Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01867 ATGCAGAATAACGCTGTATTGGCTTTGGCTATGTCTTTTTCCCCTAATTCTATTGCTACGGCTACTGCTATTCCATGCCCTAGCCGAAGCCCTAATTTCCCTCACTTTTCCCACATTCTTCAATTTCGTTCTCAATGTTCCATCTCATGGCGTTCTTCTTCATCCATCTCTCTTTTTTCTTCTCGATTTACTCCGAGGTTTCAGAAATTTGCCATAATGGCTGCTTCTGTGCCGGAGAGTGCCGGCGAGGCTGTGGAATCCGCTGATTTCGTTCATAATCTCCGGCTTGGTGCAATGTTTGGGGTTTGGTACCTTTTGAATATCTACTACAATATTTTCAACAAACAGGTTCTGAAAGCCTTTCCCTTTCCAACTACGGTCACAGCTTTCCAGTTCGGCTGTGGTACGGTCATAGTAAACTTAATGTGGGCTCTTCATTTTCACCATAGACCCAAGATCAATCGATCCCAGTTTGCTGCCATTCTTCCGCTGGCTGTAGCGCACACACTGGGAAACATATTAACCAATGTGAGTCTTGGGAGAGTTGCGGTTTCATTCACTCACACCATCAAAGCAATGGAGCCATTTTTCACTGTCCTTCTCTCTGCTTTGTTTTTGGCTGAGAGGCCCACATTTTGGGTTGTTTTTTCTCTGGTACCCGTTGTAGGAGGAGTGGCACTTGCTTCTTTCACTGAAGCCTCATTTAATTGGATTGGCTTCAGCAGTGCCATGGCTTCCAATCTTACCAATCAATCACGTAATATCTTCAGCAAAAAGTTCATGGTCCACAAAGAGGCATTGGACAATATCAATCTCTTCTCTGTACTTACTATCATTTCGTTTATCCTGTTGGTTCCCTCGGCCCTTCTCCTTGAAGGCAGTAAACTTAGTCCTTCATACCTGCAATTAGCGGCAAATCAAGGGTTGAATATTAGGGAGCTATGCATTAGGTTGCTTCTATCTGGCATCTGTTTCCATAGTTATCAGCAGGTTTCTTATTCAATACTACAGGAAATTTCACCAGTGAGCCATGCAGTAGGAAATTCTTTGAAGCGTGTGGTGGTTATAGGGTCCTCCGTTATTTTCTTCCAAACAGCAGTTTCACCTCTAAACGCCCTAGGAACTGGCATAGCTCTTGTGGGAGTTTTCTTGTATTCAAGGGCAAAGCGTATGAAGCCAAAGCTTAAGTCTTTGTAA 1197 43.78 MQNNAVLALAMSFSPNSIATATAIPCPSRSPNFPHFSHILQFRSQCSISWRSSSSISLFSSRFTPRFQKFAIMAASVPESAGEAVESADFVHNLRLGAMFGVWYLLNIYYNIFNKQVLKAFPFPTTVTAFQFGCGTVIVNLMWALHFHHRPKINRSQFAAILPLAVAHTLGNILTNVSLGRVAVSFTHTIKAMEPFFTVLLSALFLAERPTFWVVFSLVPVVGGVALASFTEASFNWIGFSSAMASNLTNQSRNIFSKKFMVHKEALDNINLFSVLTIISFILLVPSALLLEGSKLSPSYLQLAANQGLNIRELCIRLLLSGICFHSYQQVSYSILQEISPVSHAVGNSLKRVVVIGSSVIFFQTAVSPLNALGTGIALVGVFLYSRAKRMKPKLKSL 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36382530 36389936 - ClCG09G019120.2 Cla09g01867 281287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01867 398 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 94 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cla09g01867 398 Pfam Triose-phosphate Transporter family 94 386 IPR004853 -
Cla09g01867 398 PANTHER SOLUTE CARRIER FAMILY 35 41 392 - -
Cla09g01867 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 231 - -
Cla09g01867 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 311 391 - -
Cla09g01867 398 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 41 392 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00261 Cla-Chr5:2381406 Cla09g01867 Cla-Chr9:36382530 5.86E-79 dispersed
Cla05g02395 Cla-Chr5:35508534 Cla09g01867 Cla-Chr9:36382530 1.05E-64 dispersed
Cla09g01867 Cla-Chr9:36382530 Cla10g00522 Cla-Chr10:6894821 1.95E-64 dispersed
Cla01g01303 Cla-Chr1:26380826 Cla09g01867 Cla-Chr9:36382530 4.81E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01867 K15283 - csv:101217436 672.544