Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla09g02179 ATGGTATTGCCACCGTCCAATCCATCCTTATCCATACGTTCTGGGCTCTACGAATGTTTTGGGATTGCAGGTGGGGAAGTGTATGAGGGATTTGATTTGGGTAATTTTATTATGTTCCGTGGAGGATTCGGGAAGGAGCATAAGGAGGGATTGTGGATTTCGTCTTCACTGTCTCCAACCTGGTTTGAGACTTTAAGGAAATGCAGACCGGTCATCAATTCTGCAGAATTGGACTTTTTCTCTGAATACGGCGATGCCAACAGATTCAAAGTTCGCGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACACGATATTTTTGAACATGTATCTGATGCTGCCCGTATTCTTCGTGAGATAAAGCTGCTCAGGCTTCTACGTCATCCTGATATTGTTGAAATTAAACACATTATGTTACCACCTTCTCGTAGGGGGTTCAAAGATATTTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAACGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTATCAGCTACTCCGTGCGCTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATCTGTGATTTTGGATTGGCTAGAGTTGCTTTTAGTGACACCCCAACTACAATATTTTGGACGGACTATGTTGCTACTAGATGGTATAGGGCTCCAGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTGACCGGGAAACCACTTTTTCCTGGTAAAAATATTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACACCGTCATTGGATACCATTTCTCGGGTAAGAAATGAAAAGGCCAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCTCAGAAGTTCCCTAATGCTGATCCTGTAGCCCTGCAATTGCTACAACGATTGCTTGCATTTGATCCAAAGGATCGACCTACTGCTGAAGAGGCTTTGGCAGATCCTTACTTTAAGGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAAAGGAGAAAGGTCACAAAGGATGACATTCGCGAGCTAATATTCCTTGAGATACTAGAATACCATCCTCAACTGCTAAAAGACTACTTAAATGGAACTGAGAGATCAAATTTTCTTTATCCAAGTGCACTAGATCAGTTCAAAAAGCAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTTTAGAAAGAAAACATGCATCTCTTCCTAGGTCTTCAGTACAGTCAAATACCATTCCTCCTAAAGCTACATCAAATATTGTTTCCTTTAAAGACCGATATGCGCCAGCAGGTTCGTTCAGCAGTCAGCATTTCAGAGATCCAGCAGCGCAGAGGATTGCTGCTGCTCAAGCCAAGCCTGGAAGAATCTCGGGCCCGGTCGTGCCATATGAAAGTGGAAGTATTGTTAAAGATGCCTACGACCCGAGAATGTTAATTAGAAGTGCCTTCCCTTCTCATGCTATCCATCCAACATATTACTATCAGCAATCTTGCGGCCAAAATGAAGAAAGATCAGCAACGGGGGCTGAACAGGACACATCCTTGCAATGTAAACAATCCCCTCAATGTGGAATGGCTGCCAAATTAGCAGGAGATACAGCTGCTACTGGTGCTTTCTCAAATCCTTTCTTTATGGCGCGTGTAGGCATGCCCAAGATCGGAAACAATGACCGTGCTGCACGTTTGCAGGTAAGTGCTCAATATGATGCTGGAGCTGTTGCTGCTGCAACTACCACCACCCATCGAAACACTGGCACGGTCGAGTATGGCATGACAAGAATGTGTTAG 2010 42.69 MVLPPSNPSLSIRSGLYECFGIAGGEVYEGFDLGNFIMFRGGFGKEHKEGLWISSSLSPTWFETLRKCRPVINSAELDFFSEYGDANRFKVREVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNIVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPVALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFLEILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHASLPRSSVQSNTIPPKATSNIVSFKDRYAPAGSFSSQHFRDPAAQRIAAAQAKPGRISGPVVPYESGSIVKDAYDPRMLIRSAFPSHAIHPTYYYQQSCGQNEERSATGAEQDTSLQCKQSPQCGMAAKLAGDTAATGAFSNPFFMARVGMPKIGNNDRAARLQVSAQYDAGAVAAATTTTHRNTGTVEYGMTRMC 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39428202 39435389 - ClCG09G022410.2 Cla09g02179 281599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla09g02179 669 SMART serkin_6 89 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g02179 669 ProSitePatterns MAP kinase signature. 124 227 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cla09g02179 669 Pfam Protein kinase domain 90 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g02179 669 ProSitePatterns Protein kinases ATP-binding region signature. 95 119 IPR017441 GO:0005524
Cla09g02179 669 Gene3D Phosphorylase Kinase; domain 1 104 426 - -
Cla09g02179 669 ProSiteProfiles Protein kinase domain profile. 89 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla09g02179 669 SUPERFAMILY Protein kinase-like (PK-like) 86 384 IPR011009 -
Cla09g02179 669 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 73 530 - -
Cla09g02179 669 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 73 530 - -
Cla09g02179 669 Gene3D Transferase(Phosphotransferase) domain 1 175 403 - -
Cla09g02179 669 CDD STKc_TDY_MAPK 88 425 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00638 Cla-Chr7:12421762 Cla09g02179 Cla-Chr9:39428202 0 dispersed
Cla07g00987 Cla-Chr7:26083570 Cla09g02179 Cla-Chr9:39428202 0 dispersed
Cla09g02179 Cla-Chr9:39428202 Cla08g01463 Cla-Chr8:27534927 1.40E-111 dispersed
Cla03g01543 Cla-Chr3:31056711 Cla09g02179 Cla-Chr9:39428202 5.25E-09 transposed
Cla02g01800 Cla-Chr2:33016138 Cla09g02179 Cla-Chr9:39428202 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80831 PF00069 Pkinase 9.20E-67 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla09g02179 - - csv:101214068 1130.55