Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01824 ATGGAGTTTCTCTTCTTCCTCCTCCTTTCCGTCTTCTCTCATTCCGCCTCCGCCGCTCTCTCCGCCGACTACTACCGGAATTCCTGCCCTGCATTTTCTCAGATCATCCGCGACACTGTCACCAACAAGCAAATCACCACCCCTACCACCGCCGCCGCCACCCTCCGTCTCTTCTTCCACGACTGTCTCCCCAACGGCTGCGACGCCTCCATCCTCATCTCCTCCACCCCCTTCAACGTCGCCGAGCGCAACGCCGACATCAACCTCTCCCTTCCCGGCGACGCCTTCGACGTTGTCGTCCGTGCTAAAACCGCCCTCGAACTCTCTTGCCCCAACACCGTCTCCTGCGCCGACATCCTCACTGCCGCCACTCGCGACCTCCTCACCATGGTTGGCGGCCCTTACTACACCGTCTTCCTCGGCCGCAAAGACGCCAAGGTTTCCAAAGCCTCCGCTATTGAAGGTTCTCTCCCTAGACCCACCATGTCCGTCTCTGAGATCATCAGAATTTTCGCCTCCAGAGGATTTTCCGTTCAGGAAATGGTAGCGTTAAGCGGCGCTCATTCAATTGGCTTCTCGCATTGTAAGGAGTTCGCCTCTGAGATCTTCAATTACAGCAAATCCCCGCCCTACGACAGCCATTACAACCCTCGATTCGCATTAGGGTTACAGCGAGCTTGCGCCGATTACCAGAAGAATCCAACTCTATCGGTTTTTAACGACATTATGACGCCGAACAAATTCGACAACATGTATTTCAAGAATCTGCAGAAAGGGTTAGGCCTTTTGAAGTCCGATGGCGGATTGTACAGCGATCCAAGAACGAGGCCGTGGGTGGAGAAATATGCTGCCGATGAGAGCGTGTTCTTCGGGGCGTTTTCTCAAGCGATGGTGAAGCTTGGTGGCTATGGCGTCAAAGTGGGGAATGAAGGAGAAATCAGACGCAGGTGCGATGCCTTTAATTGA 966 54.45 MEFLFFLLLSVFSHSASAALSADYYRNSCPAFSQIIRDTVTNKQITTPTTAAATLRLFFHDCLPNGCDASILISSTPFNVAERNADINLSLPGDAFDVVVRAKTALELSCPNTVSCADILTAATRDLLTMVGGPYYTVFLGRKDAKVSKASAIEGSLPRPTMSVSEIIRIFASRGFSVQEMVALSGAHSIGFSHCKEFASEIFNYSKSPPYDSHYNPRFALGLQRACADYQKNPTLSVFNDIMTPNKFDNMYFKNLQKGLGLLKSDGGLYSDPRTRPWVEKYAADESVFFGAFSQAMVKLGGYGVKVGNEGEIRRRCDAFN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35882966 35883931 - ClCG09G018650.1 Cla09g01824 281244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01824 321 ProSiteProfiles Plant heme peroxidase family profile. 19 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 Pfam Peroxidase 40 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 Gene3D Peroxidase, domain 2 158 300 - -
Cla09g01824 321 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601|GO:0042744
Cla09g01824 321 SUPERFAMILY Heme-dependent peroxidases 20 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 Gene3D - 23 321 - -
Cla09g01824 321 PANTHER PEROXIDASE 31 3 321 - -
Cla09g01824 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cla09g01824 321 PANTHER - 3 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla09g01824 321 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01824 Cla-Chr9:35882966 Cla11g00913 Cla-Chr11:15495659 7.61E-86 dispersed
Cla01g01394 Cla-Chr1:28330345 Cla09g01824 Cla-Chr9:35882966 1.22E-133 wgd
Cla10g01386 Cla-Chr10:28962334 Cla09g01824 Cla-Chr9:35882966 5.53E-156 wgd
Cla06g01637 Cla-Chr6:29893824 Cla09g01824 Cla-Chr9:35882966 1.48E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01824 K00430 - csv:105435603 554.673