Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g02059 ATGAAGAGGTTCTTGTGTTTCCTATGTAATAATAATCATAATGGGTTTTTCCCTCTCATTATCATTCTTGGTTTTCTTCTCTTGGGTGTCGCCGGAGAGATCTCCGGCGGCGGCGCTGGTGGAGGAGCAGAGAGATCATATGGTATGATAAGTTGGGATGATTTGCGTGTGGATGTTTCGTGGCGGCAGGGGATGAGCTCCGGCGAGGGGTTGGAGAATGGGACAAGAATAATTGTGGTGGATAAGAATGGCTCCGGCGACTCCACGACGGTGCAAGGGGCGGTGGATATGGTTCCTCATAATAACAAACAGAGAGTTAAGATTTGTATTCTTCCTGGCATTTACAGAGAGAAGGTATACATACCAATCACCAAACCATATATTTCCTTAATCGGAAACAAGAAACGAGTTACAGATACTGTTATTACATGGAACGACAAAGCTTCCGACAAAGATATGAATGGGGTCGAGCTTGGGACGTATAGAACAGCGACAGTTGCGATCGACTCTGACTACTTTTGTGCAACAGGAATCACATTTGAGAATACAATTGTTGCAAAGCCTGGAGATAAGGGAAGACAAGGTGTAGCTTTAAGAATAACAGGGGATAAGGCCATGTTTTATAGAGTAAAATTCTTAGGAGGACAAGATACACTTTTGGATGACATGGGCACACATTACTTCTATCAATGTCACATTCAAGGAAGTCAATGTGTTATAACTTCCACAGCAGAGAGCTTTGGAGCAATAGCAGCACATCATCGGGTCTCGCCAAATGATGACACTGGGTTCTCTTTCGTGCGCAGCGTAATTAATGGAAGTGGCAAAGTACTCCTGGGAAGAGCATGGGGAAACTATTCAAGAATAATTTATTCTTACTGTTACATTGAAGATGTAATAACTCCATTAGGTTGGGATGACTGGAATGACCCATCAAGACAAAGGGGCAGTGGAGCTAACACACAAGGTTGGGTGCCATGGGCAAAGACTTTCAGCTATGAGGAAGTGAGACCTTTTGTAGATAGAAAATATATCAAAGGAGAACAATGGCTTAACTTATGA 1062 43.13 MKRFLCFLCNNNHNGFFPLIIILGFLLLGVAGEISGGGAGGGAERSYGMISWDDLRVDVSWRQGMSSGEGLENGTRIIVVDKNGSGDSTTVQGAVDMVPHNNKQRVKICILPGIYREKVYIPITKPYISLIGNKKRVTDTVITWNDKASDKDMNGVELGTYRTATVAIDSDYFCATGITFENTIVAKPGDKGRQGVALRITGDKAMFYRVKFLGGQDTLLDDMGTHYFYQCHIQGSQCVITSTAESFGAIAAHHRVSPNDDTGFSFVRSVINGSGKVLLGRAWGNYSRIIYSYCYIEDVITPLGWDDWNDPSRQRGSGANTQGWVPWAKTFSYEEVRPFVDRKYIKGEQWLNL 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38176455 38181252 + ClCG09G021160.1 Cla09g02059 281479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g02059 353 PANTHER PECTINESTERASE QRT1 48 353 - -
Cla09g02059 353 Gene3D - 72 353 IPR012334 -
Cla09g02059 353 SUPERFAMILY Pectin lyase-like 76 352 IPR011050 -
Cla09g02059 353 Pfam Pectinesterase 78 347 IPR000070 GO:0030599|GO:0042545
Cla09g02059 353 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 48 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g02059 Cla-Chr9:38176455 Cla07g00840 Cla-Chr7:23283064 5.11E-66 dispersed
Cla09g02059 Cla-Chr9:38176455 Cla08g01478 Cla-Chr8:27653586 2.06E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g02059 K01051 - csv:101209316 569.311