Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01799 ATGCAACGGTCAACGGAGGTAAGCAACAGGGAGGTAGTAGTGGGCGTCAGCAAATGGTATGGAGTAGCGCTAATTGATAAAAGAAAGATGTTGGAAGGGAAGGAGGAACACTACTTGAAGATGGGTGACAAGGATGAAGTTTTGGAAGCTGTTGTGAAGGAAGCTGTTGATTTGGAGAACGTTCCACTTGAAGAGGTTTTTCAGACGTTGAGATGTAATACAAATGGTTTGACAACAGAGGCGGCTCATGAGAGGTTGGCCATTTTTGGGCACAATAAGCTTGAAGAAAAGAAGGAGAGTAAGGTTCTAAAGTTCTTGGGATTTATGTGGAACCCTCTCTCATGGGTCATGGAAGCTGCAGCTATAATGGCTATTGCTCTAGCTAATGGAGGAGGAAAACCTCCAGATTGGCAGGATTTTGTTGGGATCATAACCTTGTTAATTATCAATTCAACTATTAGTTTTATAGAGGAGAACAATGCTGGAAATGCTGCGGCTGCTCTCATGGCTCGTCTTGCACCGAAAGCTAAGGTTCTTAGAGATGGGAAGTGGGTTGAGGAGGAGGCATCAGTCCTTGTCCCTGGTGATATAATTAGCGTCAAGCTCGGTGACATTATTCCTGCTGATGCTCGCCTCCTTGAAGGTGATCCATTAAAGATCGATCAATCTGCTCTCACAGGCGAATCACTTCCTGTCACTAAAGGCCCCGGTGACAGTGTGTATTCGGGTTCAACATGCAAACAGGGAGAAATTGAAGCAGTTGTTATTGCTACTGGTGTTCATACATTCTTTGGCAAAGCTGCTCATCTTGTAGACTCCACGAATCAAGTGGGTCACTTCCAAAAGGTCTTGACTGCTATTGGAAATTTCTGCATATGTTCCATTGCTGTGGGCATGATTGTTGAGATTATTGTCATGTACCCAATCCAACATCGGGCTTACCGACCAGGGATTGACAATCTCCTGGTTCTTCTCATTGGAGGAATTCCTATCGCAATGCCAACTGTTTTGTCGGTCACAATGGCGATTGGATCACACCGTCTTTCTCAACAGGGAGCTATCACTAAACGAATGACTGCAATAGAAGAAATGGCTGGAATGGACGTGCTCTGTAGCGACAAAACAGGAACACTGACCTTAAATAAGCTTACTGTTGACAAGACTCTGATAGAGGTTTTTGCCAAGGGAGTGGACATGGATACTGTCGTTCTCATGGCAGCTCGAGCCTCTCGAGTTGAAAATCAAGACGCAATAGATGCTGCTATTGTAGGGATGTTAAGTGATCCAAAGGAGGCACGAGCAGGCATTCAAGAGGTTCACTTCCTTCCATTCAACCCAACTGACAAGCGAACTGCCCTGACATACATTGATGCCGATGGAAAAATGCATAGAGTCAGCAAGGGTGCTCCAGAGCAGATCTTGAATCTTGCACACAACAAATCAGAGATAGAAAGAAGGGTTCATGCTGTGATTGATAAGTTCGCAGAGCGAGGATTGCGCTCTCTTGCAGTGGCATACCAAGAGGTTCCAGATGGAAGAAAGGAGAGTCATGGAGGCCCATGGCAATTCATCGGCCTAATGCCTCTGTTTGACCCACCTAGACATGACAGTGCAGAGACAATTAGGAGAGCTTTGAATCTTGGTGTAAATGTTAAAATGATCACAGGTGATCAACTAGCTATAGGAAAGGAAACAGGACGTCGGCTCGGGATGGGAACAAATATGTACCCTTCATCTGCATTATTAGGACAGAACAAAGATGAATCAACTTCTGGATTGCCTGTTGATGACTTAATTGAGAAGGCTGATGGATTTGCTGGTGTATTTCCTGAGCACAAATATGAGATTGTGAAACGTTTACAAGCTCGGAAACATATATGTGGAATGACTGGAGATGGTGTTAATGATGCCCCCGCTCTTAAAAAGGCCGATATTGGCATAGCAGTTGCAGATGCAACTGATGCAGCTCGTAGTGCTTCTGACATTGTTCTTACAGAGCCTGGTCTTAGCGTTATTATAAGTGCTGTTCTAACCAGCAGGGCCATCTTCCAGAGGATGAAAAATTACACGCTTGGATTCATGTTGCTGGCCCTTATATATCAATTTGACTTTCCACCTTTCATGGTTCTAATCATTGCTATTCTTAATGATGGTACCATAATGACAATATCAAAGGATAGAGTGAAACCATCTCCTCTGCCAGATAGCTGGAAACTGGCAGAGATTTTTGGCACTGGAATTATACTTGGAGGTTATCTGGCTATGATGACCGTTATTTTCTTCTGGGCGGCTTACCGAACTGACTTCTTTCCTCGTACATTTGGGGTTTCTAGCCTTCAGAAGAAGGACGAGGATGATTTCAGAAAGCTAGCTTCAGCAATATACCTGCAAGTGAGTACAATTAGTCAGGCCCTCATCTTTGTGACACGATCTCGGAGTTGGTCATTTGTGGAGCGTCCTGGCCTTTTATTGGTTGCAGCCTTTGTTATTGCTCAGCTAGTAAGTGAACTGTTAAATTCTAGCTACATCTTGACTTCTGACTTTGTGATTGCTACACTGATTGCTGTTTATGCAAACTGGAGTTTTGCTGCAATAGAAGGAATTGGCTGGGGCTGGGCTGGTGTTGTGTGGCTTTACAACCTCATCTTTTATTTCCCACTTGATTTAATCAAGTTTGCAATCAGATATGCCATTAGTGGTAGAGCATGGGACCTTGTCATTGAACAAAGGATTGCCTTTACAAGGAAGAAAGATTTTGGGAAGGAAGAGCGTGAGCTCAAATGGGCACATGCACAAAGGACCCTTCATGGGCTGCAGCCACCTGAGGCTAAGATGTTCTCCGAGCGCACAACTTATACAGAACTCAATCAAATGGCAGAGGAAGCAAAACGACGAGCTGAAATTGCAAGGCTGAGGGAGCTGCACACACTGAAAGGTCACGTTGAATCAGTGGTGAGGCTGAAAGGTCTTGATATCAGCACGATTCAGCAGTCATACACGCTCCATGATTATTGCCTGGAAACTGCAGAAGTTACTCAAAGGGTGACAATGTATGCAAAGCTAAGTGTGAGGTGTGCACGGGTGAATATATATACTTTTGTCGTCAATAAAAGAAAAACCTGTGGCATTTTTGCTAGAGTTCCGTATGAGCTATTGGGAAAATAA 3165 44.2 MQRSTEVSNREVVVGVSKWYGVALIDKRKMLEGKEEHYLKMGDKDEVLEAVVKEAVDLENVPLEEVFQTLRCNTNGLTTEAAHERLAIFGHNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWVEEEASVLVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFAKGVDMDTVVLMAARASRVENQDAIDAAIVGMLSDPKEARAGIQEVHFLPFNPTDKRTALTYIDADGKMHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESHGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESTSGLPVDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTLGFMLLALIYQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFGTGIILGGYLAMMTVIFFWAAYRTDFFPRTFGVSSLQKKDEDDFRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVAAFVIAQLVSELLNSSYILTSDFVIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYFPLDLIKFAIRYAISGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLQPPEAKMFSERTTYTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDISTIQQSYTLHDYCLETAEVTQRVTMYAKLSVRCARVNIYTFVVNKRKTCGIFARVPYELLGK 1054
