Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01827 ATGGCTCCTAGCTCTGTTGTTGTCACAATTGAGAAGCATAACACCTTCCCTTTAGTGGAAATCAATGCCTCTGACTCTTTGTTGCTTCCTGAGAAACAGAAGGCTGCTAGTCCCAAGCAGCTCACATGGGTTCTTCTTCTCAAAGCTCACAGAGCTCTGTTTTTCTTCTCATGGCTGGCTATGACTGTCAAGACTGTGTTTGCTTCTGTTAAGAAACGCATTGCTCATGCGGATATTAACGAAGAGGATTCCAAAAGCCGAGGGAAATTGTATAGGTTCATTAAGGCTTTTCTTGTTATTTCAATTGCGGGTTTGATCGTTGAAGTTGTTGCCCACTTCAAGAAGTGGAATCTGCGAATGATTCAGCCATTGGAGCTTGAGGTTCATGGGCTTGTTCAATGGTTTTATATTTCCTGGCTTTCGTTTCGAGTTGATTACATTGCTCCACTGGTATTAATACTTTCCAAGTTCTGCATTGTTCTGTTCCTGATCCAATCTCTCGATCGTCTTGTTCTCTGTTTTGGTTGCTTTTGGATCAAGTTCAAGAAAATCAAACCCACGATTCAAGACGACGCTTATGATTTGGAAGATGCTTTAACTTTTCCTATGGTTCTTGTTCAAATTCCAATGTGTAATGAGAGAGAGGTCTATGCACAATCGATTGCTGCTGCTTGTGAGCTTGACTGGCCGAGGAATCGGATTTTGATTCAAGTTCTAGATGATTCAGATGATGGAAATCTTCAGCGTTTGATCAAAGAAGAAGTTCTGTCATGGAATGAAAAGGGTGTTAATATTGTTTATAGACATAGATTGATCCGAACTGGATACAAAGCTGGGAATCTCAAGTCTGCCATGGCTTGTGATTACGTCAAAGATTATGAGTTTGTAGCTATTTTAGATGCAGATTTCCAGCCCAACCCTGATTTCCTTAAACTGACTATCCCTCATTTCAAGCTTTCTTTTTCAACAGTCTCAAATAGAAGCTTACCTTTATTGAACATGTCACAGGGAAATCCTGAGCTGGGTCTTGTTCAAGCTCGTTGGGCGTTTGTAAACAAGGAAGAAAACTTACTTACAAGACTCCAAAACATCAACTTGTGCTTCCACTTTGAAGTGGAGCAGCAAGTTAATGGCGTTTTCCTGAACTTCTTTGGATTCAATGGAACAGCAGGTGTTTGGAGAACGAAAGCACTTGAGGAATCCGGTGGCTGGCTTGAGCGGACGACTGTGGAAGATATGGATATTGCAGTTCGAGCACACTTGAAGGGATGGAAATTCATCTTCCTCAATGATGTCAAGGTGCTTTGTGAATTGCCTGAATCATATGAAGCTTATAAGAAACAGCAACACCGTTGGCATTCTGGTCCAATGCAGCTCTTCAGATTATGCCTCCCTTCAATCATTACTTCAAAGATATCGATATGGAAGAAGACCAACTTGATATTTCTGTTCTTTCTCCTTAGAAAACTCATACTTCCATTCTACTCATTCACTTTGTTTTGCATCATACTTCCATTGACAATGTTTATTCCAGAAGCAGAATTGCCTCTTTGGGTAATCTGCTACATCCCAGTCTTCATGTCCTTACTAAACATTCTTCCATCCCCAAAATCCTTCCCCTTCTTGATCCCATATCTCTTGTTTGAGAACACAATGTCTGTCACAAAGTTCAATGCCATGGTTTCGGGGCTATTCCAGCTGGGAAGTTCATACGAATGGGTTGTGACGAAGAAGACAGGACGATCATCTGAATCCGACTTCTTAGCATTCGCAGAGCGAGAGTCGAAAACATCAAATGAGGAGAAGATTCTGAGGAGACATTCGGAGTCGGGACTCGAGTTGTTGAGTAAATTGAACCAACAAGAGAGGCAAAAGGGTTCAAAGAAGAAGAGAAACAAGGTGTATAGAAAAGAGCTTGCTCTTGCTTTTCTGCTGCTCACTGCATCGGCTAGAAGCTTGCTGTCAGAACATGGAGTTCACTTCTATTTCTTGCTTTTCCAAGGTTTGTCATTCCTGGTGGTGGGTTTGGACTTGATTGGTGAGCAAATGAACTGA 2055 41.65 MAPSSVVVTIEKHNTFPLVEINASDSLLLPEKQKAASPKQLTWVLLLKAHRALFFFSWLAMTVKTVFASVKKRIAHADINEEDSKSRGKLYRFIKAFLVISIAGLIVEVVAHFKKWNLRMIQPLELEVHGLVQWFYISWLSFRVDYIAPLVLILSKFCIVLFLIQSLDRLVLCFGCFWIKFKKIKPTIQDDAYDLEDALTFPMVLVQIPMCNEREVYAQSIAAACELDWPRNRILIQVLDDSDDGNLQRLIKEEVLSWNEKGVNIVYRHRLIRTGYKAGNLKSAMACDYVKDYEFVAILDADFQPNPDFLKLTIPHFKLSFSTVSNRSLPLLNMSQGNPELGLVQARWAFVNKEENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRTKALEESGGWLERTTVEDMDIAVRAHLKGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFMSLLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKTGRSSESDFLAFAERESKTSNEEKILRRHSESGLELLSKLNQQERQKGSKKKRNKVYRKELALAFLLLTASARSLLSEHGVHFYFLLFQGLSFLVVGLDLIGEQMN 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35949451 35951739 + ClCG09G018680.2 Cla09g01827 281247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01827 684 Coils Coil 618 638 - -
Cla09g01827 684 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 3 683 - -
Cla09g01827 684 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 195 439 IPR029044 -
Cla09g01827 684 SUPERFAMILY Nucleotide-diphospho-sugar transferases 204 522 IPR029044 -
Cla09g01827 684 PANTHER - 3 683 - -
Cla09g01827 684 Pfam Glycosyl transferase family group 2 296 519 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01827 Cla-Chr9:35949451 Cla10g01848 Cla-Chr10:34409962 2.13E-129 dispersed
Cla09g01827 Cla-Chr9:35949451 Cla09g01834 Cla-Chr9:36014918 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01827 K20887 - csv:101208151 1232.24