Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g01948 ATGGCCGGTAAAGGAGAAGGTCCGGCAATTGGAATCGATCTTGGAACCACCTACTCTTGCGTCGGTGTGTGGCAGCATGATCGAGTTGAGATCATAGCCAACGACCAGGGCAACAGGACCACGCCGTCGTATGTTGCTTTCACCGACACTGAACGCTTGATCGGTGATGCGGCCAAGAATCAGGTCGCCATGAACCCTATTAACACCGTTTTTGATGCTAAGCGTTTAATTGGCCGAAGATTTAGCGATCCATCGGTCCAGAGTGATATCAAGCTCTGGCCATTTAAAGTTATTGCCGGCCCTAGTGACAAACCCATGATTGTTGTAAACTATAAGGGTGAAGAGAAGCAGTTTTCGGCTGAAGAAATCTCTTCTATGGTGCTCATAAAGATGAAGGAGATTGCCGAGGCGTATTTGGGAACAACAGTGAAGAACGCCGTCGTCACTGTCCCAGCCTACTTCAACGATTCACAGAGACAGGCCACCAAGGACGCCGGGGTCATTTCAGGTCTAAATGTAATGCGTATCATCAATGAACCAACTGCTGCCGCCATTGCTTATGGTCTAGACAAGAAGTCCAGCAGCTCCGGTGAAAAGAATGTTCTAATTTTTGATCTGGGCGGTGGTACCTTTGATGTTTCATTGCTCACAATCGAAGAAGGTATCTTTGAGGTGAAAGCAACTGCAGGAGACACTCATCTGGGTGGTGAAGATTTTGATAACAGATTGGTTAACCACTTCGTGCAAGAATTCAAGAGAAAGAATAAGAAAGACATTAGTGGGAATCCCAGGGCTCTTAGGAGATTGAGAACTGCTTGTGAAAGGGCTAAGAGGACACTTTCTTCTACAGCTCAAACTACAATTGAGATTGACTCTCTTTACGAAGGAATTGACTTCTATTCAACCATTACCCGTGCTAGATTTGAGGAACTCAATATGGATCTTTTCAGGAAGTGTATGGAACCAGTTGAGAAGTGCTTGAGAGATGCTAAGATGGACAAAAGCAGTGTCCATGATGTTGTTCTTGTTGGTGGTTCCACTAGAATTCCCAAGGTGCAGCAATTGTTGCAGGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGTATCAACCCTGATGAAGCTGTTGCCTATGGAGCTGCTGTCCAAGCTGCCATCTTGAGCGGTGAGGGTAATGAGAAGGTTCAAGATCTTCTGCTTTTGGATGTTACCCCTCTTTCACTTGGACTCGAAACAGCCGGCGGTGTTATGACTGTCTTGATTCCAAGGAATACCACCATCCCCACCAAGAAAGAACAAGTTTTCTCTACATACTCTGACAATCAACCTGGTGTTTTGATCCAAGTCTATGAAGGTGAGAGAGCAAGAACTCGCGACAACAACTTGCTTGGAAAATTTGAGCTGTCCGGAATCCCTCCAGCCCCTAGAGGTGTTCCTCAGATCACAGTCTGCTTCGACATTGACGCCAACGGTATTCTGAATGTTTCTGCCGAGGATAAAACCACCGGACAGAAGAACAAGATCACAATCACCAACGACAAGGGGCGGTTGTCGAAGGAAGAGATTGAGAAGATGGTGCAAGAAGCAGAGAAATACAAGGCCGACGATGAAGAACACAAGAAGAAAGTTGAAGCTAAGAACTCGTTGGAGAACTATGCTTATAACATGAGAAACACTGTGAGGGATGAGAAGTTCAGCTCAAAATTGGACCCGGCGGACAAGAAGAAGATCGAGGATGCCATCGAACAGGCAATCCAATGGCTTGACAACAACCAACTTGCTGAGGCTGATGAGTTTGAAGACAAGATGAAAGAGCTTGAGAGTATTTGCAACCCAATTGTTGCTAAGATGTACCAGGGTGCTGGTGGGCCTGGCATGGGCGGTGCCGGTATGGATGACGATGATGTTCCTCCTCCGTCCGGTGGTAGCGGCGCCGGTCCTAAGATCGAGGAAGTTGACTAA 1959 46.66 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIAGPSDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSSSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKADDEEHKKKVEAKNSLENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEQAIQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQGAGGPGMGGAGMDDDDVPPPSGGSGAGPKIEEVD 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37053583 37056127 - ClCG09G020000.1 Cla09g01948 281368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g01948 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Cla09g01948 652 Gene3D Actin; Chain A, domain 4 235 318 - -
Cla09g01948 652 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 628 - -
Cla09g01948 652 Gene3D - 10 384 - -
Cla09g01948 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Cla09g01948 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Cla09g01948 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Cla09g01948 652 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Cla09g01948 652 Gene3D - 192 366 - -
Cla09g01948 652 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Cla09g01948 652 Coils Coil 521 541 - -
Cla09g01948 652 PRINTS 70kDa heat shock protein signature 8 21 - -
Cla09g01948 652 PRINTS 70kDa heat shock protein signature 36 48 - -
Cla09g01948 652 PRINTS 70kDa heat shock protein signature 58 66 - -
Cla09g01948 652 PRINTS 70kDa heat shock protein signature 146 166 - -
Cla09g01948 652 PRINTS 70kDa heat shock protein signature 209 219 - -
Cla09g01948 652 PRINTS 70kDa heat shock protein signature 337 353 - -
Cla09g01948 652 PRINTS 70kDa heat shock protein signature 369 389 - -
Cla09g01948 652 PRINTS 70kDa heat shock protein signature 396 415 - -
Cla09g01948 652 PRINTS 70kDa heat shock protein signature 477 493 - -
Cla09g01948 652 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Cla09g01948 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Cla09g01948 652 MobiDBLite consensus disorder prediction 618 652 - -
Cla09g01948 652 Gene3D - 545 619 IPR029048 -
Cla09g01948 652 Gene3D - 71 126 - -
Cla09g01948 652 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 625 IPR029048 -
Cla09g01948 652 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Cla09g01948 652 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00820 Cla-Chr4:23247541 Cla09g01948 Cla-Chr9:37053583 0 dispersed
Cla05g00551 Cla-Chr5:5024101 Cla09g01948 Cla-Chr9:37053583 8.48E-92 dispersed
Cla08g00201 Cla-Chr8:4079068 Cla09g01948 Cla-Chr9:37053583 2.63E-15 dispersed
Cla09g00198 Cla-Chr9:1967576 Cla09g01948 Cla-Chr9:37053583 1.77E-84 dispersed
Cla09g01948 Cla-Chr9:37053583 Cla11g01102 Cla-Chr11:22417393 0 dispersed
Cla11g01635 Cla-Chr11:30031677 Cla09g01948 Cla-Chr9:37053583 1.40E-63 dispersed
Cla09g01941 Cla-Chr9:37014502 Cla09g01948 Cla-Chr9:37053583 1.08E-39 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g01948 K03283 - csv:101210925 1221.07