Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01941 ATGGCGGGAAAGGGAGAGGGTCCGGCCATCGGTATCGATCTCGGTACCACTTACTCTTGTGTTGGAGTTTGGCAGCATGATCGTGTTGAGATTATTGCCAATGATCAAGGAAATCGAACGACGCCGTCGTATGTTGCTTTCACTGATACCGAACGACTCATCGGCGACGCTGCCAAGAACCAAGTCGCTATGAATCCTCTCAACACCGTCTTCGCCGTGGCTTTCTTTCTTGCGAATTTCCGAATCGGAATTACTGGTTATGATTGTCTCTGGTCCATAATTGACGCTGGATTTTTTGAATTGTCGACTGCCTCTGGAGTTGCGTCGAATTCTCGTCGAGTTAGTCGTTGTTGTTCATATCATTGTGTTGTGTTTACTAGACTGCGTAATTCTAACTATCATTTACGATCGACAGATGCGAAGCGGTTGATTGGAAGGAGATTCTCCGATCCCTCGGTCCAGAGCGACATGAAATTGTGGCCATTCAAGGTCATTGCCGGTCCGGGGGACAAACCTATGATTGTCGTCAATTACAAAGGCGAAGAGAAGCAATTCGCCGCTGAAGAAATCTCATCCATGGTCCTTACGAAAATGCGTGAGATAGCAGAAGCTTACCTCGGTACCTCCGTGAAGAACGCCGTCGTCACCGTTCCTGCTTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGACGCCGGAGTCATTGCCGGTCTTAATGTCATGCGGATCATCAACGAGCCTACAGCTGCTGCTATTGCTTATGGACTCGATAAAAAGGCGAGCAGTGTTGGCGAGAAGAATGTTCTGATTTTTGATCTGGGTGGAGGAACGTTTGATGTCTCTCTCCTCACAATTGAGGAAGGCATTTTCGAGGTGAAGGCAACTGCCGGTGACACCCATCTCGGCGGTGAGGATTTCGACAACAGATTGGTTAACCATTTTGTTCAAGAATTCAAGAGGAAGCATAAGAAAGACATCAGTGGAAATCCAAGGGCTCTCAGGAGATTGAGGACTGCTTGTGAAAGAGCCAAGAGAACCCTCTCATCCACTGCCCAAACTACAATCGAAATCGATTCTTTGTATGAAGGAATTGATTTCTACACAACCATTACTCGAGCTAGATTCGAAGAGCTCAACATGGACCTGTTTCGAAAGTGTATGGAGCCAGTTGAGAAGTGTTTGAGAGATGCAAAGATGGACAAAAGCAGCGTCCATGATGTTGTCCTTGTTGGTGGTTCTACAAGAATTCCCAAAGTGCAGCAGCTATTGCAAGATTTCTTCAATGGCAAGGAACTTTGCAAGAGTATCAATCCTGATGAAGCAGTTGCTTATGGAGCTGCTGTCCAAGCCGCCATCTTGAGTGGTGAAGGAAACGAGAAAGTGCAAGACCTTCTTCTCTTGGATGTTACTCCTCTATCACTTGGTTTGGAAACTGCAGGAGGTGTAATGACTGTTCTAATCCCAAGGAACACGACCATTCCCACCAAGAAGGAACAAGTGTTCTCTACTTATTCGGATAACCAACCTGGTGTTCTTATTCAAGTCTACGAGGGTGAAAGGACAAGAACAAAAGATAACAATTTATTGGGCAAGTTTGAACTTTCTGGCATCCCTCCTGCTCCAAGAGGTGTTCCTCAGATCACTGTCTGCTTCGACATTGACGCCAACGGTATTCTAAACGTATCTGCAGAGGATAAAACTACAGGACAGAAGAACAAGATCACCATTACCAACGACAAAGGAAGGTTGTCCAAAGAAGAGATTGAGAAATTGGTTCAGGAAGCAGAGAAATTCAAGGCTGAGGATGAAGAACACAAGAAGAAAGTTGAATCAAAGAATGCTTTAGAAAACTATGCTTACAACATGAGGAATACCATCAAAGATGAAAAGATCGGTGGTAAACTTGCCCCAGCTGACAAGAAGAAGATCGAGGATGCAGTTGAACAGGCTATTCAGTGGCTAGATAGCAACCAGCTGGCTGAGTCGGATGAGTTTGATGACAAGATGAAGGAACTTGAGTCGATTTGCAACCCCATCATAGCCAAGATGTACCAAGGCGGTGCCGACATGGGTGGTGCGGCCATGGATGATGATGCTCCTCCTTCTGGTGGCAGTGGCGCTGGTCCTAAGATTGAAGAAGTCGATTAA 2148 46.14 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPLNTVFAVAFFLANFRIGITGYDCLWSIIDAGFFELSTASGVASNSRRVSRCCSYHCVVFTRLRNSNYHLRSTDAKRLIGRRFSDPSVQSDMKLWPFKVIAGPGDKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGTSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKKKVESKNALENYAYNMRNTIKDEKIGGKLAPADKKKIEDAVEQAIQWLDSNQLAESDEFDDKMKELESICNPIIAKMYQGGADMGGAAMDDDAPPSGGSGAGPKIEEVD 