Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g01783 | ATGGATTTAGCCGCCCCAGCTCCCATCACAACTAGTAGTAATAACACCAAATCTCCCGACGCTGACTCCGATACTCCGACAAAGATTCCGCCGTCTTCTTCCCTAAAATCCCTTCCCTTCACCAATGGTGTTCTCAAGCGCCACCATCACCGTCAACCGTCTGTCATTGTTTCTTACAAAGAATGTCTCAAAAATCACGCTGCCAGTTTAGGAGCTCACGCTTTGGATGGATGTGGCGAATTTATGCCTTCCCCTTCTGCCACACCCACTGATCCCACATCGCTTAAATGCGCCGCATGCGGCTGTCACCGGAATTTCCACCGCCGTGACCCGGAAGACCCAATCTCAACTTTAGCTATCAATACGGCGCCTACTCATGTTATTGAGTATCAGCCTCACCACCGTCATCACCCCCCACCGCCGTCGCTTCCCGGGAACCGAAGCCCGAATTCGGCATCTCCTCCGCCGATCTCGTCGTCGTACTACCCATCTGCGCCGCATATGCTACTGGCGCTTTCAGCCGGGTTGTCGGGTCGTCCGCCGGAAAATATCACTCAGGGGAATAATTCGGTGCTGACGGTGAGTCCGAACACCCGGAAACGGTTTCGGACGAAATTTAGCAATGAGCAGAAGGAAAAAATGCTGGATTTCGCGGAACGAGTTGGATGGAAAATGCAAAAGAGAGATGAAGATTTGGTTCGAGATTTTTGCAATCAAGTTGGAGTTGAAAGAGGAGTTCTCAAAGTATGGATGCATAACAACAAGAATACCATGGGAAAAAAGCCCGACTCCAATGGCACCACCACCGCCGCCGCCGCAACCGCCGCCGTCAACAACAACGAAGATGGACCAGATGGAGGCTTACATATGCATGTTGGCTCAAATGGGTCATCTTCTTCTTCTTGA | 906 | 51.32 | MDLAAPAPITTSSNNTKSPDADSDTPTKIPPSSSLKSLPFTNGVLKRHHHRQPSVIVSYKECLKNHAASLGAHALDGCGEFMPSPSATPTDPTSLKCAACGCHRNFHRRDPEDPISTLAINTAPTHVIEYQPHHRHHPPPPSLPGNRSPNSASPPPISSSYYPSAPHMLLALSAGLSGRPPENITQGNNSVLTVSPNTRKRFRTKFSNEQKEKMLDFAERVGWKMQKRDEDLVRDFCNQVGVERGVLKVWMHNNKNTMGKKPDSNGTTTAAAATAAVNNNEDGPDGGLHMHVGSNGSSSSS | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 35222422 | 35223327 | + | ClCG09G018230.1 | Cla09g01783 | 281203 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g01783 | 301 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 11 | 282 | - | - | |
Cla09g01783 | 301 | MobiDBLite | consensus disorder prediction | 137 | 151 | - | - | |
Cla09g01783 | 301 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 199 | 256 | IPR006455 | - | |
Cla09g01783 | 301 | SUPERFAMILY | Homeodomain-like | 187 | 260 | IPR009057 | - | |
Cla09g01783 | 301 | Pfam | ZF-HD protein dimerisation region | 57 | 111 | IPR006456 | - | |
Cla09g01783 | 301 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 59 | 110 | IPR006456 | - | |
Cla09g01783 | 301 | PANTHER | HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN | 11 | 282 | - | - | |
Cla09g01783 | 301 | MobiDBLite | consensus disorder prediction | 275 | 301 | - | - | |
Cla09g01783 | 301 | MobiDBLite | consensus disorder prediction | 131 | 160 | - | - | |
Cla09g01783 | 301 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 59 | 110 | IPR006456 | - | |
Cla09g01783 | 301 | MobiDBLite | consensus disorder prediction | 7 | 39 | - | - | |
Cla09g01783 | 301 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Cla09g01783 | 301 | Gene3D | - | 186 | 260 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g01483 | Cla-Chr8:27702836 | Cla09g01783 | Cla-Chr9:35222422 | 1.63E-45 | dispersed | |
Cla09g01783 | Cla-Chr9:35222422 | Cla11g00012 | Cla-Chr11:134411 | 2.24E-48 | dispersed | |
Cla10g01433 | Cla-Chr10:29446793 | Cla09g01783 | Cla-Chr9:35222422 | 1.90E-104 | wgd | |
Cla05g02443 | Cla-Chr5:35886866 | Cla09g01783 | Cla-Chr9:35222422 | 7.56E-57 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61767 | PF04770 | ZF-HD_dimer | 9.90E-29 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g01783 | - | - | csv:101213548 | 450.669 |