Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g02100 ATGCCGCAGGAATTAAGCTTTGTGAATTCGAAATTAATGTCTCCGAATAAGAATGTGAGAGGATTGAAAGCTCTGGTTGCGATTTGTAATGATCATGCTTCTTCTGATTCTGCGATTTCTGAGGAAGTTATCAATGACCATGAATTGGCTCATCGCAAAGCCGAAGAAGCTGCATCCAGGAGGAATCAAGCAGCAGAATGGCTACGCCAAATGGATCATGGAGCATCAGGAGTACTATCCAAGGAGCCCTCTGAAGAAGAATTCTGTCTTGCACTTCGCAATGGTCTTATCCTCTGCAATGTGGTGGAGAGTCCAGTTGTAACAGTTCAGTCAGCAGAAGGAGCTGCACAATCAGCAATCCAGTATTTTGAGAACATGAGGAACTTCTTGGAGGCAGTTAAAGACATGAAGCTCTTGACATTTGAAGCTTCTGACTTGGAAAAGGGAGGTACTTCAGGAAAAGTTGTAGAGTGTATTCTCTGCTTGAAAGGATATTACGAGTGGAAGCAAGCTGGTGGGATTGGGGTTTGGAGATATGGAGGAACTGTACGGATCACATCTCTCGCCAGAAGTTCACCATGCATAACTGAAAGTGAGAGTACAGACGAGTCGGTAGACGAATCAGATTCGTCTCAGTTCGAGCAGCTACTAGACTTCCTCCATCTTTCTAATGAAGTTTCAGTTGAAGAATCCAGAACTTGCAGTGCTCTTGCTTTTCTTTTTGATCGTTTTGGACTTAAACTTCTACAGGCGTACCTCCGAGAGAGTGATGGGATTGAAGATTTGCCTTTAAATGCAATGGTAGGTAAGGTAATTGATGCATTACTTAGCAAGGTTGTTAAGGATTTCTCTGCACTGCTTGTGTCTCAAGGCACTCAGCTTGGACTCTTTCTGAAGAAAATATTGAAAAGTGACTTGAGTTCACTGTCAAAATCTGAATTCATTGAAGCAATTTCCCGATATATCAACCAAAGAGCTAATATGGCATCAAGCGACTTCTCCAAGTTCTGTGTTTGTGGAGGAAAACGTGAGGTTATTCATAGGGCTCCTGCTGGCCATGATGAACTGGTTCATTCTCAACAGAATCAGATTCAGGAGCTAAAATCAGCATTTCAAGAAACCAAACTTGAAGTTAAACACATACAGTCTCAATGGAACGAAGAAGTTGAAAGGCTAGAACATCATCTCAAGGGCCTTGAGATGGCTTCCTCTTCTTACCACAAGGTCTTGGAAGAGAATCGTATACTTTACAATCAAGTTCAAGACCTTAAAGGAACAATAAGGGTGTACTGTAGAGTGAGGCCTTTCTTATCAGGACAATCAAATCAGCATTCTACGGTGGACTACATTGGAGAAAATGGGAACATTATGATTGCAAATCCTCTAAAGCAAGGGAAAGAAGCAAGAAGAGTATTTTCCTTCAATAAAGTTTATGGAACTAATGTTACCCAAGAAAAAATATATATCGACACTCAACCGTTGATCAGATCTGTTCTTGATGGTTTTAATGTTTGCATCTTCGCTTATGGACAAACTGGCTCGGGAAAGACGTATACAATGAGTGGCCCAGATTTGATGACTGAGGACACATGGGGCGTTAATTATCGAGCTCTCAATGACTTATTCCAGATATCAAATGCAAGGTCGGATATGATAAAGTATGAAGTTGGAGTTCAAATGATTGAAATATACAATGAGCAAGTGAGAGATTTGTTGGTCAGTGATGGCTCAAACAGAAGATATCCTTTTAAACAACAAAATATACGAAACAACTCTCAACTTAGTGGCCTCAATGTGCCTGATGCAAGTTGGGTTCCGGTGACATGTACTCAAGATGTTCTTTGTTTGATGAGAATTGGCCAGAAGAATCGAGCTATTGGTGCTACGGCTTTAAATGAGAGAAGTAGTCGCTCGCACAGTGTTTTGACAATTCATGTCCTTGGAAAAGATTTGGTCTCCGGATCCACCCTTAGGGGGTGTCTTCATCTAGTAGATCTAGCTGGGAGTGAAAGAGTGGACAAATCTGAAGCTGTTGGCGACAGACTAAAGGAAGCACAGCATATAAACAAATCCCTCTCTGCACTTGGAGATGTAATTTCTGCCCTTGCACAAAAGAGTGCACATATTCCATACAGGAATAGCAAACTCACTCAACTCCTACAAGATTCTTTAGGTGGACAAGCTAAGACATTGATGTTTGTACATATAAATCCCGAAGTTGACGCTCTTGGAGAGACAATTAGCACGCTTAAGTTTGCTGAGAGAGTTGCCTCCATAGAATTAGGTGCAGCTCGTTGTAATAAAGAAAATGGTCAAATTCGAGAACTTAAGGATGAGATATCAAATCTTAAATTGGCATTGGAGAGGAAGGATGCAGAGCTTGAACAACTAAAAAGTGGCAATGCTCGAGCCTTCGTAGAAATTCAGAAGCCAAGAGCTGCCTCTCCCTTCCGCGTTCTTAGACATGGTACCAATGGAGGTGCTAAGTCTGAAAATTGTCAACGGCCTTTGGATGATGCTAAAACTTTGGAGGCAAGAAGCTACTCTTCAGGAAAGCAAAGAAGGTCAAGATTTCCCTCTACATTCACGGAGAAAGATGCAATAAAAATGCCATTATTAGCTGAAGAGAGATCAACAACTAGTTCAAACTCTGGAAACCCAAGGTCACCATCTCCACCAGTTAGGAGATCAATATCAACAGATAGGGGTGCCTTTATAAGAAGCAAGGTTAAAATGGAGACGAACGAGAACCAACCAATAGCCAAGCCTTCATTTCCTGCGAGAGTGAACATTAACAAGTCGATGGCCGCAGTCCCAGCAATCGATAATCGAGGAAGAGTAAACATCAGTTGTCAAGAGCATGAAAACTTCTCTGATGCATTGGTTGGTATCCAAAAAGCAATGGCCTCAACAAAGAAGAAACAACTGGTTTGCCAAGAAAGCAATGAAGATGAACAACAGGTGAAGCAGTCTCTAAATACAATGCAAGGTGGTGCAAGGAGAAGCAGAAATGAAGGCAAAACCAAAGCAAAGCAACAGCAGTTACCGGGTGCAGCAGCTAGGATTAATAATCAAAAGCAGCCTGAGCATGTGGCAACAACATTACTTACTGATATTAATGCTGCTGTAAAAATGGAGGATGCAAGAAAGAGTGAATTCTCTGAAATGGATAACGAGCATTTTCTTGTGGGATTGCCTCTTGATGGTGCTTTGAAGGTGAAAAAAGCTCGTCAAAACTTCCCAAGAAACTCTCAGAATCTGGAACCACCAAGAGAACGGCCATGGCAGCCAGCTGAAAAAAATTCAAGTTCAATAGTAACCGGCGATGATTTTTGCGAATTTCATCGACAAATGAAAGCCATGGCGGGATTCAGCATCCGAGCCTCAGTTCAGCTTCAACATAGAGTTCTTTCAATATCGTGGGTGAAGAAAAGCGGCGTTTTTACTTGCTTGAAAGCCAGAGTGTATAGCTCGTCAGGTCCTGTTAGGTACATTCCAAAAAGGACTTTAAATGATAAGAAATCAAAAACACATTCGACACCGGACATTGTGAATGGAAACGATTTCAGTAGTGGGTTGGATGTTACTGCACGGAGGATAGAGGTTAAACACAGGGGTGCAGTACGGAGAAGTAATTTTAATGATATATTGCGTGATCAAAATCAGTATGAGAAGGAAAACTACCCAGCTGGTGGAAGTATGCTAGAGTTGTCCATCCAAGAGATAGTATTGAACGCCATATCTAAGCTTCTAAGAGGGGAAAGAATCAGTAGAAACAGCTCAATGAGCTATGATAGAAACCAGTTCATTTCTGCATCAGAAGGACTCGAAGATGAATTTGATGACAATTTGAGCCACGTTCACGATCTCTTGCAAGAGCCTGAGGCAGTAGATGAGGAGTTAAATATTTATGACAAGAAATGTTATGATGGAAACAATGATTTGCGGGGAAATAAAAATAAGCAAGATGCTGAGAAATTGGCGATTGAATTACTAGCAACAAGAGCCTTCACTGCAGTCCAGCTAAGGAAGAAATTGATTGGCAAGAGGGTCTCTCCGGTAGCAGTGGAAGGAGTGATCAATGATTTCAAAAGCAGGGGGTTGATCAACGATGGGTTGTATGCCGAAGCATTTTGTCGTTCGAGGTGGTCTTCCTCCAGTTGGGGACCAAGGAAGATCAAGCAGTTTTATGATACTGAGAGTGAGATGAGATGCAATTGTTTGAACCAGGCACTTGTGAATAAGGGGATAGGAGGGGAAGTTGCTGAGAAAGCAATTAAACTAGTTTTTGAAGATGGTGAAGAATCAGATGATGGAATGTCAAGTGTGGGATTGTCAAAGGTTTCAATGGATCGTTTATTTGTTGAAGCCTCGAAACAGTGGGTGCGAGGCCGAGATGCACCGGAAGAGACTAGAAAATCAAGAATAGTTAGGTGGCTTCAATACCGGGGTTTCGACTGGGGTGTTACTAGTACCATTCTAAAGAAGTTAGAAACTGAGTACCCTCCTTAG 4512 41.87 