Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01713 ATGCCTCCCAACACTCCTATTATCCTCTCCTTTCTCTTCCTAATTCTTCCTTTCTTCTTCCTTTCATCCTTTTCTGATCCTAATTATAATTATAACAATCAAAATAATGGTTACGCCGAGCTTAGACCTGACTTTTACGACGAGTCGTGCCCCCGTTTGCCGATGATAATTCGGTATCATGTTTGGGCTGCTGTCCAAAATGACTCTAGAATGGCTGCATCGTTGTTGCGGTTGAATTTCCATGACTGCATTGTAGATGGATGTGATGCATCAGTGTTGCTTGACGATACGAAAGATATGAAAGGTGAGAAGAAAGCTCCGGGCAACGTGAACTCGCTCCGAGGGTTTGAAGTGATTGATGGCATAAAAGCAGATGTAGAAACATATTGCCCACAGACAGTTTCATGTGCTGATATTGTGAATCTTGCAGCTAGAGAAGCTGTGTATCTGGTTGGAGGACCGTTTTGGCACCTTCCACTAGGACGTAGAGATGGCTTAACAGCAAGCATAAAATCAGTGCTGGCACAGCTCCCATCTCCTAAGGCATCTCTAGAGAACAACACCGCCAAGTTCATCTCAAAAGGCCTCGACTTAAAGGATCTCGTCGTGCTTTCAGGAGCACACACCATCGGCTTCGCCCGTTGTGTCACATTCAAAGGCCGCCTCTTCAACTACAAAGGCTCCGGGAACCCAGATCCCGACATAAACGCCGCAATGCTCTCCGACCTACGGTCCATGTGCCCCAACAGGAACGACGGCACCAACGCCAATTTGGCGCCGCTGGATGTAGCCAGTTACGACAGATTCGACAACGAGTACTATACGAATCTGATTAGCAATGTTGGGCTTTTGGAGTCGGACCAGGGTCTGATGGCAGACCCCCAGACGGCGCGGATGGTTAGAGATTACAGCTTTGATCTGAATCTGTTCTTCAATGACTTTGCGGAGTCGATGATGAGGATGAGCATGGCTGGGGTTCTGACCGGTCGAGATGGACAGATTCGAAAGGAATGTGGCGCTGTTAATAATGATGATGGCTACTGA 1044 47.89 MPPNTPIILSFLFLILPFFFLSSFSDPNYNYNNQNNGYAELRPDFYDESCPRLPMIIRYHVWAAVQNDSRMAASLLRLNFHDCIVDGCDASVLLDDTKDMKGEKKAPGNVNSLRGFEVIDGIKADVETYCPQTVSCADIVNLAAREAVYLVGGPFWHLPLGRRDGLTASIKSVLAQLPSPKASLENNTAKFISKGLDLKDLVVLSGAHTIGFARCVTFKGRLFNYKGSGNPDPDINAAMLSDLRSMCPNRNDGTNANLAPLDVASYDRFDNEYYTNLISNVGLLESDQGLMADPQTARMVRDYSFDLNLFFNDFAESMMRMSMAGVLTGRDGQIRKECGAVNNDDGY 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34292212 34294645 - ClCG09G017510.1 Cla09g01713 281133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01713 347 Gene3D Peroxidase, domain 2 178 321 - -
Cla09g01713 347 PANTHER PEROXIDASE 10 31 341 - -
Cla09g01713 347 ProSiteProfiles Plant heme peroxidase family profile. 40 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 SUPERFAMILY Heme-dependent peroxidases 41 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 Pfam Peroxidase 59 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Cla09g01713 347 PANTHER PEROXIDASE 72-RELATED 31 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Cla09g01713 347 Gene3D - 44 342 - -
Cla09g01713 347 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01713 347 CDD secretory_peroxidase 40 341 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01632 Cla-Chr1:31121716 Cla09g01713 Cla-Chr9:34292212 1.16E-130 dispersed
Cla09g01713 Cla-Chr9:34292212 Cla07g00832 Cla-Chr7:23049341 7.92E-98 dispersed
Cla09g01712 Cla-Chr9:34289676 Cla09g01713 Cla-Chr9:34292212 3.50E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01713 K00430 - csv:101209504 600.897