Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g02099 ATGCAGAAAATGGCGCAGGGATGGTTCACGCAAGGGGGTAGTAGTGGCAGTGATAATCAACTCAAAACTTCCTCTTCATTGCTCGCCGATTGGAATTCTTACGCTGAATCACAAGCTGCTGATGATAGCAGCTCCAGTTTGGGAATTGGATTCGATCTCGAAAGTGCTGTTAGGTCCGCCAATGAAACTGTTTCAGGAACTTTCAGCGTGGTTTCTAAAGGAGTGAGAGAACTTCCTGGAAACTTCCAATCTGCCACTAGCAATGTTCCCTCAGGAAAAGCCCTGATGTATTTTGGTTTGTTTCTAGCAACTGGGGTTTTCTTTATCTTCATTGCGTTTACCATGTTCCTCCCTGTCATGGTTCTGATGCCCCAAAAGTTCGCCATCTGCTTTACCCTTGGGTGTTGCTTCATCATTGGATCCTTCTTTGCACTCAAGGGTCCAAAGAATCAGCTTGCACATATGTTCTCAAAAGAGAGACTTCCTTTTACGGTGATCTTTATTGGTAGTATGTTGGGCACCTTATACGTTTCCATGGGGCTCCACAGCTATATTCTCTCCGTTATCTTCTCTGTAGTACAGGTTCTTGCACTAGCATACTATGCTGTTTCATATTTCCCTGGTGGGTCTACTGGGATGAAGTTTCTTTCATCCGCTCTTACGTCTTCGGGTAGAATTCTTCTTGAATGGAAGAATAATCTAACAAGCCCCACAGATGTTTTGCGTTCGTGGAATCCGGAGGCGGCAACGCCATGTTCATGGTTTGGAGTTATGTGCAACTCCAATGGAGAGGTGGTGGAGATAGTCCTGACACTAGTGGAATTGGAAGGTACATTGCCTACAAATTTTCAGGCTCTCAAGTCCTTGAGGGTCCTTGTGATCTCTGAGACGAATATTACTGGAAGAATTCCGAAAGAATTCGGAGATTATAGTGAGCTCAATGTTCTTGATCTTAGCAGAAATTACCTCTTGGGGAAAATCCCAGAAGAGATTTGCAGGCTGAGCAAGCTGCAAGATTTGTTTCTTCATAACAATGATTTTGAAGGGAACCTACCCTTGAAGATTGGAAATCTTTCGAGCCTTGTGAATTTCCAAATCTCAGACAATAATATCGATGGTGAGGTTCCAAAGAGCATTGGAATGTTGAAGAATCTTTATCTTTTCAAAGCTGGAGGGAATAAATTTCTACAGGGTGTAGTGCCAAGGGAGATTGGAAACTGCAGCAGTTTAACGGTGTTAGGCTTATCCGACACCGGAATCTACGGTCCTCTTCCTTCATCAATAGGGATGCTGCAAAAAATCCAGACCATACACATGTATAGATCACAACTTTTTGGTCCACTCCCAGAAGAGATTACAAACTGTAGTGAACTGCAGACTCTTCGACTGTATCAGAATGGTATTTCTGGACGAATACCAAGACGAATCGGGGAGATGAAAAAGCTTAGCGTCCTTCTTCTATGGTTGAACTTGATGGAGGGTGAAATTCCAGAAGAAATTGGCAACTGCCAGGAACTGGTACTATTTGATTTTTCAGAAAATTCTCTAACGGGAACTATACCAAAAAGTCTAGGCCGACTTCCAAAACTCGAAGACATTCAACTAAGAATTAATCAGCTTACTGGTACAATACCACCTGAAATTTCTAATATTTCTACTTTGGTTCACCTGGAAATAGACAACAACAAATTATGTGGGGAGATACCAGTTGATATAGGTAACCTCAAGAACCTGCGTACATTGCTACTATGGGAGAACAAATTAACAGGCCCTATTCCCATCACCCTCCCAGACTGCCCAAATCTCACTTTGATTGATTTATCTTTCAATCAGTTAACAGGTCCAATACCGACACGGATTTTCGCTTTGAAAGGACTCACCAAACTTCTTATGTTATCAAATAATCTATCAGGGATTATTCCTCCTGAAATTGGAAACTGTACCACACTATCCAGGCTAAGACTGTCTAAAAATAAGCTTGGAGGTACTATTCCATCAGAGATGGGAAATCTCAGGAACTTAGAACTTCTTGACATGGGCCAAAACCTTTTTGTTGGAGGATTTCCTTCATCCTTTTCCACATGTAACAAGCTTGAGTCTCTTGACCTACGTTCAAATAGGCTCACTAGTCTTCCAAATACTCTGCCAAAGAGCTTAGTGTATTTTAATGCATCCAACAACAGGCTTAAAGGTCAGCTCAACCCCAACATTGGAGGATTGATGGAATTAACTAAACTAGACCTCAAAAACAACCAGCTTTCAGGGAAAATCCCAGCAGAAATTGTTTCCTGTGAGAAAATCCAGTTTTTAGACCTCAGCAACAATTTCTTCTCTGGAGAGCTCCCTAAGGAATTAGGTACATTTGCTGCACTTGAAATTGCTCTTAATCTAAGTTACAATCAATTCTCAGGTCAAATCCCATATGAATTCTCTGGTCTAACCAAGCTAAGTATTCTAGACCTCTCCCACAACAACTTCTCTGGGGAACTTAGCTTCCTTACAGATCTTGAAAACCTAGTCACTCTAAACATCTCCTACAACCATTTCTCTGGCAAATTGCCCGACAAACCCTTCTTTCAAAAGCTCCCTGAAAGCGCCGTTATCGGAAACAAAGACCTCATTTATGTTTCAGATGGGGGAGATACTCCTAAAGACAATAGGGAATCCAGCAACATAAGCAGAGAAGCAATACATATAGCCGTGCCTATCTTGATCAGCATAAGTGCAGTGCTGTTCTTTTTAGGATTCTACATGCTAATTCGAACCCACATGGCTCGTTTCATCCTCTTCACAGAAGGCAACAAATGGGAAATAACACTGTTTCAAAAGCTCGATTTCTCAATCGACCACATTATAAGAAACTTAACTGCATCCAATGTGATCGGCACAGGAAGCTCCGGTGCGGTTTACAGAATCACAACCCCAAATGGGCAAACAATGGCAGTGAAGAAAATGTGGTCCACCGACGAAAATGGAGCCTTCAACACCGAAATCGAAACTTTGGGATCAATTCGACACAAGAACATAATTAGATTACTGGGTTGGGGATCCAACAGGAGTTTGAAGCTCTTGTTTTATGATTACCTTCCAAATGGAAACTTGAGCTCCCTTATCCATGGCCCTGAAAAAGGAGAAGCAGAGTGGGAAGTCAGATATGAAGTCCTTTTAGGAGTGGCTCACGCTCTAGCTTATCTTCACCATGATTGTATTCCACCAATCGTACATGGCGATGTGAAAACTATGAATATCCTGCTCGGCCATGACTTCGAACCATACCTAGCCGACTTTGGGATAGCCAAAATCGTGAGTACAAAAAGCGGCAATGATAATTCAGAGACGCCATCTTTGAGACCTCAACTTGCTGGCTCTTTCGGCTACATGGCCCCTGAACAAGGGTCGATGTTGAGAGTTACAGAGAAGAGCGATGTGTATAGCTTCGGTGTGGTGATAATGGAAGTTCTAACAGGGCGGCACCCGCTGGACCCGACTTTACCAGGAGGATCCAATTTGGTGCAATGGGTTCAAGATCATTTCACCACACACCGAAACACAGCCGACATTTTCGATTCAAAGCTCAGAGGAAGAACCGATCCCACAATCCACGAAATGATTCAAACCCTAGCCGTCGCATTGGTCTGTGCCAGCGTTAAGGCCGACGATCGACCGCCTATGAAAGATGTCGTCACCATGCTCGAGGAGATTCGACATGTCGAATCGGGAAGAGCTGCTACCGACGTCTCCATGCCGGAAATGGCGGTAGTGGTTCAATCGCCGCCGTAG 3780 43.36 MQKMAQGWFTQGGSSGSDNQLKTSSSLLADWNSYAESQAADDSSSSLGIGFDLESAVRSANETVSGTFSVVSKGVRELPGNFQSATSNVPSGKALMYFGLFLATGVFFIFIAFTMFLPVMVLMPQKFAICFTLGCCFIIGSFFALKGPKNQLAHMFSKERLPFTVIFIGSMLGTLYVSMGLHSYILSVIFSVVQVLALAYYAVSYFPGGSTGMKFLSSALTSSGRILLEWKNNLTSPTDVLRSWNPEAATPCSWFGVMCNSNGEVVEIVLTLVELEGTLPTNFQALKSLRVLVISETNITGRIPKEFGDYSELNVLDLSRNYLLGKIPEEICRLSKLQDLFLHNNDFEGNLPLKIGNLSSLVNFQISDNNIDGEVPKSIGMLKNLYLFKAGGNKFLQGVVPREIGNCSSLTVLGLSDTGIYGPLPSSIGMLQKIQTIHMYRSQLFGPLPEEITNCSELQTLRLYQNGISGRIPRRIGEMKKLSVLLLWLNLMEGEIPEEIGNCQELVLFDFSENSLTGTIPKSLGRLPKLEDIQLRINQLTGTIPPEISNISTLVHLEIDNNKLCGEIPVDIGNLKNLRTLLLWENKLTGPIPITLPDCPNLTLIDLSFNQLTGPIPTRIFALKGLTKLLMLSNNLSGIIPPEIGNCTTLSRLRLSKNKLGGTIPSEMGNLRNLELLDMGQNLFVGGFPSSFSTCNKLESLDLRSNRLTSLPNTLPKSLVYFNASNNRLKGQLNPNIGGLMELTKLDLKNNQLSGKIPAEIVSCEKIQFLDLSNNFFSGELPKELGTFAALEIALNLSYNQFSGQIPYEFSGLTKLSILDLSHNNFSGELSFLTDLENLVTLNISYNHFSGKLPDKPFFQKLPESAVIGNKDLIYVSDGGDTPKDNRESSNISREAIHIAVPILISISAVLFFLGFYMLIRTHMARFILFTEGNKWEITLFQKLDFSIDHIIRNLTASNVIGTGSSGAVYRITTPNGQTMAVKKMWSTDENGAFNTEIETLGSIRHKNIIRLLGWGSNRSLKLLFYDYLPNGNLSSLIHGPEKGEAEWEVRYEVLLGVAHALAYLHHDCIPPIVHGDVKTMNILLGHDFEPYLADFGIAKIVSTKSGNDNSETPSLRPQLAGSFGYMAPEQGSMLRVTEKSDVYSFGVVIMEVLTGRHPLDPTLPGGSNLVQWVQDHFTTHRNTADIFDSKLRGRTDPTIHEMIQTLAVALVCASVKADDRPPMKDVVTMLEEIRHVESGRAATDVSMPEMAVVVQSPP 1259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38517820 38532374 + ClCG09G021560.2 Cla09g02099 281519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g02099 1259 SUPERFAMILY RNI-like 273 613 - -
