Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g02010 | ATGTCTTCATCGCTCTGTTCCTCAATTCGGCCATTGCCACCGCACTACTGGCGGCGGAAGAACGTCAGATTCTTCCTATTGCTTCAATCAAACAGAGGCATTTGCTTCGCACCTCGCTTCGTTGCTTGCTCGAACAACGACGACTCTGTTGCAATACCCAGACCTACGCCGCTGGCTTTCGATCCTGCGGAGGATCTGTACGGACTTGGCATCGATTTAAAACCTAGGTATGTAGCTTCTAGGGCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAGTTACCATGTCCAAGTTGCCGAGGTAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCTGATTGTTCCGTGTGTGATGGAAAGGGTATAGTGACCTGCCACCAATGTCTGGGGGATCGTGTCATATGGGAAGAGTCTATTGATGAACGACCATGGGAGAAAGCACGCTCCACTTCTCCATTAAGAATGAAGGAAGATGATGAAGTCGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCAAAGCGTGTTTACCAATCCCCTCCTCCTGAAGTGGGTTTAAAGATCAGTCGATCATTAAAAAGTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCTGCTCTTCATGCCCAGAGAGTGGCTGCAATTAAGAAAGCTAAAGGAAGTGCTGAAGCAAGAAAACGTACTTCTGAAGCTTTGAAAGCATTCTTTAACGATCCAGAAAATCGTCGAAAGCGGAGCATTGCAATGAAAGATCCAATGTTAGAAGCTTGGGCCAAAACCTCTGGATTCCAGATTCATGCTGTCATGACAACTTCAAACTTACAAGTCTTAGTTGCTAAGGAGGGGATACTCATAGGTTCACCTACTCAACTGCGTGCAGGAGTAAAATTTTACTGCAAAAACTGCGGCCGTGAAGGACATCGAAGACACTATTGTCCAGAACTTAAGGAAGCAATTGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACCGGAGGACTTGTGAGAAGTCTAGGTCGAATAGTATACCGATGACCGCAACAATTCAGCGCCATTGCGGGATATGCGGTGTGAAGGGCCACAACAGGAGGAACTGTCAGAAGTCCAAGTTGAGCAATCCAACTAACCTACGAATAAATTATGCGCATCGTCGGAGCAGTCGCAATGTGTTGAGGCTGAATTTGATCAGTGAAAATAGCAGAGTGAGGCAGTATCATTGTAGGATCTGCAATAAAAACGGTCACAGTCAGCAGAACTGTCCCAATATTGATAGGAAAGGTAACGGTCTGACTACTAGAAGATCATACAGCTGCAAACTATGCCATGAAAAAGGGCATAATATTAGGACATGCCCAAATAGAAATATGAACAATCTACAGAAAAATTCTCCTGTTGCTTTAAACCAATAA | 1476 | 44.78 | MSSSLCSSIRPLPPHYWRRKNVRFFLLLQSNRGICFAPRFVACSNNDDSVAIPRPTPLAFDPAEDLYGLGIDLKPRYVASRAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCDGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFNDPENRRKRSIAMKDPMLEAWAKTSGFQIHAVMTTSNLQVLVAKEGILIGSPTQLRAGVKFYCKNCGREGHRRHYCPELKEAIDRRFRCRVCGEKGHNRRTCEKSRSNSIPMTATIQRHCGICGVKGHNRRNCQKSKLSNPTNLRINYAHRRSSRNVLRLNLISENSRVRQYHCRICNKNGHSQQNCPNIDRKGNGLTTRRSYSCKLCHEKGHNIRTCPNRNMNNLQKNSPVALNQ | 491 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37656702 | 37665322 | + | ClCG09G020660.2 | Cla09g02010 | 281430 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g02010 | 491 | SMART | c2hcfinal6 | 317 | 333 | IPR001878 | GO:0003676|GO:0008270 | |
Cla09g02010 | 491 | SMART | c2hcfinal6 | 374 | 390 | IPR001878 | GO:0003676|GO:0008270 | |
Cla09g02010 | 491 | SMART | c2hcfinal6 | 343 | 359 | IPR001878 | GO:0003676|GO:0008270 | |
Cla09g02010 | 491 | SMART | c2hcfinal6 | 459 | 475 | IPR001878 | GO:0003676|GO:0008270 | |
Cla09g02010 | 491 | SMART | c2hcfinal6 | 428 | 444 | IPR001878 | GO:0003676|GO:0008270 | |
Cla09g02010 | 491 | Pfam | Zinc knuckle | 456 | 475 | IPR025829 | - | |
Cla09g02010 | 491 | SUPERFAMILY | Retrovirus zinc finger-like domains | 421 | 477 | IPR036875 | GO:0003676|GO:0008270 | |
Cla09g02010 | 491 | Gene3D | - | 424 | 486 | - | - | |
Cla09g02010 | 491 | Gene3D | - | 315 | 370 | - | - | |
Cla09g02010 | 491 | PANTHER | ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN | 313 | 412 | - | - | |
Cla09g02010 | 491 | ProSiteProfiles | Zinc finger CCHC-type profile. | 343 | 359 | IPR001878 | GO:0003676|GO:0008270 | |
Cla09g02010 | 491 | PANTHER | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | 15 | 270 | - | - | |
Cla09g02010 | 491 | ProSiteProfiles | Zinc finger CCHC-type profile. | 429 | 444 | IPR001878 | GO:0003676|GO:0008270 | |
Cla09g02010 | 491 | PANTHER | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | 420 | 478 | - | - | |
Cla09g02010 | 491 | PANTHER | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | 313 | 412 | - | - | |
Cla09g02010 | 491 | SUPERFAMILY | Retrovirus zinc finger-like domains | 315 | 361 | IPR036875 | GO:0003676|GO:0008270 | |
Cla09g02010 | 491 | Coils | Coil | 164 | 184 | - | - | |
Cla09g02010 | 491 | PANTHER | ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN | 420 | 478 | - | - | |
Cla09g02010 | 491 | PANTHER | ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN | 15 | 270 | - | - | |
Cla09g02010 | 491 | ProSiteProfiles | Zinc finger CCHC-type profile. | 318 | 333 | IPR001878 | GO:0003676|GO:0008270 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g02010 | - | - | csv:101211176 | 766.918 |