Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g02036 ATGTTCGGGATTGAATCTCAACCAAAGGCCGTACAGCAGGATTGGAACTACAATAGAGTAATGGCGTCTTCAGATGATGAGGCTGAGACCTTGCCTCTATCTGTCTCAAATTATCACTTCGTGGATCACAAGGAAGAGCCTATTTCATTCTCTATTTTGCCGATTCAATGGGATGAAGGGGAGAGGTTGGAGGGCAGTCAAGAACCTGTTTTCCTGCATGGAACAGCCGATGATGGACTTCAAAAGGTTTATAAACAGGTTACTGCATGGAGGTTTGATATTTGCGGTTCAAAGCCAGAGATATCGGTGCTTTCCAAAGAAAATGTGTGGATTAAGCTTCAGAAGCCTAGAAAGAGCTTTGAGGATACCATTAGAACCATCTTGATCACAGTACAATGCCTTCATGCATTGAAGAGGAATCCAGATACATCTAGCAAATCTTTGTGGGATCTATTAGCCAAAATCTTCAGCTTGTATGAAGTGAGGCCTTCACAGAATGATTTGGTGGATCACATGCCTCTAATCAGTGAAGCAGTTAAAAGGGATGATATATTATCCAAGTCCCAGTTCTTACGTGCATTCCTTGAAGAGAAGCCTGTTAAGAGAATGTCATGTCATGAGGATGCTGAACATAATGTGCAGCCTAGTTTTATAGTTGATGATTCAGATGATGAAGACATGGTTGATGACGCTGTTGAAGAGGAGAGTGATGATGATGTCTTTGATTCTGTCTGTGCATTTTGTGATAATGGTGGCAACATTATATGCTGTGATGGGAGGTGCATGAGGTCCTTTCATGCAACTCAAGAGGATGGTGATTGTTTCTCGCTTGGTCTCTCTAGAGAAGAAGTTGATGCAATTGAAACCTTTATTTGCAAGAATTGCGAGTATAAACAGCACCAGTGTTATGCTTGTGGGAATTTAGGTTCATCTGATCGGTCTTCTGGTGCTGAGGTCTTCCAATGTGTAAATGCAACTTGTGGTTATTTTTATCATCCTAAATGTATTTCAAAATTGCTTCATCGGGAGAATAAAGTTGCTGCTGGAGAACTTGAGAAGAAGATTGCTTCTGGAGAATCTTTCTCATGCCCTGTGCATAAGTGCTCTGTTTGTGCACTCGGCGAAAACAAAAAAGTATGGGAATTACAGTTTGCTGTTTGCCGACGTTGTCCTAAATCATATCATAGAAAATGCTTACCAAGGAAGATCACTTTTGAAGGTTCAGAGGATGGTGAAACCCCAACCAGGGCATGGGAAAAGCTATTACCTAATCGCATATTGATATATTGCTTAGACCATGATATCGATGAAGAACTTGAGACTCCAGCAAGAGACCATATCAAATTCCCTGGTCTTGAAGAGAGTAAGATTCCTATTCAGAAAAAGAAACTTCCTACAGATGATACAAGACAAGGGAAGACAATAGGCTTTTGTGGGAGTAGGGAGAATGTTGTATCAAACAAGGGAAATATGTCAGATGACCTTCAGGGAAAATCTGCTGCAAAAGTATCCAAATCATTTGAGAGGTCCTCATCTGATGGAAAGGTTCTTGGCAAAGTGACTGAGAAATCATTGTTGGGCTCTGAGTCCAGAAAAGTGAAATTGCTTGGTAATGTTTCAAGAAAGTCTTTGAATCAAAATGGAGAATCTGTCCTCATGGACAATGATAAAACTATGAAGTTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATGCCAATCAAGAGATCTGATCAAAATAAGGCTCCTAAGGAGGATCGTATTGAACCAGGAAAGTCTGAGGCTTCTAAGCCTCTGACAAAGAAGTCGAACAGTGGGATAATCCAATTAGATGCTGAGTCGGAGAGGAGGTTAACGGATTTGATGAAAGATGCTGCATCTTCAATTACTTTGGAGAACGTAATTCAGAAGCACAAAGTTCCATCTACTCATGCATATTCTTTAAAACATGTAGTTGACAAGACAATTAAGATGGGGAAGTTGGAAGGCTCAGTTGTGGCTGTTCGAGCTGCTCTGCGCAAGCTTGAGGAAGGATGTTGCATTGAAGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAATCACATATTTAAGTGGAAGAACAAACTCAGAGTATATCTTGCACCATTTCTATATGGCATGCGCTACTCCTCCTTTGGTCGTCATTTTACAAAAGTTGAGAAACTTGTGGAGATTGTTGATAGGCTTCATTGGTACATAGAGAAAGGCGATACAATAGTGGACTTCTGCTGCGGTGCAAATGATTTTAGTGTTTTGATGAAGAAAAAACTTGATGAGACGGGTAAACGATGCTCATATAGAAACTTTGACTTTATTCCACCGAAGAACGATTTCAATTTTGAAAAAAGGGATTGGATGACTGTGCAACCAAAGGAATTGCCTAAAGGATCGCAATTGATCATGGGACTAAATCCTCCATTTGGAGTTAAGGCTGCTTTGGCAAACAAATTCATCGACAAAGCTCTTGAGTTTAATCCAAAGCTCCTTATTCTTATTGTTCCTCCTGAAACAGAGAGGCTGGATAGAAAAAAGACTCCTTATGACCTGATTTGGGAGGATAATGAGTTTTTGTCAGGAAAGTCATTTTATCTTCCTGGATCTGTCAATGCAAAGGACAAGCAGATGGATCAGTGGAATGTCCGGCCACCCGTGCTCTATTTGTGGAGTCATCGTGATTGGACTGATAAACACATAGCCATAGCCCAAAAACATGAGCATCTCTGGCCAAAGAAACAAGAGGAATCAGAAAAAGGGAAGACTTCTGATACTTTAAGGGTGAGGCAACCAGAGGAGTCTGAAAAGGGAAAGAATTCTGATTTGTCGAGGCATAGGCAACAAGAGGATTCAGGAATGGAAAAAGGATCCGAGACGTTGAGGCCTAAGCAATTGGAATCAGAAAAAGGCCAAAGCTCTAAAACTTCGGCTGATCATATTCATTTCAATGATACATTACTGATGACAGAATCTACAATACTAGCAGCAGATGAACCAGAAGATTCCAAGAGCGGATCAGTTGTCTGTGAAGTTGATAAAAATGGGTCCACAAAAACATCTTCGAAGAGGGATAGTGACAGAGAGAGTCATGACAGTCGGGACGTCCGTCCTAATCTGTCTCCTGAGGCTCCAAGGAAGAAGAGGCAGCGGTTTGAAGAAATACCTAGAAGAGGCGATGGTGAGCCATCAGAAGAGAGCAGACGTGATAGTAAAAGGCCTTCTTTAAATGAGATTAATCAGAGATCTCATGCTTCTCCAAATGTGAGTGATCATATGTCCTATAAGGCTGTTGAGAAGCCTTCATATGCTGATGCGGGAGGGATAGGACATCAGGAGCCGGGGTTGACTATGCCTGACCCGAATTCCAACTTTGGAGCTCCTTACGATGCAGCACGAGCTAGCTTAACCGATGACATTGCCAGAAAGTACAACATCAATGCTGAGGAGGCTTATTCAATTGGGACTACTGGATGGTCAAACAATGCAAGTTCCATGTATGATATTGGTTCTAGACACATTGAGGAACGTAACGTCGATCTAATGGGAGGACATGCTGATGGCCTTAACTATAAACCCTACTCTACTGGGCTTGACACATACATGAGGGACTCTGAAATACGGTCACGTGTTCGTCATTACGGGCACCCAGATACCGACAATTTAAGAAGCAATTATCAAGCTGGAGTTGATCCTAGGTATAGCAGGATTGGGGCATTCCCAGCTGCTTATGGGCATTTGGGTACATATCCTGAACCATCCCACTGGATGAACACTTCAGCAACACAACGATACGTGCCTCGACTCGATGAGTTGAACCACACTAGATTGGGGGGAATGGGTGGTGGGCATCGGGTGAATGGCAGCAATGCTTTCGACCCTAGAGCACACCTACCCTCTGGTTTCAGTGGTGCGCCACAGGGGTTTGCATCTGGTCCTCGATACCCGTCTTCAAACCAGAATTCAGCGGGTTGGCTTAATGAGTAG 3999 42.49 MFGIESQPKAVQQDWNYNRVMASSDDEAETLPLSVSNYHFVDHKEEPISFSILPIQWDEGERLEGSQEPVFLHGTADDGLQKVYKQVTAWRFDICGSKPEISVLSKENVWIKLQKPRKSFEDTIRTILITVQCLHALKRNPDTSSKSLWDLLAKIFSLYEVRPSQNDLVDHMPLISEAVKRDDILSKSQFLRAFLEEKPVKRMSCHEDAEHNVQPSFIVDDSDDEDMVDDAVEEESDDDVFDSVCAFCDNGGNIICCDGRCMRSFHATQEDGDCFSLGLSREEVDAIETFICKNCEYKQHQCYACGNLGSSDRSSGAEVFQCVNATCGYFYHPKCISKLLHRENKVAAGELEKKIASGESFSCPVHKCSVCALGENKKVWELQFAVCRRCPKSYHRKCLPRKITFEGSEDGETPTRAWEKLLPNRILIYCLDHDIDEELETPARDHIKFPGLEESKIPIQKKKLPTDDTRQGKTIGFCGSRENVVSNKGNMSDDLQGKSAAKVSKSFERSSSDGKVLGKVTEKSLLGSESRKVKLLGNVSRKSLNQNGESVLMDNDKTMKLKKSSLVGKSAMPIKRSDQNKAPKEDRIEPGKSEASKPLTKKSNSGIIQLDAESERRLTDLMKDAASSITLENVIQKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKLEEGCCIEDAEAVCEPEVLNHIFKWKNKLRVYLAPFLYGMRYSSFGRHFTKVEKLVEIVDRLHWYIEKGDTIVDFCCGANDFSVLMKKKLDETGKRCSYRNFDFIPPKNDFNFEKRDWMTVQPKELPKGSQLIMGLNPPFGVKAALANKFIDKALEFNPKLLILIVPPETERLDRKKTPYDLIWEDNEFLSGKSFYLPGSVNAKDKQMDQWNVRPPVLYLWSHRDWTDKHIAIAQKHEHLWPKKQEESEKGKTSDTLRVRQPEESEKGKNSDLSRHRQQEDSGMEKGSETLRPKQLESEKGQSSKTSADHIHFNDTLLMTESTILAADEPEDSKSGSVVCEVDKNGSTKTSSKRDSDRESHDSRDVRPNLSPEAPRKKRQRFEEIPRRGDGEPSEESRRDSKRPSLNEINQRSHASPNVSDHMSYKAVEKPSYADAGGIGHQEPGLTMPDPNSNFGAPYDAARASLTDDIARKYNINAEEAYSIGTTGWSNNASSMYDIGSRHIEERNVDLMGGHADGLNYKPYSTGLDTYMRDSEIRSRVRHYGHPDTDNLRSNYQAGVDPRYSRIGAFPAAYGHLGTYPEPSHWMNTSATQRYVPRLDELNHTRLGGMGGGHRVNGSNAFDPRAHLPSGFSGAPQGFASGPRYPSSNQNSAGWLNE 1332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37924136 37945878 - ClCG09G020910.2 Cla09g02036 281456

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g02036 1332 MobiDBLite consensus disorder prediction 578 596 - -
Cla09g02036 1332 MobiDBLite consensus disorder prediction 1021 1081 - -
Cla09g02036 1332 PANTHER ENHANCED DOWNY MILDEW PROTEIN 21 1327 - -
Cla09g02036 1332 MobiDBLite consensus disorder prediction 916 985 - -
Cla09g02036 1332 MobiDBLite consensus disorder prediction 1316 1332 - -
Cla09g02036 1332 MobiDBLite consensus disorder prediction 916 980 - -
Cla09g02036 1332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 241 298 IPR013083 -
Cla09g02036 1332 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 21 1327 - -
Cla09g02036 1332 SMART PHD_3 368 434 IPR001965 -
Cla09g02036 1332 SMART PHD_3 244 296 IPR001965 -
Cla09g02036 1332 SMART PHD_3 301 367 IPR001965 -
Cla09g02036 1332 CDD PHD3_NSD 368 400 - -
Cla09g02036 1332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 299 389 IPR013083 -
Cla09g02036 1332 MobiDBLite consensus disorder prediction 1289 1332 - -
Cla09g02036 1332 MobiDBLite consensus disorder prediction 1002 1096 - -
Cla09g02036 1332 SUPERFAMILY FYVE/PHD zinc finger 234 299 IPR011011 -
Cla09g02036 1332 Pfam Cytosine specific DNA methyltransferase replication foci domain 35 156 IPR022702 -
Cla09g02036 1332 MobiDBLite consensus disorder prediction 567 603 - -
Cla09g02036 1332 CDD PHD2_NSD 301 366 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g02036 - - - cmos:111445988 1916.35
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g591 Blo03g00537 . Bda07g00383 . . . . . . . Cma01g01105 . Car01g00978 . . . Cpe02g00796 Bhi09g01710 . . . . . . . . . . . . . . . Cone14ag1189 Cone15ag1208 Lsi02g01869 Csa07g00996 . . . . . . Bpe11g00561 . . . . Cmo01g01151 . . . . . . . . . . . . . . Cla09g02036 Cam09g2125 Cec09g2190 . . . . . . Chy01g01070 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003000 1 4 2 0 1 1 1 1 1 1 1 1 1 0 1 1 1 3 1 1 10 1 1 1 1 1 1 3 1 2 46