Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla09g02172 | ATGCTCTCTTTTTTAGCTGCAATGCTAATAATATCCATTGTTCTAGTCTTGAGGAGCAATAAGAGAAGCAAAAATATACCACCTGGGCAAATGGGTCTTCCTTGGATTGGCGAAACAATGGCTTTTTACAAAGCCCAACGTAAAAACAGAGTATTTGAAGACTTTGTTAGGCCTCGAGTGGCTAAACATGGCAAAATCTTCAAAACAAGCTTAATGGGATCTCCAACAGTGGTTGTAAATGGAGCTGAAGCCAATCGATTTTTCTTGTCAAATGAGTTTAAGTTAGTGGTGAGTTCATGGCCATCGGGTTCTGTTCAGTTGATGGGTGAAGAATGCATTATGCAAAAGCAAGGTGAAAGGCACAGAATTGTGCGTGCTCTTATTGCTGCAAGTCTTTCTAGTTCGAGTCTTGAAGTTATGATGCCTAAATTGTGCAATACAATTAAGGTTTATTTGGAAACTAAATGGGTTGGTTGTGACACAATTGGTCTATTCCATTCGGCAAAAGTATTGACTTTTACCATAGTGTTTGAGTGTTTGATGGGTATTAAAGTGGAGCCACGTGTGTTGATGACATTTGAGAGAGTTTTGGAGGGTGTTTTTGTACCACCGCTCAGGTTTTCAAGAGCCAAGAAAGCAAGGTTGGAGATAGAGAAAATGCTAAGGGAAGTGGTGAGAGAGAAGAGGAGGGGAATTGAAGGAAAGTTAGAAGAAGAAGAAGAAGAAGAATGTGGGTCATTGCTTTCAAGGATGGTGAGAGCAATGATAAGAGGGGAGATCAATGAAACGGAAGTCATAGACAATGTGGTTTTGCTTGTTTTTGCAGCTCATGATACAACTTCCTTTGCCATTGCCATGACTTTCAAGATGTTAGCTCAACATTCAAACTGCTACTCACTTCTTCTCCAGGAACACACTGACATAGTGAGAAGCAAGGGGCCAAGCCAGAATTTGACGATGGAAGATATAAAGAAGATGAAATATACTTGGCAAGTAGCTCGTGAGAGCATTAGACTGTTTCCTCCTATATTTGGTTCTTTCAGGAAAGCCATTTCAGACATTGAATATGAGAGATTTTTCATTCCCAAAGGATGGAAGGTGAAAATTTCAATAAATTCTTCTGCTGTTTCTTTACATCAGTTGATATATCCTGCAGTAAATTGTTGTCCAGAAATGACCATCATTTTACCTCGAATCATTTTGGTTGCATGGCAGGTATTGTGGACGACGTATGGAACACATTACGAAGAAGAGTACTTTGAAGATCCATTGAGTTTCAAGCCAAGCAGATTTGAGGAACCTGTTTCTCAGTATGTTTATGTTCCATTTGGAGGAGGGCCAAGAGCTTGTGCAGGCTACCAGCTGGCGAAATTGAACATCCTCATCTTTATACATTTGGTTGTAACTCGTTATGACTGGAGCTTAGTCCATCCAGATGAGCCAATCATAATGGATCCTCTCCCTGTCCCTTCTCATGGAATGCCAATTAAGATTTCTCCAAAATCAGAAGTTTGTCCCAATGTTCACCAAATGTAA | 1536 | 40.1 | MLSFLAAMLIISIVLVLRSNKRSKNIPPGQMGLPWIGETMAFYKAQRKNRVFEDFVRPRVAKHGKIFKTSLMGSPTVVVNGAEANRFFLSNEFKLVVSSWPSGSVQLMGEECIMQKQGERHRIVRALIAASLSSSSLEVMMPKLCNTIKVYLETKWVGCDTIGLFHSAKVLTFTIVFECLMGIKVEPRVLMTFERVLEGVFVPPLRFSRAKKARLEIEKMLREVVREKRRGIEGKLEEEEEEECGSLLSRMVRAMIRGEINETEVIDNVVLLVFAAHDTTSFAIAMTFKMLAQHSNCYSLLLQEHTDIVRSKGPSQNLTMEDIKKMKYTWQVARESIRLFPPIFGSFRKAISDIEYERFFIPKGWKVKISINSSAVSLHQLIYPAVNCCPEMTIILPRIILVAWQVLWTTYGTHYEEEYFEDPLSFKPSRFEEPVSQYVYVPFGGGPRACAGYQLAKLNILIFIHLVVTRYDWSLVHPDEPIIMDPLPVPSHGMPIKISPKSEVCPNVHQM | 511 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 39376329 | 39378584 | + | ClCG09G022360.2 | Cla09g02172 | 281592 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla09g02172 | 511 | SUPERFAMILY | Cytochrome P450 | 27 | 499 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | Pfam | Cytochrome P450 | 27 | 373 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | Pfam | Cytochrome P450 | 405 | 486 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | PANTHER | TAXADIENE 5-ALPHA HYDROXYLASE | 13 | 370 | - | - | |
Cla09g02172 | 511 | PANTHER | TAXADIENE 5-ALPHA HYDROXYLASE | 403 | 500 | - | - | |
Cla09g02172 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506|GO:0016705 | |
Cla09g02172 | 511 | Gene3D | Cytochrome P450 | 16 | 501 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | PRINTS | P450 superfamily signature | 275 | 292 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | PRINTS | P450 superfamily signature | 331 | 342 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | Coils | Coil | 210 | 242 | - | - | |
Cla09g02172 | 511 | PANTHER | CYTOCHROME P450 26 | 13 | 370 | - | - | |
Cla09g02172 | 511 | PANTHER | CYTOCHROME P450 26 | 403 | 500 | - | - | |
Cla09g02172 | 511 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | PRINTS | E-class P450 group I signature | 409 | 433 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla09g02172 | 511 | PRINTS | E-class P450 group I signature | 264 | 281 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g02172 | Cla-Chr9:39376329 | Cla05g02039 | Cla-Chr5:32102232 | 2.53E-60 | dispersed | |
Cla09g02172 | Cla-Chr9:39376329 | Cla05g01495 | Cla-Chr5:24133776 | 2.33E-96 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla09g02172 | - | - | csv:101220115 | 792.727 |