Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g01994 | ATGGATGCAATAGAGGAAGAAGTGAGTATGGGTAAGGAGAAGGTTCACATCAACATTGTTGTCATTGGCCATGTCGATTCTGGAAAGTCGACCACCACTGGCCATTTGATTTACAAGCTTGGAGGCATTGACAAGCGTGTTATTGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGATCGTTCAAGTATGCCTGGGTGTTGGACAAGCTTAAGGCTGAACGTGAGCGTGGTATCACAATTGATATTGCTCTGTGGAAGTTCGAGACAACCAAGTACTACTGCACTGTTATTGATGCTCCTGGCCATCGTGATTTCATCAAGAATATGATTACTGGTACTTCCCAGGCTGACTGTGCTATTCTTATCATTGATTCAACTACCGGAGGTTTTGAAGCTGGTATTTCTAAGGATGGGCAGACACGTGAACATGCCCTTCTTGCCTTTACCCTTGGTATGGATGCCACGACTCCCAAATACTCTAGGTCTAGGTACGATGAAATCGTCAAGGAAGTTTCATCCTACCTCAAGAAGGTTGGCTACAACCCAGACAAAATTCCCTTCGTCCCCATCTCTGGATTTGAGGGTGACAACATGATTGAAAGATCCACAAACCTCGACTGGTACAAGGGCCCTACCCTTCTGGAGGCTCTCGACCAAGTCCATGAGCCTAAGAGACCATCAGACAAACCCCTTCGTCTTCCACTTCAGGATGTTTACAAGATTGGAGGCATAGGAACTGTTCCAGTAGGTCGTGTCGAAACCGGTATTCTAAAACCCGGTATGGTCGTAACCTTTGCCCCATCTGGACTTACTACTGAAGTAAAGTCTGTTGAGATGCACCATGAAGCTCTTCAAGAAGCTCTCCCTGGTGACAATGTGGGGTTCAACGTGAAGAATGTCGCCGTGAAAGATCTCAAGCGTGGCTATGTTGCCTCAAATTCCAAGGATGATCCTGCCAAGGAAGCTGCCAATTTCACTTCCCAAGTTATCATCATGAACCATCCAGGACAGATTGGAAATGGTTATGCCCCTGTTCTTGACTGCCACACCTCTCACATTGCAGTCAAATTTGCCGAGATTTTAACGAAGATCGACAGACGATCTGGAAAAGAACTCGAGAAAGAGCCCAAGTTCTTGAAAAATGGGGATGCTGGATTTGTTAAGATGATTCCCACCAAGCCTATGGTGGTGGAGACATTCTCTGAGTATCCTCCACTTGGGCGATTTGCAGTCAGGGACATGCGGCAAACTGTGGCTGTTGGTGTCATCAAAAGCGTTGAAAAGAAGGATCCAAGCGGTGCTAAGGTCACCAAATCAGCTGCTAAGAAATCTGGTAACATGGGTAAGGAAAAAATTCACATTAACATTGTGGTCATTGGTCATGTCGACTCTGGCAAGTCGACCACTACTGGCCATTTGATTTACAAGCTTGGAGGCATTGACAAGCGTGTTATTGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGATCATTCAAGTATGCCTGGGTGTTGGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATTACAATTGATATTGCTCTGTGGAAGTTCGAGACCACCAAGTACTACTGCACTGTTATTGATGCTCCTGGCCATCGTGATTTCATCAAGAACATGATTACTGGTACTTCCCAGGCTGACTGCGCTGTTCTTATCATTGACTCCACTACTGGAGGTTTTGAAGCTGGTATTTCTAAGGATGGGCAGACCCGTGAACACGCCCTTCTTGCTTTTACTCTTGGTGTCAAGCAAATGATTTGCTGCTGCAACAAGATGGATGCTACCACTCCCAAGTACTCAAAATCTAGGTACGATGAAATCGTGAAGGAAGTTTCTTCTTACCTCAAGAAGGTTGGGTATAACCCAGACAAAATTCCCTTCGTCCCGATCTCTGGATTTGAGGGTGACAACATGATTGAAAGATCTACAAACCTCGACTGGTACAAGGGACCAACTCTTCTTGAGGCCCTTGACCTGATCCAAGAGCCTAAGAGACCATCAGACAAACCCCTTCGTCTTCCACTTCAGGATGTCTACAAGATTGGAGGTATTGGAACTGTTCCAGTGGGTCGTGTGGAAACTGGTATTATAAAGCCCGGTATGGTTGTCACCTTTGCCCCAACTGGACTGACTACTGAGGTTAAGTCTGTGGAGATGCACCATGAAGCTCTCCAAGAAGCTCTCCCTGGTGACAATGTGGGGTTCAACGTGAAGAATGTTGCTGTGAAGGATCTCAAGCGTGGTTACGTTGCCTCAAATTCCAAGGACGACCCTGCTAAGGAAGCTGCCAATTTCACTTCCCAAGTTATTATCATGAACCATCCAGGGCAGATTGGAAATGGCTATGCTCCTGTCCTCGACTGCCACACCTCTCACATTGCAGTCAAATTTGCCGAGATTTTAACCAAGATTGACAGGCGATCTGGAAAAGAACTCGAGAAAGAGCCCAAGTTCTTGAAAAACGGTGATGCTGGATTTGTTAAGATGATCCCCACCAAGCCCATGGTGGTGGAAACATTCTCCGAGTATCCTCCACTTGGACGATTTGCTGTGAGGGACATGCGTCAAACTGTGGCTGTTGGCGTCATCAAGGCTGTTGAGAAGAAGGATCCATCCGGTGCCAAGGTCACAAAATCTGCTGCTAAGAAATCGGGCAAATCCTCAAACCCTATTATTAAGCCCTCCACTCCAATTTCCATTCTCCATCTCTCGCCGCAAGGGTTTAAGAGCTCAGCTTTCTCGTCCCGTTCCGATTCAAGCATGGGTAAGGAGAAAATTCACATTAACATTGTGGTCATTGGTCATGTCGACTCTGGCAAGTCGACCACTACTGGCCATTTGATTTACAAGCTTGGAGGCATTGACAAGCGTGTTATTGAGAGGTTTGAGAAGGAGGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGTTGGACAAGCTCAAGGCCGAGCGAGAGCGTGGTATCACAATTGACATTGCCCTGTGGAAATTTGAGACCACCAAGTACTATTGCACTGTTATTGATGCTCCTGGCCATCGTGATTTCATCAAGAACATGATTACTGGTACTTCCCAGGCTGACTGTGCTGTCCTTATCATTGACTCCACTACTGGAGGTTTTGAAGCTGGTATTTCTAAGGATGGGCAGACGCGTGAACACGCCCTTCTTGCCTTTACTCTTGGTGTCAAGCAAATGATTTGCTGCTGCAACAAGATGGATGCCACCACTCCCAAGTACTCAAAATCTAGGTACGATGAAATTGTGAAGGAAGTTTCTTCTTACCTCAAGAAGGTTGGGTACAACCCAGACAAAATTCCCTTCGTCCCGATCTCTGGATTTGAGGGTGACAACATGATTGAAAGATCTACAAACCTCGACTGGTACAAGGGACCAACCCTTCTTGAGGCCCTTGACCTGATCCAAGAGCCTAAGAGACCATCAGACAAACCCCTTCGTCTTCCACTTCAGGATGTCTACAAGATTGGTGGTATTGGAACTGTTCCAGTGGGTCGTGTGGAAACTGGTATTATCAAGCCCGGTATGGTTGTCACCTTTGCCCCAACTGGACTGACTACTGAAGTAAAGTCTGTTGAGATGCACCATGAAGCTCTCCAAGAAGCTCTCCCTGGTGATAATGTGGGGTTCAACGTGAAGAATGTTGCTGTGAAGGATCTCAAGCGTGGTTACGTTGCCTCAAATTCCAAGGATGACCCTGCTAAGGAAGCTGCCAATTTCACTTCCCAAGTTATTATCATGAACCATCCAGGGCAGATTGGAAATGGCTATGCTCCTGTCCTCGACTGCCACACCTCTCACATTGCAGTCAAATTTGCCGAGATTTTAACCAAGATTGACAGGCGATCTGGTAAAGAACTCGAGAAAGAGCCCAAGTTCTTGAAAAACGGAGATGCTGGATTTGTTAAGATGATCCCCACCAAGCCCATGGTGGTGGAAACATTCTCCGAGTATCCTCCACTTGGACGATTTGCCGTGAGGGACATGCGTCAAACTGTGGCTGTTGGTGTCATCAAGGCCGTCGAGAAGAAGGACCCATCCGGCGCTAAAGTCACCAAGTCTGCAGCTAAGAAATCAGGGAAGTGA | 4143 | 46.85 | MDAIEEEVSMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAILIIDSTTGGFEAGISKDGQTREHALLAFTLGMDATTPKYSRSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQVHEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKSGNMGKEKIHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDPSGAKVTKSAAKKSGKSSNPIIKPSTPISILHLSPQGFKSSAFSSRSDSSMGKEKIHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKDPSGAKVTKSAAKKSGK | 1380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37509304 | 37524581 | + | ClCG09G020500.1 | Cla09g01994 | 281414 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g01994 | 1380 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 325 | 428 | IPR009001 | - | |
Cla09g01994 | 1380 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 936 | 1161 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 1257 | 1360 | IPR009001 | - | |
Cla09g01994 | 1380 | CDD | EF1_alpha | 457 | 675 | - | - | |
Cla09g01994 | 1380 | Gene3D | Translation factors | 322 | 429 | - | - | |
Cla09g01994 | 1380 | Gene3D | Translation factors | 1254 | 1361 | - | - | |
Cla09g01994 | 1380 | Gene3D | Translation factors | 771 | 878 | - | - | |
Cla09g01994 | 1380 | CDD | EF1_alpha_III | 1254 | 1357 | - | - | |
