGCTACTTTACATAGTGGAGATATTGCTGATGTGTGGATTTCTTATGATTCCAATACTAAAAACTTGAGTGTGTCATGGGAATACCAAAGGACAAAATTATCACTTGAAAATCATTTTTTGAGTTACCAGGTTGATTTAAGGGAGGCTCTTCCTCAACAGGTTACGTTTGGATTTTCAGCTACAACTGTCAACCCAATTTCTTTCAAAATAGATCAATTCCTATGGAACGAAGATCGAATAGCTTTTCAAGGAGATGCGTTTCTCTCTGATCGTGGGATTCAATTCAGCCACTCCGTTTATCATTGCCAAGTGGGTCAAGCAATCTACAGAGATATTGTTCCAATTTGGGACATTGAAAAAGGAAAACTCACTGATTTCTCCACCCATTTCGCCTTCTCTATTGATACCCAAAATAACAAAACATATGGCAGTGGGATTGTTTTCTTCTTAGCTCCAGTTGGGTTTCAAATCCCCATCAACTCAGCTGCAGGTTTCTTTGGCCTTTACAACAAAACTTACATGAATTCATCCCAAAACCAAATTCTTCATGTTGAATTTGATTCTCATGCAGATCCTGATTGGGATCCTTCATATCAACATGTGGGTATAAACATTAACTCTGTTACTTCTTCTATTCTCACTCCTTTGAATGTTAGCTTTCACAGTGGAGACATTGCTGATGTGTGGATCTCCTACAATTCATTCACCAAAAATTTTACTGTCTCATGGAAATGGAAATCCACCTCGAATTCATTTGAAGATACCACCTTGAGTTATAAGATTGATTTAACCACGATTCTTCCTCAATGGGCGGTGGTGGGATTTGCAGGGGCAACAGGAACAAACTTCGAGAGACATACTCTGTTTTCATGGGAGTTCAACTCGAGCTTGGATATAAAGCAAACAAGTAAAAATAATGGGAATATAGTTAAAATAGTTGTGGGAGTAACGGTTTCAGTTGGAGTTTTTATTATTATAGTCATAGCAACAATATTTGTAGTAATGTGTAAATTGAAACAGAGGAAGAAAACAGGGGAGGAAGTAAATTTGACAAGCATGAACCAAGATTTGGAAAGAGAAGCTGGACCCAGAAGGTTTTCCAGCAAGCTTCTTGGGATGGCAACCAATAACTTCTCAAATGAAAGAAAGCTAGGGGAAGGAGGATTTGGAGCAGTGTACAGAGGGTACATACCAGACATAGATTTGACAGTGGCTGTGAAGAAAATCTCAAGGGGTNTAGCCTTTGTAGTACTTTGGAGATTGAAACAAAAGAAAAGAAAATCAGAAGAAGAAAAGTCTGAGGAGGTAAACTTGACATCCATTAATGATGATTTGGAAAGAGGGGCTGGACCCAGAAGGTTTTCTCATAAGCTACTAGCCATGGCTACCAACAACTTCTCCAATGAAAGGAAGCTTGGTCAAGGAGGATTTGGAGCAGTGTACAGAGGGTACATACCAGACATAGATTTGACAGTGGCTGTGAAGAAAATCTCAAGGGGTTCAAGACAGGGGAGAAAAGAGTACATAACTGAAGTGAAGATCATTAGTCGGCTTCGCCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCATGATAAGGGTGAGTTCTTGTTGGTTTATGAATTCATGCCAAATGGTAGTCTTGATTCTCATCTCTTTGGTAAGAGAACCCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCTTCTGCATTGCTATATCTCCATGAAGAATGGGAACAATGCGTGGTTCATAGAGACATTAAACCTAGCAATGTCATGTTAGATTCAAATTTCAATGCTAAATTGGGAGATTTCGGTCTAGCTCGATTAATGGACCACGAGTTGGGTGGTCAAACAACTAGGCTCGCAGGGACTTTTGGTTATTTAGCCCCTGAATATGTAACCACAGGCAGAGCTAGTAAAGAATCTGATATCTTTAGTTTTGGGTTCGTAGCTTTGGAGATTGCTACAGGAAGAATGTCAAGAACTTGCATTGATCAAGATGAATCTTACAAAGGATTAGTAGAATCAGTTTGGGATCTGTATGAAAGTGGGCAATTGCTAGTGGGGATGGATGAGAAATTGCAATCTAAGTATGATGAAAAAGAGGCTGAGTGTTTGATGATGGTTGGATTATGGAGTTCTTATCCTGACCCTAATCTTAGACCTTCCATGAAACAAGCAATTCAAGTTCTTAATTTTGAGAGAAATATGCCAAATCTTCCAAGTAAAATGCCACTTGCTTTTTATAACGCTCCATCCACATCAATCAACTCAAACCAACCTTCCAAACATTACTCCAAGCCTTGGTCACATGTGTCTTCCTTGAAAACCCAATGA 2889 39.36 MATSLYALSKQSMVVVVVLLLHLSLSVDSISFKSYNSMPNIQNYIFLREDVVHSPGDIPLYDPHSYDFSVYQTIYKHPLQIWDSTTQKLTDFSTHFTFQFDSLHATTYCGGCAFFLAPIGWPIPPNSGSGFLGLYKANTQSPPIVHIEFQIGLNAAYPPYQHVGININSLSSSNSTPWDATLHSGDIADVWISYDSNTKNLSVSWEYQRTKLSLENHFLSYQVDLREALPQQVTFGFSATTVNPISFKIDQFLWNEDRIAFQGDAFLSDRGIQFSHSVYHCQVGQAIYRDIVPIWDIEKGKLTDFSTHFAFSIDTQNNKTYGSGIVFFLAPVGFQIPINSAAGFFGLYNKTYMNSSQNQILHVEFDSHADPDWDPSYQHVGININSVTSSILTPLNVSFHSGDIADVWISYNSFTKNFTVSWKWKSTSNSFEDTTLSYKIDLTTILPQWAVVGFAGATGTNFERHTLFSWEFNSSLDIKQTSKNNGNIVKIVVGVTVSVGVFIIIVIATIFVVMCKLKQRKKTGEEVNLTSMNQDLEREAGPRRFSSKLLGMATNNFSNERKLGEGGFGAVYRGYIPDIDLTVAVKKISRGXAFVVLWRLKQKKRKSEEEKSEEVNLTSINDDLERGAGPRRFSHKLLAMATNNFSNERKLGQGGFGAVYRGYIPDIDLTVAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHLFGKRTPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKPSNVMLDSNFNAKLGDFGLARLMDHELGGQTTRLAGTFGYLAPEYVTTGRASKESDIFSFGFVALEIATGRMSRTCIDQDESYKGLVESVWDLYESGQLLVGMDEKLQSKYDEKEAECLMMVGLWSSYPDPNLRPSMKQAIQVLNFERNMPNLPSKMPLAFYNAPSTSINSNQPSKHYSKPWSHVSSLKTQ 962
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 33475743 33483002 + ClCG09G017030.1 Cla09g01671 281091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01671 962 SUPERFAMILY Concanavalin A-like lectins/glucanases 244 477 IPR013320 -
Cla09g01671 962 Pfam Protein kinase domain 646 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01671 962 Pfam Legume lectin domain 34 243 IPR001220 GO:0030246
Cla09g01671 962 Pfam Legume lectin domain 245 484 IPR001220 GO:0030246
Cla09g01671 962 PANTHER PUTATIVE-RELATED 243 592 - -
Cla09g01671 962 PANTHER - 243 592 - -
Cla09g01671 962 CDD lectin_legume_LecRK_Arcelin_ConA 245 476 IPR001220 GO:0030246
Cla09g01671 962 SUPERFAMILY Protein kinase-like (PK-like) 629 945 IPR011009 -
Cla09g01671 962 Gene3D - 244 499 - -
Cla09g01671 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672|GO:0006468
Cla09g01671 962 CDD lectin_legume_LecRK_Arcelin_ConA 30 246 IPR001220 GO:0030246
Cla09g01671 962 Gene3D Transferase(Phosphotransferase) domain 1 722 937 - -
Cla09g01671 962 Gene3D Phosphorylase Kinase; domain 1 542 622 - -
Cla09g01671 962 Gene3D Phosphorylase Kinase; domain 1 630 721 - -
Cla09g01671 962 ProSiteProfiles Protein kinase domain profile. 645 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01671 962 SMART serkin_6 645 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01671 962 CDD STKc_IRAK 651 916 - -
Cla09g01671 962 Gene3D - 30 243 - -
Cla09g01671 962 PANTHER PUTATIVE-RELATED 23 241 - -
Cla09g01671 962 PANTHER PUTATIVE-RELATED 599 943 - -
Cla09g01671 962 PANTHER - 23 241 - -
Cla09g01671 962 PANTHER - 599 943 - -
Cla09g01671 962 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 243 IPR013320 -
Cla09g01671 962 ProSitePatterns Protein kinases ATP-binding region signature. 651 675 IPR017441 GO:0005524
Cla09g01671 962 SUPERFAMILY Protein kinase-like (PK-like) 536 592 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00827 Cla-Chr5:8103769 Cla09g01671 Cla-Chr9:33475743 9.80E-07 dispersed
Cla09g01671 Cla-Chr9:33475743 Cla10g00790 Cla-Chr10:15972157 4.72E-28 dispersed
Cla09g01668 Cla-Chr9:33440685 Cla09g01671 Cla-Chr9:33475743 1.06E-47 proximal
Cla09g01671 Cla-Chr9:33475743 Cla09g01672 Cla-Chr9:33490479 2.55E-46 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80819 PF00069 Pkinase 4.20E-48 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01671 - - jre:108994233 640.573