Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g01964 | ATGCCAATCCATAAATTTTCAATCGGATCACCTGGAGAGGCGAGCCAACCGGACGCGATCAAGGCCGCATTTGCCGAATTCTTCTCCATGATCATCTTTGTTTTCGCCGGACAAGGATCCGGATTGGCTTTTGATAAGTTAACGGACGGTGGATCTGCGACGCCGTCGGGGCTGATAGTGGCATCTCTGGCTCATGCTTTTGCGTTATTTGTGGCGGTCTCCGTCGGAGCTAATATCTCCGGTGGCCATGTAAATCCGGCAGTTACATTTGGTGCGCTCATTGGTGGAAACATATCGTTCTTTAGAAGTATAATGTATTGGTTCGCTCAATTGCTTGGTTCTGTTGTTGCGTGCTTCCTTCTCAAGTTTGCGACTGGTGGAAAGGTAACACCAGCATTTGCCTTATCATCAGGAGTTTCTGTGTGGAATGCATTTATATTTGAGGCAGTGATGACTTTTGGATTAGTATATACAGTGTATGCAACAGCAGTAGATCCAAAGAGGGAGAATTTGGGCATAATTGCCCCAATTTCTATTGGTTTCATTGTTGGTGCAAACATTTTGGTTGGTGGTGCTTTTGATGGCGCTTCCATGAACCCTGCAGTCTCCTTTGGCCCTGCTGTAATCACCTGGTCATGGACCCATCACTGGGTCTACTGGCTTGGTCCAATGGCTGGTGCAGCCATTGCTACCATTGTCTATGACACTCTCTTTATCTCAGACTCCATGCATGATCCTCTTACTCAGTATAATGATTTCTAG | 762 | 46.46 | MPIHKFSIGSPGEASQPDAIKAAFAEFFSMIIFVFAGQGSGLAFDKLTDGGSATPSGLIVASLAHAFALFVAVSVGANISGGHVNPAVTFGALIGGNISFFRSIMYWFAQLLGSVVACFLLKFATGGKVTPAFALSSGVSVWNAFIFEAVMTFGLVYTVYATAVDPKRENLGIIAPISIGFIVGANILVGGAFDGASMNPAVSFGPAVITWSWTHHWVYWLGPMAGAAIATIVYDTLFISDSMHDPLTQYNDF | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37240084 | 37242872 | - | ClCG09G020170.1 | Cla09g01964 | 281384 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g01964 | 253 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - | |
Cla09g01964 | 253 | CDD | MIP | 21 | 237 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla09g01964 | 253 | PANTHER | AQUAPORIN TIP1-1 | 1 | 247 | - | - | |
Cla09g01964 | 253 | Pfam | Major intrinsic protein | 14 | 234 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla09g01964 | 253 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla09g01964 | 253 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla09g01964 | 253 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla09g01964 | 253 | PRINTS | Major intrinsic protein family signature | 147 | 165 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla09g01964 | 253 | PRINTS | Major intrinsic protein family signature | 180 | 202 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla09g01964 | 253 | PRINTS | Major intrinsic protein family signature | 217 | 237 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla09g01964 | 253 | SUPERFAMILY | Aquaporin-like | 16 | 241 | IPR023271 | - | |
Cla09g01964 | 253 | PANTHER | AQUAPORIN-8 | 1 | 247 | IPR034294 | - | |
Cla09g01964 | 253 | Gene3D | Glycerol uptake facilitator protein. | 5 | 251 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01451 | Cla-Chr1:29009237 | Cla09g01964 | Cla-Chr9:37240084 | 3.32E-92 | dispersed | |
Cla09g01964 | Cla-Chr9:37240084 | Cla10g01892 | Cla-Chr10:34818950 | 2.39E-107 | dispersed | |
Cla09g01964 | Cla-Chr9:37240084 | Cla04g00933 | Cla-Chr4:24297743 | 2.86E-113 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g01964 | K09873 | - | csv:101222909 | 475.707 |