Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g01885 | ATGGGGTCCGGTAATGGGTTATGTTCAAAAGAGTTTGATTTGGATGCTAAGTGGCTGGTTGATCCGAAGCAAATCTTTGTTGGGCCAAGGATTGGGGAGGGCGCGCATGGCAAAGTGCACAAGGGGAAATATAAAGACCAAAATGTTGCAATTAAAATAATTCGGAAAGGTGAAACCCCAGAAGATATTGCCAAAACTGAGGCACGCTTTGCTCGGGAGGTTGCTATGTTATCCAGAGTTCAACACAAGAATCTTGCGAAGTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTGACTGAGCTTCTTTTAGGCGGTACATTAAGGAAGTACCTGTTGAGTATAAGGCCAAGGTGCTTGGACTTCAATGAGGCAGTTGGCTTTGCACTTGATATTGCACGTGCAATGGAATGCTTGCATTCGCATGGCATCATTCACCGTGACCTCAAGCCTGAGAATTTGATCTTGACTGCAGACCACAAAACCGTTAAACTTGCTGATTTTGGTCTTGCTAGAGAAGAGTCGGTAACAGAGATGATGACGGCTGAAACTGGGACTTACAGATGGATGGCTCCGGAGCTATACAGTACAGTAACTTTACGAAATGGAGAGAAGAAGCATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATTGTATTCTGGGAGATTATCCGAAATAAGTTGCCTTTCGAAGGCATGTCAAATCTACAAGCAGCATATGCAGCTGCTTTTAAGAATTTACGACCGACTGCTGAGAACCTCCCACCGGATTTAGCACCTATTGTGACTTCCTGTTGGACAGAGGACCCAAACGATCGGCCTAACTTCAACCAAATCATACAAATGCTCTTGAAATGTCTATCCACCATTCCACAACCAGAGTATGTTGCACCACCACCATTGATGCACCCACCTGAGAATGCAGTTTTGCCACCAGAGTCTCCTGGAACAAGTTCTTTGATGGCAGCCACAAGACATGGCACGAGGGAAGTCCTGAACAGCGAGATGGAAGAGAAACCGAGTAGTTTCTTCTCGTGTTTCACTGCTCAGCTCTTGAAGAATATGGCAAGGTCTTGGATAATCGATAGTCGAACAATTGCAAGAAAAGTCAGGAACATCAGTCAATCTTCTTCACAAGTAATTAAAGATTGTGATGCGAAACGAGAATGTCCAAACTGTCACTTTATTATTGATAATACAGATGTTTCTCCTGAATGGCCTGGATTGCCTGCAGGAGTAAAGTTTGATCCAACTGATGAAGAAATAATGGAGCACTTAGCAGCCAAGTGCACTGTCGGAAACTTAAAGCCACATGCATTAATTGATGAATTCATTCCCACACTTGAAACAGACCAAGGAATCTGTTACACGCATCCAGAAAATCTCCCCGGTAATAACATTTTCCATTATTCAGGTGTTAGTAAAGATGGAAATGATGTCCATTTCTTCCATAAAACAAGCAATGCATATTCCACGGGTCAAAGGAAGCGTCGCAAGATTGAAAGTGAACATAATTCAAGCCTCGAACATTTTCGCTGGCACAAGACAGGTAAGACCAAGGCTGTGATAGAAAATGGTGTTCATAAGGGATGGAAGAAGATCTTCTCTCTGTATAGAAGTTCGAAGGGAGGCTCGAAGCCCCAAAAGTCTAATTGGGTGATACATCAATATCATTTGGGAACTGAAGAAGATGAGAAGGAAGGTGAATACGTTTTATCAAAGATTTCTTATCAGCAGCCAAAGCAATGTATTAAGAGTAGTGATAATATGCTCATTGTGGATTTTGATGCTATGCTGCATCAAACAAGTCCAAGAACTCCCAAGTCGAATCCTCCGATTCCACCTCGATCAGGAAAATCACTTGTCTCCAATGCTGTTGCTGACAACAGTCTGCCTCAGTCATTTGCAAAGGAAGAAGAGTCAACTCCGGAGGCATCTCGTGTTTCTTATCCAAATATTTCATCAGAGAACGACACAGGATACCATGATTGGTTGGCCGGAGAATCTCAGGATATAGATGATGTTGGATTACATTACTTGGAAGACAACTTATTGTGCAATGAAGTCCTAGATTCTAGTGCTTTTATAAGTAACAACCAAGTAAATCAAATGCCTTTCCCTCTCTCTGGTACCAACGCCTACCACGAGATTGCAAACGACAACGTTCCATGTGGAATTGCAGACCTTGTGAACCTTGAACTAGATACTCCACCTGATTTTCATCTGGCTAGAGCATTTTCGACTGGATCGATAGGATATGAACTGAATGTTGAAGCAAATTCTAATGAGAATGACATGTTACAATCTGACTTTTCTGCCCCCGAATCTTCCTTGAATTCACCATCTTTCATCATAAAACTCTTTGCAATCATTTGGCTTTCATTTGTATGGGGAATGCCATGCATGTCGCCTGTTGGAAGTCGGTTAAACTTCAAAATTCGAATGACACGTAACAACTTACGAACATATCTATCAGTTGTTTCTCACGGTCAAGTCATCGAATCAAGAACAACCGCAACGGATCCAGTGATGAAGCTAGTTTTTGCTCAAATTTTGTGTTAA | 2568 | 42.17 | MGSGNGLCSKEFDLDAKWLVDPKQIFVGPRIGEGAHGKVHKGKYKDQNVAIKIIRKGETPEDIAKTEARFAREVAMLSRVQHKNLAKFIGACKEPIMVIVTELLLGGTLRKYLLSIRPRCLDFNEAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIIRNKLPFEGMSNLQAAYAAAFKNLRPTAENLPPDLAPIVTSCWTEDPNDRPNFNQIIQMLLKCLSTIPQPEYVAPPPLMHPPENAVLPPESPGTSSLMAATRHGTREVLNSEMEEKPSSFFSCFTAQLLKNMARSWIIDSRTIARKVRNISQSSSQVIKDCDAKRECPNCHFIIDNTDVSPEWPGLPAGVKFDPTDEEIMEHLAAKCTVGNLKPHALIDEFIPTLETDQGICYTHPENLPGNNIFHYSGVSKDGNDVHFFHKTSNAYSTGQRKRRKIESEHNSSLEHFRWHKTGKTKAVIENGVHKGWKKIFSLYRSSKGGSKPQKSNWVIHQYHLGTEEDEKEGEYVLSKISYQQPKQCIKSSDNMLIVDFDAMLHQTSPRTPKSNPPIPPRSGKSLVSNAVADNSLPQSFAKEEESTPEASRVSYPNISSENDTGYHDWLAGESQDIDDVGLHYLEDNLLCNEVLDSSAFISNNQVNQMPFPLSGTNAYHEIANDNVPCGIADLVNLELDTPPDFHLARAFSTGSIGYELNVEANSNENDMLQSDFSAPESSLNSPSFIIKLFAIIWLSFVWGMPCMSPVGSRLNFKIRMTRNNLRTYLSVVSHGQVIESRTTATDPVMKLVFAQILC | 855 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 36549776 | 36562533 | + | ClCG09G019310.2 | Cla09g01885 | 281305 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g01885 | 855 | MobiDBLite | consensus disorder prediction | 635 | 656 | - | - | |
