Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g02029 | ATGAAGGTTAATGAATCTTATGAAGCAGTGAAAAATCAGAGTAGGAAAAAGAAAAAGCAGAACTCAGGCAGCGCACCACACCCAAATTCAAAAACTCTTCCTCACGCAATCTCTAAATCAAAGAAGCTTCGTGGTAACGCCCTTCTGAATCGGCGTCTCTCTCTCTCCCTCTCTCTGCTGCCTGCTGCAGAAGCGCTTTTTACTATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGGGTTTGTGGCCATTATCACAAATACGAAGAAGGGGAAGTTTGTGGGATTTGTGGTCATCGGGTTCCAGCTACATCGGAGAAAACTTCGTTGCAAGTTAGTGCGTTTCCTTCTGAGATCTTGCCGGAGTTTCTTTATTTGGGAAGTTATGATAACGCTTCACGCTCTGAACTTTTGAAGACTCAAGGAATCTCCCGTGTTCTTAACACTGTGCCTGCTTGTCAAAATCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATATGATAAGACTTTACCTTTCGATGACGCGGTTGAATTTCTAGAGCTATGTGAAAGAGACAAGGCTCGGGTTCTGGTGCACTGCATGTCAGGAAAAAATAGGTCTCCAGCTATTGTTATAGCGTTTTTGATGAAATGTAAAGGTTGGAGACTTGCTCAGAGTTATCAGTGGGTGAAAGAGCGGAGACCATCTGTTGACTTAACTGAATCTGTCTATCAGCAGCTGCAAGAGTATGAGCAGAAGGTTTTTGGATTAGCAGAAAACTCCCTCCCAACCCTGCCAATCTTCCCTCCTGTTGGTCCGCCGTCTTTTAGCTTTGGCTTCCCAAAGACTGGCGACCCAGTTCCTACAACTCCATTCAACAGCATTGGTGCAACATCGATCTTTTCCCGCCCGACCATGGACGTACCTTCCCACGAGTTTACATTCGGTGCTGGCCAAACTCAAAACGGTTTCTCCGCTAGCCCCTTTGGCACTAATCCACGGAACTCAACCAGCAGCAACATCCAAATGGACAGTGCTTAA | 1023 | 45.94 | MKVNESYEAVKNQSRKKKKQNSGSAPHPNSKTLPHAISKSKKLRGNALLNRRLSLSLSLLPAAEALFTMRKRERENPCGVCGHYHKYEEGEVCGICGHRVPATSEKTSLQVSAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNTVPACQNLYKNSFTYHCLQYDKTLPFDDAVEFLELCERDKARVLVHCMSGKNRSPAIVIAFLMKCKGWRLAQSYQWVKERRPSVDLTESVYQQLQEYEQKVFGLAENSLPTLPIFPPVGPPSFSFGFPKTGDPVPTTPFNSIGATSIFSRPTMDVPSHEFTFGAGQTQNGFSASPFGTNPRNSTSSNIQMDSA | 340 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37875477 | 37878862 | + | ClCG09G020850.1 | Cla09g02029 | 281449 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g02029 | 340 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE IBR5 | 69 | 339 | IPR044212 | GO:0009734|GO:0009738|GO:0033549|GO:0043407 | |
Cla09g02029 | 340 | MobiDBLite | consensus disorder prediction | 306 | 340 | - | - | |
Cla09g02029 | 340 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Cla09g02029 | 340 | Gene3D | Protein tyrosine phosphatase superfamily | 98 | 250 | IPR029021 | - | |
Cla09g02029 | 340 | CDD | DSP_plant_IBR5-like | 115 | 244 | - | - | |
Cla09g02029 | 340 | Pfam | Dual specificity phosphatase, catalytic domain | 123 | 247 | IPR000340 | GO:0008138|GO:0016311 | |
Cla09g02029 | 340 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 171 | 239 | IPR000387 | GO:0016311|GO:0016791 | |
Cla09g02029 | 340 | MobiDBLite | consensus disorder prediction | 308 | 340 | - | - | |
Cla09g02029 | 340 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE IBR5 | 69 | 339 | - | - | |
Cla09g02029 | 340 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 114 | 250 | IPR020422 | GO:0006470|GO:0008138 | |
Cla09g02029 | 340 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 192 | 202 | IPR016130 | GO:0016311|GO:0016791 | |
Cla09g02029 | 340 | SMART | dsp_5 | 114 | 247 | IPR020422 | GO:0006470|GO:0008138 | |
Cla09g02029 | 340 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 115 | 249 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00286 | Cla-Chr7:3145477 | Cla09g02029 | Cla-Chr9:37875477 | 1.77E-13 | dispersed | |
Cla09g02029 | Cla-Chr9:37875477 | Cla11g00178 | Cla-Chr11:2123554 | 6.75E-07 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g02029 | K04459 | - | csv:101211000 | 518.464 |