Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01946 ATGGAATTTGCCGACGAGCTCACGGCCGGAGCCACCGCCTCCAATTCCAACCGCCACAAGCCCTCCGATACTAGAGACAGCGGCGAGCTCTCATCTTCCGACAACGACACCGAAGATGTATTTTCTTCCTCCTCCTCGTTCCTTTTTTCGCTTTCCATTCTTAAATTTCTTGCATCTCATTTCGTCTTCTCTGCTTCCAATCCTCTCGAACGGAAAGCTAATAGCATCGCCTTCTTTATTGCTCTGGTTTTACGGAAACGGAGGCTTCCTGAGCTAGATATGTTGCTCGACTGGAGCTCCACGACATGGACACGATTGGTCTGCCATTTTCTAGTTGTAATACTTAATATGATTGCTGCATTTGAGGTTAGAACGTTTGGCGTCCATATTCTCCAGCTCCCACAAAGCTTGTTCCTGGAATTTTCTTTGACCTCTATGGACATTTGCACCCGAACTGGTGCACCTGAAGGAGAGAAGTATATGGATGATAAATTGGAGACAATACAAAATATATGTCAGAAAATTGTGGACACCACAAACTTGTACTCATTTTCTAAATTGGATGACCAGCAAGTATATTCTCTTATGAGGCTGAGGGAAATTTCTCATCGGATTATCAATGACCGTGATTCAAGGGTGACAAGAAATGATGTGATTAGTGCTATGTGTTTTTACATCAACAGGCTGGCAGGTAAGTGCAAGGATATTGTTGACATTTTGAATAAGATGTCATATAAAGACTTGGATGACCAGCAAATGCAACAGCTATTGAGATTGAAAGAGCTCCTATGTGGGATTGTAGATGGAGCTAAAGACGTGGAAACTGAACCTTCCCATATTGTTGAACAGGGCATGGTAAGTGATATGTGGACGACTGAGAGTTTGGAGGTTGAGCCACTTGATTCCTGCAATGATGATGTACCACTTGGAGAGACACAAATTGTAATGGTTGAAGATGAACAGGCAGTAGCTGAAGTTAGGCTTGAGAATCAATATTGTGACCCACATGTTAAACACTCAGTCAGTTGGCCAAAAAATGGTAGCTTAACCTTAGAGTGGGTTGTCGAGATGATGAAAACTCTCGAGCTGTCTTCAAGAAACTACTCACCTGCGGAGTTTCAACTTATCATGCCAGTTTCTGTGGTAGATTCAATACTTGATGTAGCTGCGAGTATCCTTCACAAGGAACCAAACTGCGTGGAAGTTGACTGCCATGGAGAAGTTTCAAAAGTGGTTATAGTTGGGGACATTCATGGACATTATCATGACTTACTTCATCTATTTGAACTTGCTAATTTGCCATCTAAAAGCCAGTATTTCGTTTTTAATGGTAATTATGTGGACAGAGGAGCATGGGGACTTGAGGTGTTTTTGGTCTTATTGGCATGGAAGATCTTGATGCCTGATAGAGTATATATGCTCCGTGGAAATCATGAAACCCGAAGTTGTACATCATCCTACGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAAAGTATATCACAGGTGCTTGGAAACGTTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGTATATACAACACATGGAGGGTTATTTCGTAAACCATGCAATCCTGATGTGCAGAATGACAAGGAAAGGAAAACGCAGAAGCTGGAGATTGGATCCTTGCAAGACTTATCTAAGCTTGAAAGGTTTTTTATTGACATTCCAACTGAAGATGAAGATCCAAATATAGTTTTGGCAGATGTATTGTGGTCGGATCCTTCTAAGGTAGATGGTTTAAGGGAAAATCAAGCCAGAGGAGCGGGCCTACTGTGGGGTCCTGATTCTACTGAAGCATTCTTAAAGCTGTCCAATTTAAAGTTGATCATTAGGTCACATGAAGGCCCAGATTCAAGGGACGGTAAGATTGATTTTGATGATATGATAATGGGTTATAGCACAGATCACGACATAGAATCAGGGAAATTATATACTCTATTTAGCGCTCCAGATTTCCCTCAGTTTGGTCAGAAGAGTTATAATAATGAGGGAGCATATGCTACTTTGAAGTATCCAGATTTTGAAACTCCATCTTTCCATACATTTAAAGCTGTAGATAAACCGAAGGTTCATGAACTTCAAAGTACAATACTGCATGCTAGGATAGACGTTTGCTATTTTGGTTGTGAAGGACATGATGTAGATTTAGATTTGACATTAATGGCTCTAGCTGATGCTGTCTCTTCTAACAACTCTAGTCCTATTGAGATTCATTCTGGGGTTGATTTTGAGGCATTAGGCATATTAAACCCACCTTCTTGGAGCATTACATTGACAGATGATACTACAGGTACCCAAAATGTTCAGATTCCGAAGGCTCCCATGGTAGAAGGGCTGCCTTTGCCGCCTAGCATAGAGGAACCTCATAAGGCTGCTTATGAATACTTCTTGGAGCTCATTGCAGGACTGAAATTTATGCTCCAGACAACGGAAAACATCTCTGATAAGGAGGGAATGAATGAATTGACATGGGGAGATGATTTAAGAGTTTGCAGCTCCATTTATGTCCTCTCCGCACTCGTTTCGTGGCTCAGTTTTAGCGATCTTCCTCGTTGTAATGTCGAAGGATGA 