Cla09g02099 1259 Gene3D Ribonuclease Inhibitor 380 529 IPR032675 -
Cla09g02099 1259 SUPERFAMILY Protein kinase-like (PK-like) 946 1234 IPR011009 -
Cla09g02099 1259 ProSitePatterns Protein kinases ATP-binding region signature. 961 984 IPR017441 GO:0005524
Cla09g02099 1259 ProSiteProfiles Leucine-rich repeat profile. 697 718 IPR001611 GO:0005515
Cla09g02099 1259 Gene3D Ribonuclease Inhibitor 625 878 IPR032675 -
Cla09g02099 1259 Pfam Got1/Sft2-like family 95 207 IPR007305 GO:0016192
Cla09g02099 1259 ProSiteProfiles Protein kinase domain profile. 955 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g02099 1259 Gene3D Transferase(Phosphotransferase) domain 1 1029 1251 - -
Cla09g02099 1259 Pfam Leucine rich repeat 649 708 IPR001611 GO:0005515
Cla09g02099 1259 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Cla09g02099 1259 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 218 1243 - -
Cla09g02099 1259 Pfam Protein kinase domain 958 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g02099 1259 SUPERFAMILY RNI-like 510 851 - -
Cla09g02099 1259 SMART serkin_6 955 1231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g02099 1259 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 218 1243 - -
Cla09g02099 1259 MobiDBLite consensus disorder prediction 1 21 - -
Cla09g02099 1259 SMART LRR_typ_2 527 551 IPR003591 -
Cla09g02099 1259 SMART LRR_typ_2 334 358 IPR003591 -
Cla09g02099 1259 SMART LRR_typ_2 695 718 IPR003591 -
Cla09g02099 1259 SMART LRR_typ_2 575 599 IPR003591 -
Cla09g02099 1259 SMART LRR_typ_2 740 764 IPR003591 -
Cla09g02099 1259 SMART LRR_typ_2 600 623 IPR003591 -
Cla09g02099 1259 SMART LRR_typ_2 813 836 IPR003591 -
Cla09g02099 1259 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1073 1085 IPR008271 GO:0004672|GO:0006468
Cla09g02099 1259 Gene3D Phosphorylase Kinase; domain 1 934 1028 - -
Cla09g02099 1259 Pfam Leucine rich repeat N-terminal domain 224 260 IPR013210 -
Cla09g02099 1259 Gene3D Ribonuclease Inhibitor 221 379 IPR032675 -
Cla09g02099 1259 Gene3D Ribonuclease Inhibitor 530 624 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01317 Cla-Chr1:26502600 Cla09g02099 Cla-Chr9:38517820 0 dispersed
Cla09g00922 Cla-Chr9:9586601 Cla09g02099 Cla-Chr9:38517820 0 dispersed
Cla09g02099 Cla-Chr9:38517820 Cla06g00723 Cla-Chr6:9277151 0 dispersed
Cla09g02099 Cla-Chr9:38517820 Cla06g01679 Cla-Chr6:30378810 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80829 PF00069 Pkinase 1.20E-35 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g02099 - - csv:101221377 1677.14