Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01704 ATGGATTCTGAGGCCGGCGATGGAGATGGGGTTGTCTTCGAGTTCCTCCCTGCCTTCCGCGTCTTCAAAAGCGGCCGTGTCCAGAGGCTCTTCCCCGACGACCGCCTTCCGCCCTCCACCGATCCACTTACCGGCGTCCAATCCAAAGACATCCTCATCGATCCACAAACCCAACTCTCCGTCCGGATCTTCCTCCCACATGTTTCCCACTCCACCAAGAAGCTCCCGCTTCTAATTTACATCCACGGCGGCGCATTCTCCATCGGCTCCGTCGCGACGCCGATCTACCACCACCACCTGATCTCCCTGGCCGCTGAGGCCAATGCCGTGGCACTCTCAGTAGAGTACCGTCTGGCGCCGGAGCATCCACTCCCAGCGGCATACGACGACGCGTGGGCGGCGGTGGAATGGGCGGCGTCGCATTCCAATGGGAACGGCGAGGAGATTTGGCTGAACCAACACGCAGATTTCAACCACGTATCGGTGGTGGGGGATAGCGCTGGGGCCAACATTTCGTACAATGTGGTGGTCCGGGCTAGCGAGAGTAATAATGGGGCGAAGGGAATGAAGATAAGTGGGTTGGGTCTGGTTCATCCGTTCTTCATGATTGACAAGCCTGATAAGTTGATAGACTATATTTTCCCCACGTCATCGGGGTTGGATGATCCGAGGCTGAACCCATGGGCCAACCCGAAACTAGGGAAGCTACGGTGTGAGCGAGTTTTGATATTGGCGGCGGATCTTGATTTGCTAAAGGATAGGGCACATGGGTTTTACGCAGCCTTGAGGGAGAATGGGTTTGAAGGGTCGGTGGAGATGGTTGAAACCCAAGGGGAGGACCACGTGTTTCATTTGTTTAACCCCAACACCCACAACGCTATTGCATTGCTCAAAAAACTCGCTTCCTTTATCCAATCAATACACCACGGTAATGCTCCCACTCCTAATATACACTCATGGCGGCACCTTCTCAGTCGGCTCCATTGCTTGGTCTCCCTTGCTACTGAGACCAATACCATCACTCTCTTTGTTGAATACCGCCTTGCGCCAGAGCATCCTATTCTGGCATCGTACGATGACGTTTGGGTGGTGGTGGAATGGGCGAAATCACAATCCAATTGCGATAGCGCAAAGATTTGA 1140 54.3 MDSEAGDGDGVVFEFLPAFRVFKSGRVQRLFPDDRLPPSTDPLTGVQSKDILIDPQTQLSVRIFLPHVSHSTKKLPLLIYIHGGAFSIGSVATPIYHHHLISLAAEANAVALSVEYRLAPEHPLPAAYDDAWAAVEWAASHSNGNGEEIWLNQHADFNHVSVVGDSAGANISYNVVVRASESNNGAKGMKISGLGLVHPFFMIDKPDKLIDYIFPTSSGLDDPRLNPWANPKLGKLRCERVLILAADLDLLKDRAHGFYAALRENGFEGSVEMVETQGEDHVFHLFNPNTHNAIALLKKLASFIQSIHHGNAPTPNIHSWRHLLSRLHCLVSLATETNTITLFVEYRLAPEHPILASYDDVWVVVEWAKSQSNCDSAKI 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34157804 34166930 - ClCG09G017410.1 Cla09g01704 281124

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01704 379 Pfam alpha/beta hydrolase fold 330 373 IPR013094 GO:0016787
Cla09g01704 379 Pfam alpha/beta hydrolase fold 78 284 IPR013094 GO:0016787
Cla09g01704 379 Gene3D alpha/beta hydrolase 20 316 IPR029058 -
Cla09g01704 379 PANTHER ARYLACETAMIDE DEACETYLASE 8 304 - -
Cla09g01704 379 PANTHER CARBOXYLESTERASE 13-RELATED 330 373 - -
Cla09g01704 379 PANTHER ARYLACETAMIDE DEACETYLASE 330 373 - -
Cla09g01704 379 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 78 93 IPR002168 GO:0016787
Cla09g01704 379 SUPERFAMILY alpha/beta-Hydrolases 327 373 IPR029058 -
Cla09g01704 379 Gene3D alpha/beta hydrolase 317 379 IPR029058 -
Cla09g01704 379 PANTHER CARBOXYLESTERASE 13-RELATED 8 304 - -
Cla09g01704 379 SUPERFAMILY alpha/beta-Hydrolases 20 307 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01704 - - - cmax:111499978 464.536
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01700 Cla-Chr9:34069613 Cla09g01704 Cla-Chr9:34157804 1.58E-74 dispersed
Cla09g01701 Cla-Chr9:34104424 Cla09g01704 Cla-Chr9:34157804 7.32E-08 dispersed
Cla09g01704 Cla-Chr9:34157804 Cla05g01743 Cla-Chr5:29274548 2.46E-49 dispersed
Cla09g01703 Cla-Chr9:34138090 Cla09g01704 Cla-Chr9:34157804 1.10E-07 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g444 Blo02g00821 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi10g00303 . . . . . . . . . . . . . . . . . . . Cpe05g01218 Bhi10g02086 . . . Hepe08g1070 . . Cla09g01704 Cam09g1801 Cec09g1862 Cco09g1954 . . Cre01g0706 . Csa02g01193 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001193 1 6 2 2 1 3 2 3 3 1 2 3 2 1 2 2 3 5 2 3 1 4 5 2 3 7 2 2 2 1 78