2616 41.55 MEFADELTAGATASNSNRHKPSDTRDSGELSSSDNDTEDVFSSSSSFLFSLSILKFLASHFVFSASNPLERKANSIAFFIALVLRKRRLPELDMLLDWSSTTWTRLVCHFLVVILNMIAAFEVRTFGVHILQLPQSLFLEFSLTSMDICTRTGAPEGEKYMDDKLETIQNICQKIVDTTNLYSFSKLDDQQVYSLMRLREISHRIINDRDSRVTRNDVISAMCFYINRLAGKCKDIVDILNKMSYKDLDDQQMQQLLRLKELLCGIVDGAKDVETEPSHIVEQGMVSDMWTTESLEVEPLDSCNDDVPLGETQIVMVEDEQAVAEVRLENQYCDPHVKHSVSWPKNGSLTLEWVVEMMKTLELSSRNYSPAEFQLIMPVSVVDSILDVAASILHKEPNCVEVDCHGEVSKVVIVGDIHGHYHDLLHLFELANLPSKSQYFVFNGNYVDRGAWGLEVFLVLLAWKILMPDRVYMLRGNHETRSCTSSYGFEKEVRTKYGEQGEKVYHRCLETFKELPLAAIIAGKVYTTHGGLFRKPCNPDVQNDKERKTQKLEIGSLQDLSKLERFFIDIPTEDEDPNIVLADVLWSDPSKVDGLRENQARGAGLLWGPDSTEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSTDHDIESGKLYTLFSAPDFPQFGQKSYNNEGAYATLKYPDFETPSFHTFKAVDKPKVHELQSTILHARIDVCYFGCEGHDVDLDLTLMALADAVSSNNSSPIEIHSGVDFEALGILNPPSWSITLTDDTTGTQNVQIPKAPMVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTTENISDKEGMNELTWGDDLRVCSSIYVLSALVSWLSFSDLPRCNVEG 871
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37044124 37052596 + ClCG09G019990.2 Cla09g01946 281366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01946 871 MobiDBLite consensus disorder prediction 1 35 - -
Cla09g01946 871 SMART pp2a_7 377 701 IPR006186 GO:0016787
Cla09g01946 871 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 164 829 - -
Cla09g01946 871 ProSitePatterns Serine/threonine specific protein phosphatases signature. 474 479 IPR006186 GO:0016787
Cla09g01946 871 PRINTS Serine/threonine phosphatase family signature 563 590 IPR006186 GO:0016787
Cla09g01946 871 PRINTS Serine/threonine phosphatase family signature 410 437 IPR006186 GO:0016787
Cla09g01946 871 PRINTS Serine/threonine phosphatase family signature 510 536 IPR006186 GO:0016787
Cla09g01946 871 PRINTS Serine/threonine phosphatase family signature 440 467 IPR006186 GO:0016787
Cla09g01946 871 PRINTS Serine/threonine phosphatase family signature 473 497 IPR006186 GO:0016787
Cla09g01946 871 PRINTS Serine/threonine phosphatase family signature 657 673 IPR006186 GO:0016787
Cla09g01946 871 Gene3D - 309 714 IPR029052 -
Cla09g01946 871 Pfam Calcineurin-like phosphoesterase 410 631 IPR004843 GO:0016787
Cla09g01946 871 SUPERFAMILY Metallo-dependent phosphatases 365 709 IPR029052 -
Cla09g01946 871 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 164 829 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01946 Cla-Chr9:37044124 Cla10g00009 Cla-Chr10:193462 1.32E-134 dispersed
Cla09g01946 Cla-Chr9:37044124 Cla02g01790 Cla-Chr2:32917161 6.85E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01946 K04460 - csv:101211172 1249.19