Cla09g01994 | 1380 | Pfam | Elongation factor Tu C-terminal domain | 321 | 428 | IPR004160 | - | |
Cla09g01994 | 1380 | Pfam | Elongation factor Tu C-terminal domain | 770 | 877 | IPR004160 | - | |
Cla09g01994 | 1380 | Pfam | Elongation factor Tu C-terminal domain | 1253 | 1360 | IPR004160 | - | |
Cla09g01994 | 1380 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 14 | 229 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | SUPERFAMILY | Translation proteins | 1162 | 1252 | IPR009000 | - | |
Cla09g01994 | 1380 | CDD | EF1_alpha | 18 | 226 | - | - | |
Cla09g01994 | 1380 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 453 | 678 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 509 | 524 | IPR031157 | - | |
Cla09g01994 | 1380 | Gene3D | - | 2 | 227 | IPR027417 | - | |
Cla09g01994 | 1380 | Gene3D | - | 923 | 1159 | IPR027417 | - | |
Cla09g01994 | 1380 | Gene3D | - | 440 | 676 | IPR027417 | - | |
Cla09g01994 | 1380 | CDD | EF1_alpha | 940 | 1158 | - | - | |
Cla09g01994 | 1380 | PANTHER | ELONGATION FACTOR 1-ALPHA-LIKE | 10 | 446 | - | - | |
Cla09g01994 | 1380 | PANTHER | ELONGATION FACTOR 1-ALPHA-LIKE | 932 | 1378 | - | - | |
Cla09g01994 | 1380 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 70 | 85 | IPR031157 | - | |
Cla09g01994 | 1380 | MobiDBLite | consensus disorder prediction | 884 | 907 | - | - | |
Cla09g01994 | 1380 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 992 | 1007 | IPR031157 | - | |
Cla09g01994 | 1380 | Pfam | Elongation factor Tu domain 2 | 247 | 312 | IPR004161 | GO:0005525 | |
Cla09g01994 | 1380 | Pfam | Elongation factor Tu domain 2 | 1179 | 1244 | IPR004161 | GO:0005525 | |
Cla09g01994 | 1380 | Pfam | Elongation factor Tu domain 2 | 696 | 761 | IPR004161 | GO:0005525 | |
Cla09g01994 | 1380 | CDD | EF1_alpha_III | 771 | 874 | - | - | |
Cla09g01994 | 1380 | CDD | EF1_alpha_II | 229 | 319 | - | - | |
Cla09g01994 | 1380 | TIGRFAM | EF-1_alpha: translation elongation factor EF-1, subunit alpha | 10 | 432 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 | |
Cla09g01994 | 1380 | TIGRFAM | EF-1_alpha: translation elongation factor EF-1, subunit alpha | 449 | 881 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 | |
Cla09g01994 | 1380 | TIGRFAM | EF-1_alpha: translation elongation factor EF-1, subunit alpha | 932 | 1364 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 | |