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35503369 35512285 - ClCG09G018420.1 Cla09g01799 281219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01799 1054 SUPERFAMILY HAD-like 367 677 IPR036412 -
Cla09g01799 1054 Pfam E1-E2 ATPase 172 350 - -
Cla09g01799 1054 PRINTS P-type cation-transporting ATPase superfamily signature 221 235 - -
Cla09g01799 1054 PRINTS P-type cation-transporting ATPase superfamily signature 630 649 - -
Cla09g01799 1054 PRINTS P-type cation-transporting ATPase superfamily signature 653 665 - -
Cla09g01799 1054 PRINTS P-type cation-transporting ATPase superfamily signature 371 385 - -
Cla09g01799 1054 PRINTS P-type cation-transporting ATPase superfamily signature 547 557 - -
Cla09g01799 1054 PRINTS P-type cation-transporting ATPase superfamily signature 525 536 - -
Cla09g01799 1054 PANTHER PLASMA MEMBRANE ATPASE 43 981 - -
Cla09g01799 1054 ProSitePatterns E1-E2 ATPases phosphorylation site. 373 379 IPR018303 -
Cla09g01799 1054 CDD P-type_ATPase_H 76 892 IPR006534 GO:0008553|GO:0016021|GO:0120029
Cla09g01799 1054 SFLD Haloacid Dehalogenase 353 681 - -
Cla09g01799 1054 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 76 838 IPR006534 GO:0008553|GO:0016021|GO:0120029
Cla09g01799 1054 Gene3D - 368 667 IPR023214 -
Cla09g01799 1054 Gene3D - 174 258 - -
Cla09g01799 1054 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 143 395 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla09g01799 1054 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 605 702 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla09g01799 1054 SUPERFAMILY Calcium ATPase, transduction domain A 174 271 IPR008250 -
Cla09g01799 1054 Gene3D - 950 1001 - -
Cla09g01799 1054 PANTHER CALCIUM-TRANSPORTING ATPASE 43 981 - -
Cla09g01799 1054 SMART Cation_ATPase_N_a_2 57 129 IPR004014 -
Cla09g01799 1054 Coils Coil 952 972 - -
Cla09g01799 1054 SFLD p-type atpase 353 681 IPR044492 -
Cla09g01799 1054 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 897 IPR023298 -
Cla09g01799 1054 Gene3D - 136 839 - -
Cla09g01799 1054 Gene3D - 383 530 IPR023299 GO:0000166
Cla09g01799 1054 Pfam haloacid dehalogenase-like hydrolase 367 644 - -
Cla09g01799 1054 Pfam Cation transporter/ATPase, N-terminus 60 123 IPR004014 -
Cla09g01799 1054 PRINTS H+-transporting ATPase (proton pump) signature 661 686 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla09g01799 1054 PRINTS H+-transporting ATPase (proton pump) signature 630 646 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla09g01799 1054 PRINTS H+-transporting ATPase (proton pump) signature 795 816 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla09g01799 1054 PRINTS H+-transporting ATPase (proton pump) signature 602 618 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla09g01799 1054 PRINTS H+-transporting ATPase (proton pump) signature 487 505 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01799 Cla-Chr9:35503369 Cla11g01171 Cla-Chr11:24491447 0 dispersed
Cla02g01593 Cla-Chr2:30603481 Cla09g01799 Cla-Chr9:35503369 1.26E-17 transposed
Cla01g01418 Cla-Chr1:28677689 Cla09g01799 Cla-Chr9:35503369 0 wgd
Cla06g01611 Cla-Chr6:29630953 Cla09g01799 Cla-Chr9:35503369 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01799 K01535 - csv:101211115 1741.86