Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01701 ATGTTTAGAATCTACAAAGACGGTCGCGTCCAAAGACTCCAAATCGCCTCCGACATTGTCCCTGCCGACGCCGATGACCCCAAATCCGCTTTCCGATCAAAAGATGTCACGATCTTAGCAGATCCCGCCATATCGGTGCGTATTTTCATTCCCTCATCCGCTGATCCAAATCGGAAGCTACCCCTCATCTTGTACGTCCACGGTGGAGCCTTCTGCTTCGAATCAGCTTTCAATTTGCAGTACCACACCCACGTGGGATCTCTTGCTACCAAGGCCAACGCCGTCGCTGTCTCCGTCGAGTACCGTCTCACGCCGGAGCATCCGATCGCCGCCTGCTACGACGACTGTTGGGATGCTTTACGGTGGGTTGCGACACACGTGAACAGGGATGGTCCAGAGCCGTGGCTGAACAAGCACGCAGATTTGGATAGGATCTGTTTGGCGGGCGACAGCGCGGGTGCAAACATCTGCCATCACTTGGCCGCTCGAGCAGGTTCTTCAGCAGAGCAACTGGGTGGAGTGAAGGTGGTGGGAATGGCTTTGATTCACCCGTTCTTTGGCGACGGGGGAGATGATAGGCTGTGGAAGTTTCTGTGTTCGGATCAGACGAGGCCGGTGAGACCAAGCATAGAGGAACTTGCAAAGTTGCCATGTCGGAGAGTGAAGGTTTTTTTGGCAGAAGAAGATTTTTTGAAGTTTGGAGGGAGGAATTACGATGAGGATTTGAAGAGGAGCGGGTGGAATGGGGCGGTGGAGACGGTGGAGCACGACGGAGAAGGTCATGTGCACTGTTACAACTCATACAAATCAAAGGCAATAAGACACATATTTCTCCTTCAATATCCTCCTCTTCATCCGCCGCCCGCTTCTTTCTCCTTTCATCTACTCTCTCCCATGGCTTCCACTGAAATTTCTCACAACTTTTCCCCCATGCTCATCGTTTACAAAGACGGTCGCGCCCACAGGCTCGCCGGAAACGAATTAGTCGATCCCTCTCTCGACCCCCTAACCGGCGTTGAGTCCAAAGACGTCGTCATCTCGCCGGAAACCGCCGTCTCTGCTCGGATTTACAGACCCAAACCCACCGCACAATCTCACAAGCTTCCTCTTCTCGTTTATATTCACGGTGGAGGATTCTGTATCGAATCGGCATTTTCCCCCACCTACCACCGCCATCTCAACTCCTTAGTCGCTGAAGCCAACGTCGTTGCCGTCTCCGTCGAGTACCGGCGAGCTCCGGAGCACCCGCTACCGATCGCTTATGAAGATACTTGGGCCGCTTTGAAATGGGTTGCGGCCCACTCGGCCAGAACCGGGTCGGAGGAGTGGTTGAATGGAATTGCAGATTTGGACCGGGTTTATTTCGCCGGAGATAGCGCTGGAGCCAACATCGCTAATCAAATGGCGATCCGGGTCAGGACAGAGGGGGTGTCCGGGTTGAATCTGAGGGGATTGATTTTGGTTCATCCATATTTCTGGGGAGGGAAATTGATCGGAGATGAAGAGAAGCTGAATCCGGAAGATAGATCGTTTATTGAGAAATTGTGGTATTTGGTTTGCCCTACAATTAGCGGGTTGGATGACCCGATTGTGAACCCGGAATTTGAACCGAAATTGGGGCTGGTAGCGGCAGAGAGAGTGACGGTTTATGTGGCGGAGAAGGACGCTCTGAAAGACAGAGGGTGGTTTTACAGTGAGTGTCTGAAGAAATCGGGATGGGGCGGGGCCGTCGACGTCGTCGAGACGAAGGGCCAAGGCCACGTGTTTCATTTGTTCAACCCCACGTCCAACGAGGCGGTTGATTTCGTCGGAAAGCTTGCCGCCTTCATCAATGGCGGGCGCCCTGAGTGA 1851 53.38 