Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01712 ATGTCATTTTGGTTAGGACGTAGAGATGGCTTAACAGCAAGCATAAAATCAGTGCTGGCACAGCTCCCATCTCCTAAGGCATCTCTAGAGAACAACACCGCCAAGTTCATCTCAAAAGGCCTCGACTTAAAGGATCTCGTCGTGCTTTCAGGAGCACACACCATCGGCTTCGCCCGTTGTGTCACATTCAAAGGCCGCCTCTTCAACTACAAAGGCTCCGGGAACCCAGATCCCGACATAAACGCCGCAATGCTCTCCGACCTACGGTCCATGTGCCCCAACAGGAACGACGGCACCAACGCCAATTTGGCGCCGCTGGATGTAGCCAGTTACGACAGATTCGACAACGAGTACTATACGAATCTGATTAGCAATGTTGGGCTTTTGGAGTCGGACCAGGGTCTGATGGCAGACCCCCAGACGGCGCGGATGGTTAGAGATTACAGCTTTGATCTGAATCTGTTCTTCAATGACTTTGCGGAGTCGATGATGAGGATGAGCATGGCTGGGGTTCTGACCGGTCGAGATGGACAGATTCGAAAGGAATGTGGCGCTGTTAATAATGATGATGGCTACTGA 579 51.12 MSFWLGRRDGLTASIKSVLAQLPSPKASLENNTAKFISKGLDLKDLVVLSGAHTIGFARCVTFKGRLFNYKGSGNPDPDINAAMLSDLRSMCPNRNDGTNANLAPLDVASYDRFDNEYYTNLISNVGLLESDQGLMADPQTARMVRDYSFDLNLFFNDFAESMMRMSMAGVLTGRDGQIRKECGAVNNDDGY 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34289676 34290390 - ClCG09G017500.1 Cla09g01712 281132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01712 192 PANTHER PEROXIDASE 72-RELATED 4 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 PANTHER PEROXIDASE 10 4 186 - -
Cla09g01712 192 PRINTS Plant peroxidase signature 105 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 PRINTS Plant peroxidase signature 161 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 PRINTS Plant peroxidase signature 44 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 PRINTS Plant peroxidase signature 121 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 ProSiteProfiles Plant heme peroxidase family profile. 1 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 Gene3D - 4 187 - -
Cla09g01712 192 SUPERFAMILY Heme-dependent peroxidases 2 187 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 Pfam Peroxidase 3 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 Gene3D Peroxidase, domain 2 23 166 - -
Cla09g01712 192 PRINTS Haem peroxidase superfamily signature 107 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 PRINTS Haem peroxidase superfamily signature 45 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01712 192 ProSitePatterns Peroxidases proximal heme-ligand signature. 45 55 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01712 Cla-Chr9:34289676 Cla02g02299 Cla-Chr2:38088261 8.24E-49 dispersed
Cla09g01712 Cla-Chr9:34289676 Cla09g01713 Cla-Chr9:34292212 3.50E-136 tandem
Cla01g01632 Cla-Chr1:31121716 Cla09g01712 Cla-Chr9:34289676 2.10E-66 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01712 K00430 - csv:101209504 354.755