Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla09g01831 | ATGGGATACACGGGAATCAATTACAGCTCTCCAACGCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTTGCCATCATCTTCAGGATGGAGAAAGTGGTATTGAAAAGCAATAGCAGTCAAGCCAAAGTGATGGGCACAATAATATCAATAATAGGTGCATTTGTGGTCACATTTTACAAAGGTCCAAGGATCATGTTCTCTTCAGAGCCCATTTCTCTTTCACTTCATCACCATCCACAACTATCTTCTTCAGATTCTGATTGGATCATTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATTCCCAGAAGAGGCAACAGTGATCTTCTTCTACAACTTAACTGTGGCCATCATAGCTGCAGTTGTAGGTGTGATTTTTGAGACAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCATTGGCCTCTGTTTTATGCTCTGGACTATTTGGATCATGTTTAAATAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCAGTGTTCGTAGCAATGTTTAAGCCGTTATCGATCGTTGTCGCTATCGTAATGGGAGTTCTGTTTCTTGGTGATTCTCTATATCTTGGAAGTCTCATTGGAGCATCCATAATATCCATAGGGTTTTACACTGTAATGTGGGGAAAATCAAAAGAAGAAATGGGTGTTGGAGAAGAAAAAGAAGAAGGCCATAGCTATAATCTTGATGGTAACAAGGAATCAAATGAAGATCAGAGAGTACCTCTTCTTGGAAGCTACAACACACAGAGATACAGTGCAGACCATGTATGA | 852 | 40.73 | MGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVMGTIISIIGAFVVTFYKGPRIMFSSEPISLSLHHHPQLSSSDSDWIIGSLLLTAEYILVPLWYIVQTKIMKEFPEEATVIFFYNLTVAIIAAVVGVIFETDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKSKEEMGVGEEKEEGHSYNLDGNKESNEDQRVPLLGSYNTQRYSADHV | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 35966189 | 35971371 | - | ClCG09G018720.1 | Cla09g01831 | 281251 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla09g01831 | 283 | MobiDBLite | consensus disorder prediction | 245 | 266 | - | - | |
| Cla09g01831 | 283 | MobiDBLite | consensus disorder prediction | 245 | 263 | - | - | |
| Cla09g01831 | 283 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 135 | 238 | - | - | |
| Cla09g01831 | 283 | PANTHER | WAT1-RELATED PROTEIN | 1 | 250 | - | - | |
| Cla09g01831 | 283 | PANTHER | WAT1-RELATED PROTEIN | 1 | 250 | IPR030184 | GO:0016021|GO:0022857 | |
| Cla09g01831 | 283 | Pfam | EamA-like transporter family | 105 | 233 | IPR000620 | GO:0016020|GO:0016021 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla09g01831 | Cla-Chr9:35966189 | Cla09g01838 | Cla-Chr9:36047419 | 5.85E-66 | dispersed | |
| Cla09g01831 | Cla-Chr9:35966189 | Cla09g01836 | Cla-Chr9:36022560 | 0 | proximal | |
| Cla10g01375 | Cla-Chr10:28801454 | Cla09g01831 | Cla-Chr9:35966189 | 1.20E-73 | wgd | |
| Cla05g02523 | Cla-Chr5:36570980 | Cla09g01831 | Cla-Chr9:35966189 | 3.90E-53 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla09g01831 | - | - | csv:101208880 | 470.314 |