MPQELSFVNSKLMSPNKNVRGLKALVAICNDHASSDSAISEEVINDHELAHRKAEEAASRRNQAAEWLRQMDHGASGVLSKEPSEEEFCLALRNGLILCNVVESPVVTVQSAEGAAQSAIQYFENMRNFLEAVKDMKLLTFEASDLEKGGTSGKVVECILCLKGYYEWKQAGGIGVWRYGGTVRITSLARSSPCITESESTDESVDESDSSQFEQLLDFLHLSNEVSVEESRTCSALAFLFDRFGLKLLQAYLRESDGIEDLPLNAMVGKVIDALLSKVVKDFSALLVSQGTQLGLFLKKILKSDLSSLSKSEFIEAISRYINQRANMASSDFSKFCVCGGKREVIHRAPAGHDELVHSQQNQIQELKSAFQETKLEVKHIQSQWNEEVERLEHHLKGLEMASSSYHKVLEENRILYNQVQDLKGTIRVYCRVRPFLSGQSNQHSTVDYIGENGNIMIANPLKQGKEARRVFSFNKVYGTNVTQEKIYIDTQPLIRSVLDGFNVCIFAYGQTGSGKTYTMSGPDLMTEDTWGVNYRALNDLFQISNARSDMIKYEVGVQMIEIYNEQVRDLLVSDGSNRRYPFKQQNIRNNSQLSGLNVPDASWVPVTCTQDVLCLMRIGQKNRAIGATALNERSSRSHSVLTIHVLGKDLVSGSTLRGCLHLVDLAGSERVDKSEAVGDRLKEAQHINKSLSALGDVISALAQKSAHIPYRNSKLTQLLQDSLGGQAKTLMFVHINPEVDALGETISTLKFAERVASIELGAARCNKENGQIRELKDEISNLKLALERKDAELEQLKSGNARAFVEIQKPRAASPFRVLRHGTNGGAKSENCQRPLDDAKTLEARSYSSGKQRRSRFPSTFTEKDAIKMPLLAEERSTTSSNSGNPRSPSPPVRRSISTDRGAFIRSKVKMETNENQPIAKPSFPARVNINKSMAAVPAIDNRGRVNISCQEHENFSDALVGIQKAMASTKKKQLVCQESNEDEQQVKQSLNTMQGGARRSRNEGKTKAKQQQLPGAAARINNQKQPEHVATTLLTDINAAVKMEDARKSEFSEMDNEHFLVGLPLDGALKVKKARQNFPRNSQNLEPPRERPWQPAEKNSSSIVTGDDFCEFHRQMKAMAGFSIRASVQLQHRVLSISWVKKSGVFTCLKARVYSSSGPVRYIPKRTLNDKKSKTHSTPDIVNGNDFSSGLDVTARRIEVKHRGAVRRSNFNDILRDQNQYEKENYPAGGSMLELSIQEIVLNAISKLLRGERISRNSSMSYDRNQFISASEGLEDEFDDNLSHVHDLLQEPEAVDEELNIYDKKCYDGNNDLRGNKNKQDAEKLAIELLATRAFTAVQLRKKLIGKRVSPVAVEGVINDFKSRGLINDGLYAEAFCRSRWSSSSWGPRKIKQFYDTESEMRCNCLNQALVNKGIGGEVAEKAIKLVFEDGEESDDGMSSVGLSKVSMDRLFVEASKQWVRGRDAPEETRKSRIVRWLQYRGFDWGVTSTILKKLETEYPP 1503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38534088 38549456 - ClCG09G021580.2 Cla09g02100 281520

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g02100 1503 MobiDBLite consensus disorder prediction 982 1021 - -
Cla09g02100 1503 PANTHER KINESIN-LIKE PROTEIN KIN-14F 32 1106 - -
Cla09g02100 1503 Gene3D Kinesin motor domain 368 761 IPR036961 -
Cla09g02100 1503 MobiDBLite consensus disorder prediction 982 1001 - -
Cla09g02100 1503 Pfam RecX family 1349 1395 IPR003783 GO:0006282
Cla09g02100 1503 Pfam RecX family 1408 1496 IPR003783 GO:0006282
Cla09g02100 1503 Gene3D - 49 167 IPR036872 -
Cla09g02100 1503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 427 795 IPR027417 -
Cla09g02100 1503 Hamap Regulatory protein RecX [recX]. 1311 1501 IPR003783 GO:0006282
