Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01811 ATGAAGATCTCCAACTTCTTCCTCACATGGGTTTCTCTGAATCATCTTCTTCTTTTTCTTCTTCTACTTTGTGTTTCTCCATCTTTTTCTGTAGTTCCAGAAGACGATATAAGGTGTCTTCGAGGGGTTAAGAATGCGCTTGTTGATCCTCTCGGAAGGCTTAGTTCATGGGATTTCAAGAACACATCCGTTGGTCATCTCTGCAACAAATTCGTTGGTCTCTCCTGCTGGAACGACCGTGAGAATCGCATTCTCAGCCTCGAGCTTAAAGATATGAAGCTCTCCGGTTCAATTTCTGAAGACTTACAGTACTGTGTAAGCCTGCAGAAACTGGATCTGTCCGGCAATAGCTTTTCCGGCTCGATCCCGCCGCATATTTGTGAGTGGCTTCCGTATTTGGTTAGCATGGATTTGTCGAACAATCAATTTACCGGTCCTATTCCGGCTGATCTCGCTAGATGTTCTTATTTGAATTCGTTGATTTTGTCTGATAATGAGCTTTCTGGTACAATACCAGTTGAGCTCACGAGTCTGGGTAGACTTAACAAATTTTCTGTTGCGAACAATCAACTCACTGGTACGATTCCTTCATTTTTTGATAAATTTGGGAAGGAGGATTTTGATGGGAACAGTGACTTATGTGGAGGGCCTGTTGGATCTAGTTGTGGTGGGTTGAGCAAGAAGAATCTTGCGATTATTATAGCTGCTGGTGTGTTTGGTGCTGCGGCTTCTCTGTTGTTAGGTTTTGGGTTGTGGTGGTGGTATCATTCTAGAATGAACATGAAGAGGAGAAGGGGATATGGGGATGGGATTAGTGGGGATTGGGCTGATAGATTGAGAGCCTATAAGCTTGTTCAAGTTTCCTTGTTTCAAAAGCCTCTTGTGAAAGTTAAGTTGGCTGATTTGATGGCTGCTACTAATAATTTCAATTCTGAAAACATCATAGTTTCTTCTAGAACTGGGACTACTTATAGAGCTGTTCTTCCAGATGGCTCTGTGCTTGCTATAAAGCGGCTCAATACTTGCAAGCTCGGTGAGAAGCTGTTTCGAATGGAGATGAACAGGTTAGGATCGATCAGACACCCGAATTTGACACCCCTTTTGGGATTCTGTGTTGTGGAAGAGGAAAAGCTTTTGGTTTATAAGTATATGTCTAATGGGACTTTGTCCTCTTTGTTACATGGAAATGATGAGATATTGGATTGGCCAACTAGGTTTAGGATTGGTCTGGGTGCAGCTAGAGGTCTTGCTTGGCTTCACCATGGATGCCAACCTCCATTCATGCATCAAAACATATGTTCTAGTGTAATTCTTGTGGATGAAGACTATGATGCTAGGATCATGGATTTTGGATTGGCAAGGTTGATGGCTTCAGATTCTCATGACAGTAGTTTTGTTAATGGAGACTTAGGGGAACTTGGTTACGTTGCCCCTGAGTACCCGAGCACCATGGTTGCATCTTTGAAGGGGGATGTTTATGGATTTGGTGTTGTGCTTTTGGAGTTGATCACTGGCCAAAAACCTCTAGAAGTCACCAAAGCAGAGGAAGGTTATAAGGGTAACTTAGTGGATTGGGTTAATCAGCTGAGTATGTCGGGTCGAATTAAGGATGTTATTGATAAAGATCTTTGTGGGAAAGGAAACGATGAGGAAATCTTACAATTTCTGAAAATTACAATGAACTGCATTGTTTCTCGGCCCAAAGACAGGTGGTCTATGTATCAGGTTTATCAATCAATGAAAACCATGGCTAAAGACTACAGTTTCCCTGAACCAGATGATGAATTCCCACTTTTACTTGGCAAGGGAGATAATGAACCCATGTTAAAACTTGTTAGAATGTATATCAACTATGCTAAGGAGCCATTGAAAGATCAAAACTGGTGTCTTCTTTCTTCTAAGATCTGCACAAATGCTGCCCTCTTTTTTCTCACCTGGTTGCTAATGTCTACTCATTTTGATATCGACAACTCTTCGAACCCTGTTTTTATATTCAGTTGCTTCTGTATAAATATGTATATGTAG 2025 41.58 MKISNFFLTWVSLNHLLLFLLLLCVSPSFSVVPEDDIRCLRGVKNALVDPLGRLSSWDFKNTSVGHLCNKFVGLSCWNDRENRILSLELKDMKLSGSISEDLQYCVSLQKLDLSGNSFSGSIPPHICEWLPYLVSMDLSNNQFTGPIPADLARCSYLNSLILSDNELSGTIPVELTSLGRLNKFSVANNQLTGTIPSFFDKFGKEDFDGNSDLCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYHSRMNMKRRRGYGDGISGDWADRLRAYKLVQVSLFQKPLVKVKLADLMAATNNFNSENIIVSSRTGTTYRAVLPDGSVLAIKRLNTCKLGEKLFRMEMNRLGSIRHPNLTPLLGFCVVEEEKLLVYKYMSNGTLSSLLHGNDEILDWPTRFRIGLGAARGLAWLHHGCQPPFMHQNICSSVILVDEDYDARIMDFGLARLMASDSHDSSFVNGDLGELGYVAPEYPSTMVASLKGDVYGFGVVLLELITGQKPLEVTKAEEGYKGNLVDWVNQLSMSGRIKDVIDKDLCGKGNDEEILQFLKITMNCIVSRPKDRWSMYQVYQSMKTMAKDYSFPEPDDEFPLLLGKGDNEPMLKLVRMYINYAKEPLKDQNWCLLSSKICTNAALFFLTWLLMSTHFDIDNSSNPVFIFSCFCINMYM 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35672910 35675626 - ClCG09G018530.1 Cla09g01811 281231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01811 674 Gene3D Phosphorylase Kinase; domain 1 269 383 - -
Cla09g01811 674 Pfam Protein tyrosine and serine/threonine kinase 334 577 IPR001245 GO:0004672|GO:0006468
Cla09g01811 674 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Cla09g01811 674 SUPERFAMILY L domain-like 33 208 - -
Cla09g01811 674 SUPERFAMILY Protein kinase-like (PK-like) 286 579 IPR011009 -
Cla09g01811 674 Gene3D Ribonuclease Inhibitor 34 224 IPR032675 -
Cla09g01811 674 ProSiteProfiles Protein kinase domain profile. 309 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g01811 674 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 602 - -
Cla09g01811 674 Gene3D Transferase(Phosphotransferase) domain 1 384 594 - -
Cla09g01811 674 PANTHER RECEPTOR-LIKE PROTEIN 55 16 602 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01205 Cla-Chr9:15035163 Cla09g01811 Cla-Chr9:35672910 1.03E-74 dispersed
Cla09g01811 Cla-Chr9:35672910 Cla05g00864 Cla-Chr5:8569756 3.96E-06 dispersed
Cla09g01811 Cla-Chr9:35672910 Cla11g00478 Cla-Chr11:5471599 3.18E-88 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80823 PF07714 PK_Tyr_Ser-Thr 1.70E-29 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01811 - - csv:101209638 1149.81