Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g02009 | ATGGCTTCCAACACTTTGATGAGCTGTGGCATTGCCACCACCGCCTTCCCTTCAGTCCTTTCCTCCTCTAAGTCTAAATTCGCCGCCGCCGTCCCGATTTCTGGCGTCGCCGTCAATGCATCATCCCGATTTTCCATGTCCGCCGAGTGGATGCCCGGCCAGCCCCGCCCTCCCTACCTCGACGGCTCCGCCCCCGGTGATTTTGGGTTCGACCCTCTTCGGCTGGGAGAAGTGCCGGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTGAAAGCTCAAGAATGGGCAGCAATTCCAGGAGGCCAAGCTACGTACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCAGGAGGTGCTTTTGACCCATTAGGCTACTCAAGAGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTATTGGCTTTTGTTGGGTTCTGTGTGCAACAATCAGCATACCCAGGAACAGGGCCACTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGATATTATCATCCCCAGATCGATTTCGCCTTGA | 741 | 53.17 | MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP | 246 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37651864 | 37653674 | + | ClCG09G020650.1 | Cla09g02009 | 281429 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g02009 | 246 | Gene3D | Chlorophyll a/b binding protein domain | 51 | 237 | - | - | |
Cla09g02009 | 246 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC | 21 | 237 | - | - | |
Cla09g02009 | 246 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 21 | 237 | IPR001344 | GO:0009765|GO:0016020 | |
Cla09g02009 | 246 | SUPERFAMILY | Chlorophyll a-b binding protein | 40 | 240 | - | - | |
Cla09g02009 | 246 | Pfam | Chlorophyll A-B binding protein | 57 | 211 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g02009 | Cla-Chr9:37651864 | Cla06g01586 | Cla-Chr6:29404223 | 4.14E-44 | dispersed | |
Cla11g01861 | Cla-Chr11:32115231 | Cla09g02009 | Cla-Chr9:37651864 | 8.93E-34 | dispersed | |
Cla09g02009 | Cla-Chr9:37651864 | Cla04g01190 | Cla-Chr4:27061578 | 1.18E-46 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g02009 | K08907 | - | csv:101211428 | 498.434 |