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37014502 37017153 + ClCG09G019940.1 Cla09g01941 281361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01941 715 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cla09g01941 715 ProSitePatterns Heat shock hsp70 proteins family signature 3. 407 421 IPR018181 -
Cla09g01941 715 Gene3D - 138 193 - -
Cla09g01941 715 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 138 695 - -
Cla09g01941 715 CDD HSPA1-2_6-8-like_NBD 9 454 - -
Cla09g01941 715 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 458 612 IPR029047 -
Cla09g01941 715 SUPERFAMILY Actin-like ATPase domain 9 255 IPR043129 -
Cla09g01941 715 Gene3D - 613 686 IPR029048 -
Cla09g01941 715 SUPERFAMILY Actin-like ATPase domain 265 455 IPR043129 -
Cla09g01941 715 ProSitePatterns Heat shock hsp70 proteins family signature 2. 270 283 IPR018181 -
Cla09g01941 715 PANTHER HEAT SHOCK PROTEIN 70KDA 138 695 IPR013126 GO:0005524|GO:0140662
Cla09g01941 715 PANTHER HEAT SHOCK PROTEIN 70KDA 1 73 IPR013126 GO:0005524|GO:0140662
Cla09g01941 715 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 459 616 IPR029047 -
Cla09g01941 715 Gene3D - 259 433 - -
Cla09g01941 715 Gene3D Actin; Chain A, domain 4 302 385 - -
Cla09g01941 715 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 610 690 IPR029048 -
Cla09g01941 715 Gene3D - 137 451 - -
Cla09g01941 715 PRINTS 70kDa heat shock protein signature 8 21 - -
Cla09g01941 715 PRINTS 70kDa heat shock protein signature 36 48 - -
Cla09g01941 715 PRINTS 70kDa heat shock protein signature 463 482 - -
Cla09g01941 715 PRINTS 70kDa heat shock protein signature 544 560 - -
Cla09g01941 715 Coils Coil 581 608 - -
Cla09g01941 715 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 73 - -
Cla09g01941 715 MobiDBLite consensus disorder prediction 688 715 - -
Cla09g01941 715 Pfam Hsp70 protein 9 73 IPR013126 GO:0005524|GO:0140662
Cla09g01941 715 Pfam Hsp70 protein 138 685 IPR013126 GO:0005524|GO:0140662
Cla09g01941 715 Gene3D - 2 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01941 Cla-Chr9:37014502 Cla11g01102 Cla-Chr11:22417393 1.26E-33 dispersed
Cla09g01941 Cla-Chr9:37014502 Cla09g01948 Cla-Chr9:37053583 1.08E-39 proximal
Cla04g00820 Cla-Chr4:23247541 Cla09g01941 Cla-Chr9:37014502 1.12E-39 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01941 K03283 - csv:101211905 1085.09