Cla09g01994 | 1380 | Pfam | Elongation factor Tu GTP binding domain | 15 | 222 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | Pfam | Elongation factor Tu GTP binding domain | 938 | 1152 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | Pfam | Elongation factor Tu GTP binding domain | 455 | 669 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | PRINTS | GTP-binding elongation factor signature | 536 | 546 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | PRINTS | GTP-binding elongation factor signature | 552 | 563 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | PRINTS | GTP-binding elongation factor signature | 596 | 605 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | PRINTS | GTP-binding elongation factor signature | 516 | 524 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | PRINTS | GTP-binding elongation factor signature | 457 | 470 | IPR000795 | GO:0003924|GO:0005525 | |
Cla09g01994 | 1380 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 12 | 248 | IPR027417 | - | |
Cla09g01994 | 1380 | SUPERFAMILY | Translation proteins | 679 | 769 | IPR009000 | - | |
Cla09g01994 | 1380 | Hamap | Elongation factor Tu [tuf]. | 933 | 1363 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 | |
Cla09g01994 | 1380 | CDD | EF1_alpha_II | 1161 | 1251 | - | - | |
Cla09g01994 | 1380 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 451 | 697 | IPR027417 | - | |
Cla09g01994 | 1380 | Gene3D | Translation factors | 228 | 315 | - | - | |
Cla09g01994 | 1380 | Gene3D | Translation factors | 677 | 764 | - | - | |
Cla09g01994 | 1380 | Gene3D | Translation factors | 1160 | 1247 | - | - | |
Cla09g01994 | 1380 | SUPERFAMILY | Translation proteins | 225 | 320 | IPR009000 | - | |
Cla09g01994 | 1380 | PANTHER | ELONGATION FACTOR 1-ALPHA-LIKE | 449 | 895 | - | - | |
Cla09g01994 | 1380 | PANTHER | TRANSLATION FACTOR | 932 | 1378 | - | - | |
Cla09g01994 | 1380 | PANTHER | TRANSLATION FACTOR | 449 | 895 | - | - | |
Cla09g01994 | 1380 | PANTHER | TRANSLATION FACTOR | 10 | 446 | - | - | |
Cla09g01994 | 1380 | MobiDBLite | consensus disorder prediction | 892 | 907 | - | - | |
Cla09g01994 | 1380 | CDD | EF1_alpha_II | 678 | 768 | - | - | |
Cla09g01994 | 1380 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 774 | 877 | IPR009001 | - | |
Cla09g01994 | 1380 | CDD | EF1_alpha_III | 322 | 425 | - | - | |
Cla09g01994 | 1380 | Hamap | Elongation factor Tu [tuf]. | 450 | 880 | IPR004539 | GO:0003746|GO:0005525|GO:0006414 | |
Cla09g01994 | 1380 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 934 | 1180 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g01062 | Cla-Chr4:25795571 | Cla09g01994 | Cla-Chr9:37509304 | 6.56E-80 | dispersed | |
Cla05g01791 | Cla-Chr5:29796490 | Cla09g01994 | Cla-Chr9:37509304 | 4.67E-80 | dispersed | |
Cla06g00765 | Cla-Chr6:10170898 | Cla09g01994 | Cla-Chr9:37509304 | 0 | dispersed | |
Cla09g00627 | Cla-Chr9:5909184 | Cla09g01994 | Cla-Chr9:37509304 | 2.70E-30 | dispersed | |
Cla09g01994 | Cla-Chr9:37509304 | Cla04g00330 | Cla-Chr4:11421572 | 7.85E-12 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g01994 | K03231 | - | mesc:110601548 | 1738.78 |