Cla09g02100 1503 MobiDBLite consensus disorder prediction 875 896 - -
Cla09g02100 1503 Coils Coil 766 800 - -
Cla09g02100 1503 SMART kinesin_4 424 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla09g02100 1503 Pfam Kinesin motor domain 432 759 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla09g02100 1503 PRINTS Kinesin heavy chain signature 501 522 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla09g02100 1503 PRINTS Kinesin heavy chain signature 709 730 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla09g02100 1503 PRINTS Kinesin heavy chain signature 660 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla09g02100 1503 PRINTS Kinesin heavy chain signature 629 646 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla09g02100 1503 Gene3D - 1370 1396 IPR036388 -
Cla09g02100 1503 Coils Coil 357 402 - -
Cla09g02100 1503 PANTHER KINESIN-LIKE PROTEIN KLP-3 32 1106 - -
Cla09g02100 1503 Pfam Calponin homology (CH) domain 59 167 IPR001715 GO:0005515
Cla09g02100 1503 ProSiteProfiles Calponin homology (CH) domain profile. 58 167 IPR001715 GO:0005515
Cla09g02100 1503 MobiDBLite consensus disorder prediction 817 902 - -
Cla09g02100 1503 SUPERFAMILY Calponin-homology domain, CH-domain 54 184 IPR036872 -
Cla09g02100 1503 MobiDBLite consensus disorder prediction 1078 1105 - -
Cla09g02100 1503 ProSiteProfiles Kinesin motor domain profile. 426 759 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g02100 K10406 KIFC2_3; kinesin family member C2/C3 - csv:101221138 1859.34
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01010 Cla-Chr7:26488452 Cla09g02100 Cla-Chr9:38534088 2.12E-95 dispersed
Cla09g02100 Cla-Chr9:38534088 Cla10g01064 Cla-Chr10:24658542 0 dispersed
Cla09g02100 Cla-Chr9:38534088 Cla03g00482 Cla-Chr3:5344976 1.80E-73 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g727 Blo03g00494 . . . . . . . . . Cma01g01058 Cma09g01033 Car01g00932 Car09g00939 . Cpe06g00841 Cpe02g00838 Bhi09g01820 . . . . Mch11g1312 . . . . . . . . Cone6ag0001 Cone9ag0003 . . Lsi02g01801 Csa07g01062 . . . . . . Bpe11g00603 . . Bma14g00667 . Cmo01g01099 Cmo09g01035 . . . . . . . . . . . . . Cla09g02100 Cam09g2186 Cec09g2255 . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007328 0 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 2 1 1 1 1 1 36