Cla09g01885 | 855 | ProSiteProfiles | Protein kinase domain profile. | 25 | 297 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g01885 | 855 | SUPERFAMILY | NAC domain | 397 | 580 | IPR036093 | GO:0003677|GO:0006355 | |
Cla09g01885 | 855 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 319 | IPR011009 | - | |
Cla09g01885 | 855 | Gene3D | NAC domain | 420 | 585 | IPR036093 | GO:0003677|GO:0006355 | |
Cla09g01885 | 855 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672|GO:0006468 | |
Cla09g01885 | 855 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 104 | - | - | |
Cla09g01885 | 855 | MobiDBLite | consensus disorder prediction | 603 | 623 | - | - | |
Cla09g01885 | 855 | CDD | STKc_MAP3K-like | 31 | 285 | - | - | |
Cla09g01885 | 855 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 56 | IPR017441 | GO:0005524 | |
Cla09g01885 | 855 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1 | 329 | - | - | |
Cla09g01885 | 855 | SMART | serkin_6 | 25 | 292 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla09g01885 | 855 | ProSiteProfiles | NAC domain profile. | 411 | 580 | IPR003441 | GO:0003677|GO:0006355 | |
Cla09g01885 | 855 | Pfam | No apical meristem (NAM) protein | 412 | 561 | IPR003441 | GO:0003677|GO:0006355 | |
Cla09g01885 | 855 | PANTHER | BNAA06G32000D PROTEIN | 1 | 329 | - | - | |
Cla09g01885 | 855 | PRINTS | Tyrosine kinase catalytic domain signature | 256 | 278 | IPR001245 | GO:0004672|GO:0006468 | |
Cla09g01885 | 855 | PRINTS | Tyrosine kinase catalytic domain signature | 213 | 235 | IPR001245 | GO:0004672|GO:0006468 | |
Cla09g01885 | 855 | PRINTS | Tyrosine kinase catalytic domain signature | 101 | 114 | IPR001245 | GO:0004672|GO:0006468 | |
Cla09g01885 | 855 | PRINTS | Tyrosine kinase catalytic domain signature | 139 | 157 | IPR001245 | GO:0004672|GO:0006468 | |
Cla09g01885 | 855 | Gene3D | Transferase(Phosphotransferase) domain 1 | 106 | 296 | - | - | |
Cla09g01885 | 855 | Pfam | Protein tyrosine and serine/threonine kinase | 29 | 285 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01888 | Cla-Chr1:33686062 | Cla09g01885 | Cla-Chr9:36549776 | 3.49E-80 | dispersed | |
Cla09g01885 | Cla-Chr9:36549776 | Cla10g02141 | Cla-Chr10:37063622 | 8.34E-08 | dispersed | |
Cla11g00177 | Cla-Chr11:2109310 | Cla09g01885 | Cla-Chr9:36549776 | 5.87E-62 | dispersed | |
Cla05g02330 | Cla-Chr5:34897215 | Cla09g01885 | Cla-Chr9:36549776 | 3.27E-78 | transposed | |
Cla10g01313 | Cla-Chr10:28072770 | Cla09g01885 | Cla-Chr9:36549776 | 0 | wgd | |
Cla06g01701 | Cla-Chr6:30598998 | Cla09g01885 | Cla-Chr9:36549776 | 2.93E-171 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61778 | PF07714 | PK_Tyr_Ser-Thr | 2.70E-57 | CL0016 | Cla | TF | |
80826 | PF07714 | PK_Tyr_Ser-Thr | 2.70E-57 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g01885 | - | - | csv:101216003 | 697.967 |