MFRIYKDGRVQRLQIASDIVPADADDPKSAFRSKDVTILADPAISVRIFIPSSADPNRKLPLILYVHGGAFCFESAFNLQYHTHVGSLATKANAVAVSVEYRLTPEHPIAACYDDCWDALRWVATHVNRDGPEPWLNKHADLDRICLAGDSAGANICHHLAARAGSSAEQLGGVKVVGMALIHPFFGDGGDDRLWKFLCSDQTRPVRPSIEELAKLPCRRVKVFLAEEDFLKFGGRNYDEDLKRSGWNGAVETVEHDGEGHVHCYNSYKSKAIRHIFLLQYPPLHPPPASFSFHLLSPMASTEISHNFSPMLIVYKDGRAHRLAGNELVDPSLDPLTGVESKDVVISPETAVSARIYRPKPTAQSHKLPLLVYIHGGGFCIESAFSPTYHRHLNSLVAEANVVAVSVEYRRAPEHPLPIAYEDTWAALKWVAAHSARTGSEEWLNGIADLDRVYFAGDSAGANIANQMAIRVRTEGVSGLNLRGLILVHPYFWGGKLIGDEEKLNPEDRSFIEKLWYLVCPTISGLDDPIVNPEFEPKLGLVAAERVTVYVAEKDALKDRGWFYSECLKKSGWGGAVDVVETKGQGHVFHLFNPTSNEAVDFVGKLAAFINGGRPE 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34104424 34121836 - ClCG09G017350.2 Cla09g01701 281121

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01701 616 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 145 157 IPR033140 -
Cla09g01701 616 SUPERFAMILY alpha/beta-Hydrolases 300 611 IPR029058 -
Cla09g01701 616 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 453 465 IPR033140 -
Cla09g01701 616 SUPERFAMILY alpha/beta-Hydrolases 5 272 IPR029058 -
Cla09g01701 616 Pfam alpha/beta hydrolase fold 371 590 IPR013094 GO:0016787
Cla09g01701 616 Pfam alpha/beta hydrolase fold 63 261 IPR013094 GO:0016787
Cla09g01701 616 Gene3D alpha/beta hydrolase 293 612 IPR029058 -
Cla09g01701 616 Gene3D alpha/beta hydrolase 1 276 IPR029058 -
Cla09g01701 616 PANTHER ARYLACETAMIDE DEACETYLASE 301 611 - -
Cla09g01701 616 PANTHER ARYLACETAMIDE DEACETYLASE 1 272 - -
Cla09g01701 616 PANTHER CARBOXYLESTERASE 2-RELATED 1 272 - -
Cla09g01701 616 PANTHER CARBOXYLESTERASE 2-RELATED 301 611 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01701 - - K13258 csv:101219532 548.895
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02025 Cla-Chr5:31990431 Cla09g01701 Cla-Chr9:34104424 3.85E-08 dispersed
Cla08g01546 Cla-Chr8:28187132 Cla09g01701 Cla-Chr9:34104424 2.66E-64 dispersed
Cla09g01701 Cla-Chr9:34104424 Cla09g01704 Cla-Chr9:34157804 7.32E-08 dispersed
Cla09g01700 Cla-Chr9:34069613 Cla09g01701 Cla-Chr9:34104424 4.92E-66 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g441 Blo02g00823 . . . . . . . . . . Cma20g00894 . . . . . . . . . . . . . . . . . . . . . . . Lsi10g00298 . . . . . . . . . . . Sed01g0344 . . . . . . . . Bhi10g02088 Tan05g1409 Cmetu11g1661 . Hepe08g1072 . . Cla09g01701 Cam09g1797 Cec09g1860 Cco09g1950 . . Cre01g0710 . Csa02g01191 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002370 4 3 1 1 2 2 0 2 2 2 2 2 3 2 2 4 2 2 3 2 2 4 3 1 1 2 1 2 2 1 62