Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g01946 | ATGGAATTTGCCGACGAGCTCACGGCCGGAGCCACCGCCTCCAATTCCAACCGCCACAAGCCCTCCGATACTAGAGACAGCGGCGAGCTCTCATCTTCCGACAACGACACCGAAGATGTATTTTCTTCCTCCTCCTCGTTCCTTTTTTCGCTTTCCATTCTTAAATTTCTTGCATCTCATTTCGTCTTCTCTGCTTCCAATCCTCTCGAACGGAAAGCTAATAGCATCGCCTTCTTTATTGCTCTGGTTTTACGGAAACGGAGGCTTCCTGAGCTAGATATGTTGCTCGACTGGAGCTCCACGACATGGACACGATTGGTCTGCCATTTTCTAGTTGTAATACTTAATATGATTGCTGCATTTGAGGTTAGAACGTTTGGCGTCCATATTCTCCAGCTCCCACAAAGCTTGTTCCTGGAATTTTCTTTGACCTCTATGGACATTTGCACCCGAACTGGTGCACCTGAAGGAGAGAAGTATATGGATGATAAATTGGAGACAATACAAAATATATGTCAGAAAATTGTGGACACCACAAACTTGTACTCATTTTCTAAATTGGATGACCAGCAAGTATATTCTCTTATGAGGCTGAGGGAAATTTCTCATCGGATTATCAATGACCGTGATTCAAGGGTGACAAGAAATGATGTGATTAGTGCTATGTGTTTTTACATCAACAGGCTGGCAGGTAAGTGCAAGGATATTGTTGACATTTTGAATAAGATGTCATATAAAGACTTGGATGACCAGCAAATGCAACAGCTATTGAGATTGAAAGAGCTCCTATGTGGGATTGTAGATGGAGCTAAAGACGTGGAAACTGAACCTTCCCATATTGTTGAACAGGGCATGGTAAGTGATATGTGGACGACTGAGAGTTTGGAGGTTGAGCCACTTGATTCCTGCAATGATGATGTACCACTTGGAGAGACACAAATTGTAATGGTTGAAGATGAACAGGCAGTAGCTGAAGTTAGGCTTGAGAATCAATATTGTGACCCACATGTTAAACACTCAGTCAGTTGGCCAAAAAATGGTAGCTTAACCTTAGAGTGGGTTGTCGAGATGATGAAAACTCTCGAGCTGTCTTCAAGAAACTACTCACCTGCGGAGTTTCAACTTATCATGCCAGTTTCTGTGGTAGATTCAATACTTGATGTAGCTGCGAGTATCCTTCACAAGGAACCAAACTGCGTGGAAGTTGACTGCCATGGAGAAGTTTCAAAAGTGGTTATAGTTGGGGACATTCATGGACATTATCATGACTTACTTCATCTATTTGAACTTGCTAATTTGCCATCTAAAAGCCAGTATTTCGTTTTTAATGGTAATTATGTGGACAGAGGAGCATGGGGACTTGAGGTGTTTTTGGTCTTATTGGCATGGAAGATCTTGATGCCTGATAGAGTATATATGCTCCGTGGAAATCATGAAACCCGAAGTTGTACATCATCCTACGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAAAGTATATCACAGGTGCTTGGAAACGTTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGTATATACAACACATGGAGGGTTATTTCGTAAACCATGCAATCCTGATGTGCAGAATGACAAGGAAAGGAAAACGCAGAAGCTGGAGATTGGATCCTTGCAAGACTTATCTAAGCTTGAAAGGTTTTTTATTGACATTCCAACTGAAGATGAAGATCCAAATATAGTTTTGGCAGATGTATTGTGGTCGGATCCTTCTAAGGTAGATGGTTTAAGGGAAAATCAAGCCAGAGGAGCGGGCCTACTGTGGGGTCCTGATTCTACTGAAGCATTCTTAAAGCTGTCCAATTTAAAGTTGATCATTAGGTCACATGAAGGCCCAGATTCAAGGGACGGTAAGATTGATTTTGATGATATGATAATGGGTTATAGCACAGATCACGACATAGAATCAGGGAAATTATATACTCTATTTAGCGCTCCAGATTTCCCTCAGTTTGGTCAGAAGAGTTATAATAATGAGGGAGCATATGCTACTTTGAAGTATCCAGATTTTGAAACTCCATCTTTCCATACATTTAAAGCTGTAGATAAACCGAAGGTTCATGAACTTCAAAGTACAATACTGCATGCTAGGATAGACGTTTGCTATTTTGGTTGTGAAGGACATGATGTAGATTTAGATTTGACATTAATGGCTCTAGCTGATGCTGTCTCTTCTAACAACTCTAGTCCTATTGAGATTCATTCTGGGGTTGATTTTGAGGCATTAGGCATATTAAACCCACCTTCTTGGAGCATTACATTGACAGATGATACTACAGGTACCCAAAATGTTCAGATTCCGAAGGCTCCCATGGTAGAAGGGCTGCCTTTGCCGCCTAGCATAGAGGAACCTCATAAGGCTGCTTATGAATACTTCTTGGAGCTCATTGCAGGACTGAAATTTATGCTCCAGACAACGGAAAACATCTCTGATAAGGAGGGAATGAATGAATTGACATGGGGAGATGATTTAAGAGTTTGCAGCTCCATTTATGTCCTCTCCGCACTCGTTTCGTGGCTCAGTTTTAGCGATCTTCCTCGTTGTAATGTCGAAGGATGA | 2616 | 41.55 | MEFADELTAGATASNSNRHKPSDTRDSGELSSSDNDTEDVFSSSSSFLFSLSILKFLASHFVFSASNPLERKANSIAFFIALVLRKRRLPELDMLLDWSSTTWTRLVCHFLVVILNMIAAFEVRTFGVHILQLPQSLFLEFSLTSMDICTRTGAPEGEKYMDDKLETIQNICQKIVDTTNLYSFSKLDDQQVYSLMRLREISHRIINDRDSRVTRNDVISAMCFYINRLAGKCKDIVDILNKMSYKDLDDQQMQQLLRLKELLCGIVDGAKDVETEPSHIVEQGMVSDMWTTESLEVEPLDSCNDDVPLGETQIVMVEDEQAVAEVRLENQYCDPHVKHSVSWPKNGSLTLEWVVEMMKTLELSSRNYSPAEFQLIMPVSVVDSILDVAASILHKEPNCVEVDCHGEVSKVVIVGDIHGHYHDLLHLFELANLPSKSQYFVFNGNYVDRGAWGLEVFLVLLAWKILMPDRVYMLRGNHETRSCTSSYGFEKEVRTKYGEQGEKVYHRCLETFKELPLAAIIAGKVYTTHGGLFRKPCNPDVQNDKERKTQKLEIGSLQDLSKLERFFIDIPTEDEDPNIVLADVLWSDPSKVDGLRENQARGAGLLWGPDSTEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSTDHDIESGKLYTLFSAPDFPQFGQKSYNNEGAYATLKYPDFETPSFHTFKAVDKPKVHELQSTILHARIDVCYFGCEGHDVDLDLTLMALADAVSSNNSSPIEIHSGVDFEALGILNPPSWSITLTDDTTGTQNVQIPKAPMVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTTENISDKEGMNELTWGDDLRVCSSIYVLSALVSWLSFSDLPRCNVEG | 871 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37044124 | 37052596 | + | ClCG09G019990.2 | Cla09g01946 | 281366 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g01946 | 871 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Cla09g01946 | 871 | SMART | pp2a_7 | 377 | 701 | IPR006186 | GO:0016787 | |
Cla09g01946 | 871 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 164 | 829 | - | - | |
Cla09g01946 | 871 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 474 | 479 | IPR006186 | GO:0016787 | |
Cla09g01946 | 871 | PRINTS | Serine/threonine phosphatase family signature | 563 | 590 | IPR006186 | GO:0016787 | |
Cla09g01946 | 871 | PRINTS | Serine/threonine phosphatase family signature | 410 | 437 | IPR006186 | GO:0016787 | |
Cla09g01946 | 871 | PRINTS | Serine/threonine phosphatase family signature | 510 | 536 | IPR006186 | GO:0016787 | |
Cla09g01946 | 871 | PRINTS | Serine/threonine phosphatase family signature | 440 | 467 | IPR006186 | GO:0016787 | |
Cla09g01946 | 871 | PRINTS | Serine/threonine phosphatase family signature | 473 | 497 | IPR006186 | GO:0016787 | |
Cla09g01946 | 871 | PRINTS | Serine/threonine phosphatase family signature | 657 | 673 | IPR006186 | GO:0016787 | |
Cla09g01946 | 871 | Gene3D | - | 309 | 714 | IPR029052 | - | |
Cla09g01946 | 871 | Pfam | Calcineurin-like phosphoesterase | 410 | 631 | IPR004843 | GO:0016787 | |
Cla09g01946 | 871 | SUPERFAMILY | Metallo-dependent phosphatases | 365 | 709 | IPR029052 | - | |
Cla09g01946 | 871 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE | 164 | 829 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g01946 | Cla-Chr9:37044124 | Cla10g00009 | Cla-Chr10:193462 | 1.32E-134 | dispersed | |
Cla09g01946 | Cla-Chr9:37044124 | Cla02g01790 | Cla-Chr2:32917161 | 6.85E-49 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g01946 | K04460 | - | csv:101211172 | 1249.19 |